RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 KMT2CQ8NEZ4 4911 aaKnown RBP3.5□□□□□ -1.85
NKRF-204ENST00000542113 Q5VSD8 79 aa3.5□□□□□ -1.85
NKRF-204ENST00000542113 XP32Q5T750 250 aa3.49□□□□□ -1.85
NKRF-204ENST00000542113 CRIPTQ9P021 101 aa3.49□□□□□ -1.85
NKRF-204ENST00000542113 FAT3Q8TDW7 4589 aa3.49□□□□□ -1.85
NKRF-204ENST00000542113 ROMO1P60602 79 aa3.49□□□□□ -1.85
NKRF-204ENST00000542113 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
NKRF-204ENST00000542113 KRTAP3-3Q9BYR6 98 aa3.47□□□□□ -1.85
NKRF-204ENST00000542113 KRTAP3-2Q9BYR7 98 aa3.43□□□□□ -1.86
NKRF-204ENST00000542113 TNXBP22105 4242 aa3.43□□□□□ -1.86
NKRF-204ENST00000542113 RYR2Q92736 4967 aa3.42□□□□□ -1.86
NKRF-204ENST00000542113 A0A0D9SG42 100 aa3.42□□□□□ -1.86
NKRF-204ENST00000542113 HSPG2P98160 4391 aa3.41□□□□□ -1.86
NKRF-204ENST00000542113 TPRXLQ17RH7 258 aa3.4□□□□□ -1.87
NKRF-204ENST00000542113 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.87
NKRF-204ENST00000542113 M0QZ58 72 aa3.39□□□□□ -1.87
NKRF-204ENST00000542113 LPAP08519 4548 aa3.39□□□□□ -1.87
NKRF-204ENST00000542113 P0C880 135 aa3.38□□□□□ -1.87
NKRF-204ENST00000542113 MT1HL1P0DM35 61 aa3.37□□□□□ -1.87
NKRF-204ENST00000542113 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
NKRF-204ENST00000542113 RYR1P21817 5038 aa3.34□□□□□ -1.87
NKRF-204ENST00000542113 LRP2P98164 4655 aa3.33□□□□□ -1.88
NKRF-204ENST00000542113 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
NKRF-204ENST00000542113 RYR3Q15413 4870 aa3.32□□□□□ -1.88
NKRF-204ENST00000542113 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
NKRF-204ENST00000542113 H3BS24 57 aa3.32□□□□□ -1.88
NKRF-204ENST00000542113 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
NKRF-204ENST00000542113 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
NKRF-204ENST00000542113 R4GN34 69 aa3.27□□□□□ -1.89
NKRF-204ENST00000542113 ABCA13Q86UQ4 5058 aa3.27□□□□□ -1.89
NKRF-204ENST00000542113 EPPK1P58107 5090 aaKnown RBP3.26□□□□□ -1.89
NKRF-204ENST00000542113 MUC2Q02817 5179 aa3.26□□□□□ -1.89
NKRF-204ENST00000542113 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
NKRF-204ENST00000542113 KRTAP17-1Q9BYP8 105 aa3.25□□□□□ -1.89
NKRF-204ENST00000542113 KRTAP15-1Q3LI76 137 aa3.2□□□□□ -1.9
NKRF-204ENST00000542113 J3QL48 77 aa3.18□□□□□ -1.9
NKRF-204ENST00000542113 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
NKRF-204ENST00000542113 KRTAP4-5Q9BYR2 181 aa3.13□□□□□ -1.91
NKRF-204ENST00000542113 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
NKRF-204ENST00000542113 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
NKRF-204ENST00000542113 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
NKRF-204ENST00000542113 MUC17Q685J3 4493 aa3.09□□□□□ -1.91
NKRF-204ENST00000542113 LORP23490 312 aaPredicted RBP3.09□□□□□ -1.92
NKRF-204ENST00000542113 PLAC4Q8WY50 150 aa3.08□□□□□ -1.92
NKRF-204ENST00000542113 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
NKRF-204ENST00000542113 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
NKRF-204ENST00000542113 HERC2O95714 4834 aa3.05□□□□□ -1.92
NKRF-204ENST00000542113 HERC1Q15751 4861 aa3.04□□□□□ -1.92
NKRF-204ENST00000542113 KRTAP23-1A1A580 65 aa3.03□□□□□ -1.92
NKRF-204ENST00000542113 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
NKRF-204ENST00000542113 TNP1P09430 55 aa3.02□□□□□ -1.93
NKRF-204ENST00000542113 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
NKRF-204ENST00000542113 FLGP20930 4061 aaPredicted RBP2.98□□□□□ -1.93
NKRF-204ENST00000542113 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
NKRF-204ENST00000542113 LCE2DQ5TA82 110 aaPredicted RBP2.96□□□□□ -1.94
NKRF-204ENST00000542113 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
NKRF-204ENST00000542113 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
NKRF-204ENST00000542113 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
NKRF-204ENST00000542113 UBR4Q5T4S7 5183 aa2.91□□□□□ -1.94
NKRF-204ENST00000542113 HMCN2Q8NDA2 5059 aa2.89□□□□□ -1.95
NKRF-204ENST00000542113 M0R2T5 61 aa2.88□□□□□ -1.95
NKRF-204ENST00000542113 LCE2CQ5TA81 110 aa2.87□□□□□ -1.95
NKRF-204ENST00000542113 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
NKRF-204ENST00000542113 KRTAP19-1Q8IUB9 90 aa2.84□□□□□ -1.95
NKRF-204ENST00000542113 MT1HP80294 61 aa2.81□□□□□ -1.96
NKRF-204ENST00000542113 KRTAP10-10P60014 251 aa2.81□□□□□ -1.96
NKRF-204ENST00000542113 MT2AP02795 61 aa2.78□□□□□ -1.96
NKRF-204ENST00000542113 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
NKRF-204ENST00000542113 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
NKRF-204ENST00000542113 MT1FP04733 61 aa2.77□□□□□ -1.97
NKRF-204ENST00000542113 USH2AO75445 5202 aa2.76□□□□□ -1.97
NKRF-204ENST00000542113 KRTAP8-1Q8IUC2 63 aa2.75□□□□□ -1.97
NKRF-204ENST00000542113 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
NKRF-204ENST00000542113 PRO2289Q9P1D8 64 aa2.7□□□□□ -1.98
NKRF-204ENST00000542113 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
NKRF-204ENST00000542113 MT1BP07438 61 aa2.7□□□□□ -1.98
NKRF-204ENST00000542113 KMT2DO14686 5537 aa2.69□□□□□ -1.98
NKRF-204ENST00000542113 KRTAP10-5P60370 271 aa2.69□□□□□ -1.98
NKRF-204ENST00000542113 MT1XP80297 61 aa2.69□□□□□ -1.98
NKRF-204ENST00000542113 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
NKRF-204ENST00000542113 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.98
NKRF-204ENST00000542113 LOC100996750A0A140TA64 210 aa2.64□□□□□ -1.99
NKRF-204ENST00000542113 KRTAP9-3Q9BYQ3 159 aa2.64□□□□□ -1.99
NKRF-204ENST00000542113 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
NKRF-204ENST00000542113 LCE2BO14633 110 aa2.63□□□□□ -1.99
NKRF-204ENST00000542113 INE1O15225 51 aa2.63□□□□□ -1.99
NKRF-204ENST00000542113 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -2
NKRF-204ENST00000542113 LCE2AQ5TA79 106 aaPredicted RBP2.54□□□□□ -2
NKRF-204ENST00000542113 KRTAP19-4Q3LI73 84 aa2.52□□□□□ -2.01
NKRF-204ENST00000542113 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
NKRF-204ENST00000542113 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
NKRF-204ENST00000542113 KRTAP4-8A0A0G2JLE6 195 aa2.43□□□□□ -2.02
NKRF-204ENST00000542113 KRTAP4-8Q9BYQ9 185 aa2.43□□□□□ -2.02
NKRF-204ENST00000542113 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
NKRF-204ENST00000542113 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
NKRF-204ENST00000542113 KRTAP4-7Q9BYR0 210 aa2.37□□□□□ -2.03
NKRF-204ENST00000542113 FCGBPQ9Y6R7 5405 aaPredicted RBP2.37□□□□□ -2.03
NKRF-204ENST00000542113 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
NKRF-204ENST00000542113 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
NKRF-204ENST00000542113 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms