RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.42
DNMT1-203ENST00000540357 DNAH8Q96JB1 4490 aa6.19□□□□□ -1.42
DNMT1-203ENST00000540357 ANK2Q01484 3957 aa6.18□□□□□ -1.42
DNMT1-203ENST00000540357 DYNC2H1Q8NCM8 4307 aaKnown RBP6.13□□□□□ -1.43
DNMT1-203ENST00000540357 DNAH2Q9P225 4427 aa6.09□□□□□ -1.43
DNMT1-203ENST00000540357 DNAH11Q96DT5 4516 aa6.05□□□□□ -1.44
DNMT1-203ENST00000540357 STARD9Q9P2P6 4700 aa6□□□□□ -1.45
DNMT1-203ENST00000540357 MT1HL1P0DM35 61 aa5.99□□□□□ -1.45
DNMT1-203ENST00000540357 DNAH5Q8TE73 4624 aa5.95□□□□□ -1.46
DNMT1-203ENST00000540357 FRAS1Q86XX4 4008 aa5.93□□□□□ -1.46
DNMT1-203ENST00000540357 HECTD4Q9Y4D8 3996 aa5.91□□□□□ -1.46
DNMT1-203ENST00000540357 LRP1BQ9NZR2 4599 aa5.9□□□□□ -1.46
DNMT1-203ENST00000540357 DNAH7Q8WXX0 4024 aa5.89□□□□□ -1.47
DNMT1-203ENST00000540357 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
DNMT1-203ENST00000540357 LYSTQ99698 3801 aa5.86□□□□□ -1.47
DNMT1-203ENST00000540357 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
DNMT1-203ENST00000540357 DNAH6Q9C0G6 4158 aa5.85□□□□□ -1.47
DNMT1-203ENST00000540357 PRKDCP78527 4128 aaKnown RBP5.85□□□□□ -1.47
DNMT1-203ENST00000540357 KMT2AQ03164 3969 aa5.84□□□□□ -1.47
DNMT1-203ENST00000540357 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
DNMT1-203ENST00000540357 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
DNMT1-203ENST00000540357 VPS13BQ7Z7G8 4022 aa5.79□□□□□ -1.48
DNMT1-203ENST00000540357 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
DNMT1-203ENST00000540357 DYNC1H1Q14204 4646 aaKnown RBP5.74□□□□□ -1.49
DNMT1-203ENST00000540357 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
DNMT1-203ENST00000540357 INE1O15225 51 aa5.69□□□□□ -1.5
DNMT1-203ENST00000540357 FAT2Q9NYQ8 4349 aa5.68□□□□□ -1.5
DNMT1-203ENST00000540357 FAT1Q14517 4588 aa5.65□□□□□ -1.51
DNMT1-203ENST00000540357 PKD1P98161 4303 aa5.53□□□□□ -1.52
DNMT1-203ENST00000540357 APOBP04114 4563 aaKnown RBP5.52□□□□□ -1.53
DNMT1-203ENST00000540357 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
DNMT1-203ENST00000540357 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
DNMT1-203ENST00000540357 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
DNMT1-203ENST00000540357 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.53
DNMT1-203ENST00000540357 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
DNMT1-203ENST00000540357 PKHD1L1Q86WI1 4243 aa5.42□□□□□ -1.54
DNMT1-203ENST00000540357 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
DNMT1-203ENST00000540357 HYDINQ4G0P3 5121 aa5.37□□□□□ -1.55
DNMT1-203ENST00000540357 LRP1Q07954 4544 aaKnown RBP5.32□□□□□ -1.56
DNMT1-203ENST00000540357 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
DNMT1-203ENST00000540357 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
DNMT1-203ENST00000540357 PKHD1P08F94 4074 aa5.3□□□□□ -1.56
DNMT1-203ENST00000540357 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
DNMT1-203ENST00000540357 RYR1P21817 5038 aa5.22□□□□□ -1.57
DNMT1-203ENST00000540357 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.58
DNMT1-203ENST00000540357 RYR2Q92736 4967 aa5.2□□□□□ -1.58
DNMT1-203ENST00000540357 TNXBP22105 4242 aa5.19□□□□□ -1.58
DNMT1-203ENST00000540357 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
DNMT1-203ENST00000540357 KIAA1109Q2LD37 5005 aa5.15□□□□□ -1.59
DNMT1-203ENST00000540357 BIRC6Q9NR09 4857 aa5.12□□□□□ -1.59
DNMT1-203ENST00000540357 HSPG2P98160 4391 aa5.11□□□□□ -1.59
DNMT1-203ENST00000540357 RYR3Q15413 4870 aa5.1□□□□□ -1.59
DNMT1-203ENST00000540357 MT1HP80294 61 aa5.09□□□□□ -1.59
DNMT1-203ENST00000540357 MT2AP02795 61 aa5.09□□□□□ -1.6
DNMT1-203ENST00000540357 LRP2P98164 4655 aa5.07□□□□□ -1.6
DNMT1-203ENST00000540357 KRTAP19-1Q8IUB9 90 aa5.04□□□□□ -1.6
DNMT1-203ENST00000540357 MT1FP04733 61 aa5.03□□□□□ -1.6
DNMT1-203ENST00000540357 KMT2CQ8NEZ4 4911 aaKnown RBP5□□□□□ -1.61
DNMT1-203ENST00000540357 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.62
DNMT1-203ENST00000540357 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
DNMT1-203ENST00000540357 HERC2O95714 4834 aa4.94□□□□□ -1.62
DNMT1-203ENST00000540357 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
DNMT1-203ENST00000540357 LPAP08519 4548 aa4.9□□□□□ -1.62
DNMT1-203ENST00000540357 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
DNMT1-203ENST00000540357 MT1XP80297 61 aa4.85□□□□□ -1.63
DNMT1-203ENST00000540357 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
DNMT1-203ENST00000540357 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
DNMT1-203ENST00000540357 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
DNMT1-203ENST00000540357 EPPK1P58107 5090 aaKnown RBP4.81□□□□□ -1.64
DNMT1-203ENST00000540357 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
DNMT1-203ENST00000540357 HERC1Q15751 4861 aa4.79□□□□□ -1.64
DNMT1-203ENST00000540357 MT1BP07438 61 aa4.79□□□□□ -1.64
DNMT1-203ENST00000540357 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
DNMT1-203ENST00000540357 MUC17Q685J3 4493 aa4.78□□□□□ -1.64
DNMT1-203ENST00000540357 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
DNMT1-203ENST00000540357 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
DNMT1-203ENST00000540357 PCLOQ9Y6V0 5065 aa4.63□□□□□ -1.67
DNMT1-203ENST00000540357 ABCA13Q86UQ4 5058 aa4.61□□□□□ -1.67
DNMT1-203ENST00000540357 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
DNMT1-203ENST00000540357 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
DNMT1-203ENST00000540357 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
DNMT1-203ENST00000540357 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
DNMT1-203ENST00000540357 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
DNMT1-203ENST00000540357 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
DNMT1-203ENST00000540357 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
DNMT1-203ENST00000540357 MT1LQ93083 61 aa4.33□□□□□ -1.72
DNMT1-203ENST00000540357 LCE2BO14633 110 aa4.32□□□□□ -1.72
DNMT1-203ENST00000540357 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
DNMT1-203ENST00000540357 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
DNMT1-203ENST00000540357 MT1GP13640 62 aa4.29□□□□□ -1.72
DNMT1-203ENST00000540357 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
DNMT1-203ENST00000540357 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
DNMT1-203ENST00000540357 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
DNMT1-203ENST00000540357 RNF213Q63HN8 5207 aa4.28□□□□□ -1.72
DNMT1-203ENST00000540357 MT1EP04732 61 aa4.27□□□□□ -1.73
DNMT1-203ENST00000540357 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
DNMT1-203ENST00000540357 FAT4Q6V0I7 4981 aa4.2□□□□□ -1.74
DNMT1-203ENST00000540357 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
DNMT1-203ENST00000540357 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
DNMT1-203ENST00000540357 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms