RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 HIST2H2BEQ16778 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-214ENST00000540865 Q6ZQT0 140 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 TMEM254Q8TBM7 123 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BHQ93079 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BNQ99877 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 HIST1H2BMQ99879 126 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 MRPL34Q9BQ48 92 aaKnown RBP1.88□□□□□ -2.11
SNHG1-214ENST00000540865 VPS25Q9BRG1 176 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 ORMDL1Q9P0S3 153 aa1.88□□□□□ -2.11
SNHG1-214ENST00000540865 A0A0B4J2C4 111 aa1.87□□□□□ -2.11
SNHG1-214ENST00000540865 DNAL4O96015 105 aa1.87□□□□□ -2.11
SNHG1-214ENST00000540865 COA6Q5JTJ3 125 aaKnown RBP1.87□□□□□ -2.11
SNHG1-214ENST00000540865 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SNHG1-214ENST00000540865 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
SNHG1-214ENST00000540865 K7EQZ3 153 aa1.86□□□□□ -2.11
SNHG1-214ENST00000540865 NDUFS5O43920 106 aa1.86□□□□□ -2.11
SNHG1-214ENST00000540865 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
SNHG1-214ENST00000540865 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
SNHG1-214ENST00000540865 MMP24-AS1A0A0U1RRL7 71 aa1.85□□□□□ -2.11
SNHG1-214ENST00000540865 hDV103S1A0JD37 113 aa1.85□□□□□ -2.11
SNHG1-214ENST00000540865 HSBP1L1C9JCN9 74 aa1.85□□□□□ -2.11
SNHG1-214ENST00000540865 RBM3P98179 157 aaKnown RBP1.85□□□□□ -2.11
SNHG1-214ENST00000540865 Q5W150 140 aa1.85□□□□□ -2.11
SNHG1-214ENST00000540865 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
SNHG1-214ENST00000540865 C1orf64Q8NEQ6 169 aa1.84□□□□□ -2.11
SNHG1-214ENST00000540865 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
SNHG1-214ENST00000540865 PRO1854Q9UHT4 67 aa1.84□□□□□ -2.11
SNHG1-214ENST00000540865 A0A1B0GW54 56 aa1.83□□□□□ -2.12
SNHG1-214ENST00000540865 C9JAW5 83 aa1.83□□□□□ -2.12
SNHG1-214ENST00000540865 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
SNHG1-214ENST00000540865 A8MUN3 132 aa1.82□□□□□ -2.12
SNHG1-214ENST00000540865 DLEU1O43261 78 aa1.81□□□□□ -2.12
SNHG1-214ENST00000540865 COX8AP10176 69 aa1.81□□□□□ -2.12
SNHG1-214ENST00000540865 H0YAA0 97 aa1.8□□□□□ -2.12
SNHG1-214ENST00000540865 COX6CP09669 75 aa1.8□□□□□ -2.12
SNHG1-214ENST00000540865 PDE6GP18545 87 aa1.8□□□□□ -2.12
SNHG1-214ENST00000540865 HIST3H2BBQ8N257 126 aa1.8□□□□□ -2.12
SNHG1-214ENST00000540865 HIGD1BQ9P298 99 aa1.8□□□□□ -2.12
SNHG1-214ENST00000540865 MT4P47944 62 aa1.79□□□□□ -2.12
SNHG1-214ENST00000540865 PSMB2P49721 201 aa1.79□□□□□ -2.12
SNHG1-214ENST00000540865 NREPQ16612 68 aa1.79□□□□□ -2.12
SNHG1-214ENST00000540865 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
SNHG1-214ENST00000540865 LOC110117498A0A087WWA1 95 aa1.78□□□□□ -2.12
SNHG1-214ENST00000540865 HCG22E2RYF7 251 aa1.78□□□□□ -2.12
SNHG1-214ENST00000540865 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
SNHG1-214ENST00000540865 BAALC-AS2P0C853 105 aa1.77□□□□□ -2.13
SNHG1-214ENST00000540865 FXYD2P54710 66 aa1.77□□□□□ -2.13
SNHG1-214ENST00000540865 HIST1H2BLQ99880 126 aa1.77□□□□□ -2.13
SNHG1-214ENST00000540865 CASC2Q6XLA1 102 aa1.76□□□□□ -2.13
SNHG1-214ENST00000540865 C14orf144Q96I85 54 aa1.76□□□□□ -2.13
SNHG1-214ENST00000540865 A0A087WVE0 104 aa1.75□□□□□ -2.13
SNHG1-214ENST00000540865 SPRR5A0A1B0GTR4 108 aa1.75□□□□□ -2.13
SNHG1-214ENST00000540865 ADM2Q7Z4H4 148 aa1.75□□□□□ -2.13
SNHG1-214ENST00000540865 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
SNHG1-214ENST00000540865 NDUFC1O43677 76 aa1.74□□□□□ -2.13
SNHG1-214ENST00000540865 S100A2P29034 98 aa1.74□□□□□ -2.13
SNHG1-214ENST00000540865 R4GN34 69 aa1.74□□□□□ -2.13
SNHG1-214ENST00000540865 K7ERJ3 54 aa1.73□□□□□ -2.13
SNHG1-214ENST00000540865 BPY2O14599 106 aa1.73□□□□□ -2.13
SNHG1-214ENST00000540865 SCGB1C2P0DMR2 95 aa1.73□□□□□ -2.13
SNHG1-214ENST00000540865 CYSTM1Q9H1C7 97 aa1.73□□□□□ -2.13
SNHG1-214ENST00000540865 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
SNHG1-214ENST00000540865 PP632Q6XCG6 107 aa1.72□□□□□ -2.13
SNHG1-214ENST00000540865 C14orf132Q9NPU4 83 aa1.72□□□□□ -2.13
SNHG1-214ENST00000540865 MT1EP04732 61 aa1.71□□□□□ -2.14
SNHG1-214ENST00000540865 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
SNHG1-214ENST00000540865 SPATA45Q537H7 98 aa1.71□□□□□ -2.14
SNHG1-214ENST00000540865 M0QZ58 72 aa1.7□□□□□ -2.14
SNHG1-214ENST00000540865 HSD52Q0P140 79 aa1.7□□□□□ -2.14
SNHG1-214ENST00000540865 ATXN8Q156A1 80 aa1.7□□□□□ -2.14
SNHG1-214ENST00000540865 C20orf197Q8N268 126 aa1.7□□□□□ -2.14
SNHG1-214ENST00000540865 NAA38Q9BRA0 125 aaKnown RBP1.7□□□□□ -2.14
SNHG1-214ENST00000540865 VAMP8Q9BV40 100 aa1.7□□□□□ -2.14
SNHG1-214ENST00000540865 CYP4F30PQ9H0H9 118 aa1.69□□□□□ -2.14
SNHG1-214ENST00000540865 TP53AIP1Q9HCN2 124 aa1.69□□□□□ -2.14
SNHG1-214ENST00000540865 P0C880 135 aa1.68□□□□□ -2.14
SNHG1-214ENST00000540865 MT1GP13640 62 aa1.68□□□□□ -2.14
SNHG1-214ENST00000540865 LINC01554Q52M75 96 aa1.68□□□□□ -2.14
SNHG1-214ENST00000540865 SMIM26A0A096LP01 95 aa1.67□□□□□ -2.14
SNHG1-214ENST00000540865 S100A6P06703 90 aa1.66□□□□□ -2.14
SNHG1-214ENST00000540865 LOC101927531A0A1B0GV80 90 aa1.65□□□□□ -2.15
SNHG1-214ENST00000540865 K7EP34 96 aa1.65□□□□□ -2.15
SNHG1-214ENST00000540865 ACYP1P07311 99 aa1.65□□□□□ -2.15
SNHG1-214ENST00000540865 S100A1P23297 94 aa1.65□□□□□ -2.15
SNHG1-214ENST00000540865 TRAV22A0A0B4J277 110 aa1.64□□□□□ -2.15
SNHG1-214ENST00000540865 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
SNHG1-214ENST00000540865 MT1MQ8N339 61 aa1.64□□□□□ -2.15
SNHG1-214ENST00000540865 BATFQ16520 125 aa1.63□□□□□ -2.15
SNHG1-214ENST00000540865 MT-ATP8P03928 68 aa1.61□□□□□ -2.15
SNHG1-214ENST00000540865 SPANXA2-OT1Q8N9U9 137 aa1.61□□□□□ -2.15
SNHG1-214ENST00000540865 PSPHP1O15172 72 aa1.6□□□□□ -2.15
SNHG1-214ENST00000540865 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
SNHG1-214ENST00000540865 UBL5Q9BZL1 73 aa1.6□□□□□ -2.15
SNHG1-214ENST00000540865 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.15
SNHG1-214ENST00000540865 TSTD3H0UI37 97 aa1.59□□□□□ -2.15
SNHG1-214ENST00000540865 H3BT86 120 aa1.59□□□□□ -2.15
SNHG1-214ENST00000540865 MT1LQ93083 61 aa1.59□□□□□ -2.15
SNHG1-214ENST00000540865 UQCR10Q9UDW1 63 aa1.59□□□□□ -2.15
SNHG1-214ENST00000540865 A0A1W2PPM0 123 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms