RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 FAM208AQ9UK61 1670 aaKnown RBP-0.33□□□□□ -2.46
MDM2-227ENST00000540709 PREX2Q70Z35 1606 aa-0.33□□□□□ -2.46
MDM2-227ENST00000540709 DNAH3Q8TD57 4116 aa-0.33□□□□□ -2.46
MDM2-227ENST00000540709 MUC17Q685J3 4493 aa-0.33□□□□□ -2.46
MDM2-227ENST00000540709 USH2AO75445 5202 aa-0.33□□□□□ -2.46
MDM2-227ENST00000540709 USP9YO00507 2555 aaPredicted RBP-0.34□□□□□ -2.46
MDM2-227ENST00000540709 ITPR3Q14573 2671 aa-0.34□□□□□ -2.46
MDM2-227ENST00000540709 DEFB131AP59861 70 aa-0.34□□□□□ -2.46
MDM2-227ENST00000540709 DNAH11Q96DT5 4516 aa-0.34□□□□□ -2.46
MDM2-227ENST00000540709 SPENQ96T58 3664 aaKnown RBP-0.34□□□□□ -2.46
MDM2-227ENST00000540709 SACSQ9NZJ4 4579 aa-0.35□□□□□ -2.46
MDM2-227ENST00000540709 POLR2KP53803 58 aaKnown RBP-0.35□□□□□ -2.47
MDM2-227ENST00000540709 SMIM2Q9BVW6 85 aa-0.35□□□□□ -2.47
MDM2-227ENST00000540709 CMC2Q9NRP2 79 aa-0.35□□□□□ -2.47
MDM2-227ENST00000540709 AGLP35573 1532 aa-0.35□□□□□ -2.47
MDM2-227ENST00000540709 RELNP78509 3460 aa-0.35□□□□□ -2.47
MDM2-227ENST00000540709 RIF1Q5UIP0 2472 aaKnown RBP-0.36□□□□□ -2.47
MDM2-227ENST00000540709 MT1XP80297 61 aa-0.36□□□□□ -2.47
MDM2-227ENST00000540709 KIF21BO75037 1637 aa-0.36□□□□□ -2.47
MDM2-227ENST00000540709 CELSR3Q9NYQ7 3312 aa-0.36□□□□□ -2.47
MDM2-227ENST00000540709 EPPK1P58107 5090 aaKnown RBP-0.37□□□□□ -2.47
MDM2-227ENST00000540709 TLN2Q9Y4G6 2542 aa-0.37□□□□□ -2.47
MDM2-227ENST00000540709 COL6A5A8TX70 2615 aa-0.37□□□□□ -2.47
MDM2-227ENST00000540709 LMO7Q8WWI1 1683 aa-0.37□□□□□ -2.47
MDM2-227ENST00000540709 COL12A1Q99715 3063 aa-0.37□□□□□ -2.47
MDM2-227ENST00000540709 ERICH3Q5RHP9 1530 aa-0.38□□□□□ -2.47
MDM2-227ENST00000540709 SPTBN5Q9NRC6 3674 aaKnown RBP-0.38□□□□□ -2.47
MDM2-227ENST00000540709 MT1EP04732 61 aa-0.38□□□□□ -2.47
MDM2-227ENST00000540709 HYDINQ4G0P3 5121 aa-0.38□□□□□ -2.47
MDM2-227ENST00000540709 SYCP2Q9BX26 1530 aa-0.38□□□□□ -2.47
MDM2-227ENST00000540709 LAMA3Q16787 3333 aa-0.39□□□□□ -2.47
MDM2-227ENST00000540709 SRCAPQ6ZRS2 3230 aa-0.39□□□□□ -2.47
MDM2-227ENST00000540709 DNAH1Q9P2D7 4330 aa-0.39□□□□□ -2.47
MDM2-227ENST00000540709 USP9XQ93008 2570 aaPredicted RBP-0.39□□□□□ -2.47
MDM2-227ENST00000540709 DNAH2Q9P225 4427 aa-0.4□□□□□ -2.47
MDM2-227ENST00000540709 MT1LQ93083 61 aa-0.4□□□□□ -2.47
MDM2-227ENST00000540709 ADCY10Q96PN6 1610 aa-0.4□□□□□ -2.47
MDM2-227ENST00000540709 NEBP20929 6669 aa-0.41□□□□□ -2.47
MDM2-227ENST00000540709 FRYQ5TBA9 3013 aa-0.41□□□□□ -2.47
MDM2-227ENST00000540709 PLECQ15149 4684 aaKnown RBP-0.41□□□□□ -2.47
MDM2-227ENST00000540709 MROH2AA6NES4 1674 aa-0.41□□□□□ -2.48
MDM2-227ENST00000540709 ABCC8Q09428 1581 aa-0.41□□□□□ -2.48
MDM2-227ENST00000540709 BIRC6Q9NR09 4857 aa-0.41□□□□□ -2.48
MDM2-227ENST00000540709 RYR1P21817 5038 aa-0.41□□□□□ -2.48
MDM2-227ENST00000540709 C5orf42Q9H799 3197 aa-0.41□□□□□ -2.48
MDM2-227ENST00000540709 DDX60Q8IY21 1712 aaKnown RBP-0.41□□□□□ -2.48
MDM2-227ENST00000540709 ABCA5Q8WWZ7 1642 aa-0.42□□□□□ -2.48
MDM2-227ENST00000540709 LAMA2P24043 3122 aaKnown RBP-0.42□□□□□ -2.48
MDM2-227ENST00000540709 ITPR1Q14643 2758 aa-0.42□□□□□ -2.48
MDM2-227ENST00000540709 LEAP2Q969E1 77 aa-0.42□□□□□ -2.48
MDM2-227ENST00000540709 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.42□□□□□ -2.48
MDM2-227ENST00000540709 ADGRG4Q8IZF6 3080 aa-0.43□□□□□ -2.48
MDM2-227ENST00000540709 SNRPGP15A8MWD9 76 aa-0.43□□□□□ -2.48
MDM2-227ENST00000540709 DNAH8Q96JB1 4490 aa-0.43□□□□□ -2.48
MDM2-227ENST00000540709 NIPBLQ6KC79 2804 aaeCLIP-0.43□□□□□ -2.48
MDM2-227ENST00000540709 NDUFA1O15239 70 aa-0.44□□□□□ -2.48
MDM2-227ENST00000540709 DEFB4AO15263 64 aa-0.44□□□□□ -2.48
MDM2-227ENST00000540709 MT1HL1P0DM35 61 aa-0.44□□□□□ -2.48
MDM2-227ENST00000540709 DNHD1Q96M86 4753 aa-0.44□□□□□ -2.48
MDM2-227ENST00000540709 FANCD2Q9BXW9 1451 aa-0.44□□□□□ -2.48
MDM2-227ENST00000540709 SPTAN1Q13813 2472 aaKnown RBP-0.44□□□□□ -2.48
MDM2-227ENST00000540709 MT1GP13640 62 aa-0.45□□□□□ -2.48
MDM2-227ENST00000540709 CHD7Q9P2D1 2997 aa-0.45□□□□□ -2.48
MDM2-227ENST00000540709 TRPM2O94759 1503 aa-0.45□□□□□ -2.48
MDM2-227ENST00000540709 CSMD1Q96PZ7 3565 aa-0.45□□□□□ -2.48
MDM2-227ENST00000540709 TEX15Q9BXT5 2789 aa-0.45□□□□□ -2.48
MDM2-227ENST00000540709 MGAQ8IWI9 3026 aa-0.46□□□□□ -2.48
MDM2-227ENST00000540709 NFAT5O94916 1531 aa-0.46□□□□□ -2.48
MDM2-227ENST00000540709 CMYA5Q8N3K9 4069 aa-0.46□□□□□ -2.48
MDM2-227ENST00000540709 DEFB136Q30KP8 78 aa-0.46□□□□□ -2.48
MDM2-227ENST00000540709 CLTCL1P53675 1640 aa-0.46□□□□□ -2.48
MDM2-227ENST00000540709 NRXN3Q9Y4C0 1643 aa-0.46□□□□□ -2.48
MDM2-227ENST00000540709 IQGAP1P46940 1657 aa-0.46□□□□□ -2.48
MDM2-227ENST00000540709 LRBAP50851 2863 aa-0.47□□□□□ -2.48
MDM2-227ENST00000540709 DNAH7Q8WXX0 4024 aa-0.47□□□□□ -2.48
MDM2-227ENST00000540709 RNF213Q63HN8 5207 aa-0.47□□□□□ -2.48
MDM2-227ENST00000540709 RYR3Q15413 4870 aa-0.48□□□□□ -2.49
MDM2-227ENST00000540709 TOMM7Q9P0U1 55 aa-0.48□□□□□ -2.49
MDM2-227ENST00000540709 DOPEY1Q5JWR5 2465 aa-0.48□□□□□ -2.49
MDM2-227ENST00000540709 KIAA1109Q2LD37 5005 aa-0.48□□□□□ -2.49
MDM2-227ENST00000540709 MYO9AB2RTY4 2548 aa-0.48□□□□□ -2.49
MDM2-227ENST00000540709 DYNC1H1Q14204 4646 aaKnown RBP-0.49□□□□□ -2.49
MDM2-227ENST00000540709 EYSQ5T1H1 3165 aa-0.49□□□□□ -2.49
MDM2-227ENST00000540709 ZFHX4Q86UP3 3567 aa-0.5□□□□□ -2.49
MDM2-227ENST00000540709 MT2AP02795 61 aa-0.5□□□□□ -2.49
MDM2-227ENST00000540709 MT1MQ8N339 61 aa-0.5□□□□□ -2.49
MDM2-227ENST00000540709 TOMM5Q8N4H5 51 aa-0.5□□□□□ -2.49
MDM2-227ENST00000540709 DNAH17Q9UFH2 4485 aa-0.5□□□□□ -2.49
MDM2-227ENST00000540709 RYR2Q92736 4967 aa-0.5□□□□□ -2.49
MDM2-227ENST00000540709 DNAH10Q8IVF4 4471 aa-0.52□□□□□ -2.49
MDM2-227ENST00000540709 CFAP46Q8IYW2 2715 aa-0.52□□□□□ -2.49
MDM2-227ENST00000540709 RPS29P62273 56 aaKnown RBP-0.55□□□□□ -2.5
MDM2-227ENST00000540709 LINC01590Q5TEZ4 76 aa-0.55□□□□□ -2.5
MDM2-227ENST00000540709 CSMD2Q7Z408 3487 aa-0.55□□□□□ -2.5
MDM2-227ENST00000540709 RPL39P62891 51 aaKnown RBP-0.56□□□□□ -2.5
MDM2-227ENST00000540709 CRYBG3Q68DQ2 2970 aa-0.56□□□□□ -2.5
MDM2-227ENST00000540709 SMG1Q96Q15 3661 aaKnown RBP-0.57□□□□□ -2.5
MDM2-227ENST00000540709 CEP295Q9C0D2 2601 aa-0.57□□□□□ -2.5
MDM2-227ENST00000540709 RHPN1-AS1Q9BWJ2 59 aa-0.57□□□□□ -2.5
MDM2-227ENST00000540709 DMXL2Q8TDJ6 3036 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 309.5 ms