RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 KRTAP26-1Q6PEX3 210 aa2.41□□□□□ -2.02
CIT-211ENST00000541841 Q6ZRN7 208 aaPredicted RBP2.41□□□□□ -2.02
CIT-211ENST00000541841 DEFB131BA0A096LNP1 70 aa2.4□□□□□ -2.03
CIT-211ENST00000541841 SPRR1BP22528 89 aa2.4□□□□□ -2.03
CIT-211ENST00000541841 COL7A1Q02388 2944 aa2.39□□□□□ -2.03
CIT-211ENST00000541841 A6NN06 94 aa2.39□□□□□ -2.03
CIT-211ENST00000541841 CNBPP62633 177 aaKnown RBP2.39□□□□□ -2.03
CIT-211ENST00000541841 MIR22HGQ0VDD5 57 aa2.39□□□□□ -2.03
CIT-211ENST00000541841 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
CIT-211ENST00000541841 STAB2Q8WWQ8 2551 aa2.38□□□□□ -2.03
CIT-211ENST00000541841 ACYP2P14621 99 aa2.38□□□□□ -2.03
CIT-211ENST00000541841 TENM2Q9NT68 2774 aa2.38□□□□□ -2.03
CIT-211ENST00000541841 EPPK1P58107 5090 aaKnown RBP2.37□□□□□ -2.03
CIT-211ENST00000541841 MMP24-AS1A0A0U1RRL7 71 aa2.37□□□□□ -2.03
CIT-211ENST00000541841 LINC00472Q9H8W2 130 aa2.37□□□□□ -2.03
CIT-211ENST00000541841 PRLHP81277 87 aa2.36□□□□□ -2.03
CIT-211ENST00000541841 SPAG11AQ6PDA7 123 aa2.36□□□□□ -2.03
CIT-211ENST00000541841 MRPL34Q9BQ48 92 aaKnown RBP2.36□□□□□ -2.03
CIT-211ENST00000541841 PCOTHQ58A44 107 aa2.35□□□□□ -2.03
CIT-211ENST00000541841 PLAC8Q9NZF1 115 aa2.35□□□□□ -2.03
CIT-211ENST00000541841 RYR2Q92736 4967 aa2.35□□□□□ -2.03
CIT-211ENST00000541841 A0A1B0GU69 56 aa2.34□□□□□ -2.03
CIT-211ENST00000541841 UBE2DNLQ8IWF7 75 aa2.34□□□□□ -2.03
CIT-211ENST00000541841 DNAH3Q8TD57 4116 aa2.33□□□□□ -2.04
CIT-211ENST00000541841 A0A096LNI7 61 aa2.33□□□□□ -2.04
CIT-211ENST00000541841 K7EIL1 84 aa2.33□□□□□ -2.04
CIT-211ENST00000541841 UQCR11O14957 56 aa2.33□□□□□ -2.04
CIT-211ENST00000541841 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
CIT-211ENST00000541841 PCLOQ9Y6V0 5065 aa2.32□□□□□ -2.04
CIT-211ENST00000541841 RYR1P21817 5038 aa2.31□□□□□ -2.04
CIT-211ENST00000541841 HYDINQ4G0P3 5121 aa2.31□□□□□ -2.04
CIT-211ENST00000541841 DNAH9Q9NYC9 4486 aa2.3□□□□□ -2.04
CIT-211ENST00000541841 SPINK7P58062 85 aa2.3□□□□□ -2.04
CIT-211ENST00000541841 DMAC1Q96GE9 116 aa2.3□□□□□ -2.04
CIT-211ENST00000541841 DYNC2H1Q8NCM8 4307 aaKnown RBP2.29□□□□□ -2.04
CIT-211ENST00000541841 SPATA8Q6RVD6 105 aa2.29□□□□□ -2.04
CIT-211ENST00000541841 SACSQ9NZJ4 4579 aa2.29□□□□□ -2.04
CIT-211ENST00000541841 DNAH1Q9P2D7 4330 aa2.28□□□□□ -2.04
CIT-211ENST00000541841 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
CIT-211ENST00000541841 Q96NJ1 140 aa2.28□□□□□ -2.04
CIT-211ENST00000541841 CSMD3Q7Z407 3707 aa2.28□□□□□ -2.05
CIT-211ENST00000541841 HERC2O95714 4834 aa2.27□□□□□ -2.05
CIT-211ENST00000541841 DNAH7Q8WXX0 4024 aa2.27□□□□□ -2.05
CIT-211ENST00000541841 SSBP3-AS1Q7Z2R9 100 aa2.27□□□□□ -2.05
CIT-211ENST00000541841 KRTAP13-1Q8IUC0 172 aa2.27□□□□□ -2.05
CIT-211ENST00000541841 LYSTQ99698 3801 aa2.27□□□□□ -2.05
CIT-211ENST00000541841 NUPR2A6NF83 97 aa2.25□□□□□ -2.05
CIT-211ENST00000541841 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
CIT-211ENST00000541841 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
CIT-211ENST00000541841 SPINK6Q6UWN8 80 aa2.25□□□□□ -2.05
CIT-211ENST00000541841 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
CIT-211ENST00000541841 CSAG1Q6PB30 78 aa2.24□□□□□ -2.05
CIT-211ENST00000541841 FRAS1Q86XX4 4008 aa2.24□□□□□ -2.05
CIT-211ENST00000541841 HUWE1Q7Z6Z7 4374 aaKnown RBP2.23□□□□□ -2.05
CIT-211ENST00000541841 NBDYA0A0U1RRE5 68 aa2.23□□□□□ -2.05
CIT-211ENST00000541841 LY6G6CO95867 125 aa2.23□□□□□ -2.05
CIT-211ENST00000541841 KIAA1109Q2LD37 5005 aa2.22□□□□□ -2.05
CIT-211ENST00000541841 APLNQ9ULZ1 77 aa2.21□□□□□ -2.06
CIT-211ENST00000541841 ABCA13Q86UQ4 5058 aa2.19□□□□□ -2.06
CIT-211ENST00000541841 PLECQ15149 4684 aaKnown RBP2.19□□□□□ -2.06
CIT-211ENST00000541841 INE1O15225 51 aa2.19□□□□□ -2.06
CIT-211ENST00000541841 KMT2AQ03164 3969 aa2.19□□□□□ -2.06
CIT-211ENST00000541841 HECTD4Q9Y4D8 3996 aa2.18□□□□□ -2.06
CIT-211ENST00000541841 A0A087WTM6 91 aa2.18□□□□□ -2.06
CIT-211ENST00000541841 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
CIT-211ENST00000541841 PKHD1P08F94 4074 aa2.16□□□□□ -2.06
CIT-211ENST00000541841 HERC1Q15751 4861 aa2.16□□□□□ -2.06
CIT-211ENST00000541841 SPINK1P00995 79 aa2.16□□□□□ -2.06
CIT-211ENST00000541841 RPS29P62273 56 aaKnown RBP2.16□□□□□ -2.06
CIT-211ENST00000541841 SRRM2Q9UQ35 2752 aaKnown RBP2.15□□□□□ -2.06
CIT-211ENST00000541841 DNAH10Q8IVF4 4471 aa2.14□□□□□ -2.07
CIT-211ENST00000541841 DMBT1Q9UGM3 2413 aaPredicted RBP2.13□□□□□ -2.07
CIT-211ENST00000541841 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
CIT-211ENST00000541841 UBR4Q5T4S7 5183 aa2.12□□□□□ -2.07
CIT-211ENST00000541841 COX6B2Q6YFQ2 88 aa2.12□□□□□ -2.07
CIT-211ENST00000541841 VPS13DQ5THJ4 4388 aa2.12□□□□□ -2.07
CIT-211ENST00000541841 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
CIT-211ENST00000541841 DNAH2Q9P225 4427 aa2.1□□□□□ -2.07
CIT-211ENST00000541841 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
CIT-211ENST00000541841 H0YAA0 97 aa2.1□□□□□ -2.07
CIT-211ENST00000541841 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
CIT-211ENST00000541841 Q6ZSA8 131 aa2.1□□□□□ -2.07
CIT-211ENST00000541841 DNAH11Q96DT5 4516 aa2.09□□□□□ -2.07
CIT-211ENST00000541841 RPL37P61927 97 aaKnown RBP2.09□□□□□ -2.07
CIT-211ENST00000541841 HSPG2P98160 4391 aa2.09□□□□□ -2.07
CIT-211ENST00000541841 CRIPTQ9P021 101 aa2.08□□□□□ -2.08
CIT-211ENST00000541841 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
CIT-211ENST00000541841 PKD1P98161 4303 aa2.07□□□□□ -2.08
CIT-211ENST00000541841 DNAH6Q9C0G6 4158 aa2.07□□□□□ -2.08
CIT-211ENST00000541841 DNAH17Q9UFH2 4485 aa2.06□□□□□ -2.08
CIT-211ENST00000541841 APOBP04114 4563 aaKnown RBP2.06□□□□□ -2.08
CIT-211ENST00000541841 MYCBP2O75592 4640 aa2.05□□□□□ -2.08
CIT-211ENST00000541841 FLG2Q5D862 2391 aaPredicted RBP2.05□□□□□ -2.08
CIT-211ENST00000541841 LRP1BQ9NZR2 4599 aa2.04□□□□□ -2.08
CIT-211ENST00000541841 DNAH5Q8TE73 4624 aa2.03□□□□□ -2.08
CIT-211ENST00000541841 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
CIT-211ENST00000541841 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
CIT-211ENST00000541841 FAT1Q14517 4588 aa2□□□□□ -2.09
CIT-211ENST00000541841 C9orf92A6NGG3 77 aa2□□□□□ -2.09
CIT-211ENST00000541841 S4R3F8 94 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms