RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 MMP24-AS1A0A0U1RRL7 71 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 H0YGX0 51 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 NDUFS5O43920 106 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 KRTAP20-2Q3LI61 65 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 CLLU1Q5K131 121 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 PET117Q6UWS5 81 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 C1orf64Q8NEQ6 169 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 TMEM254Q8TBM7 123 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 VPS25Q9BRG1 176 aa1.43□□□□□ -2.18
C2CD3-214ENST00000540057 A0A1B0GX51 115 aa1.42□□□□□ -2.18
C2CD3-214ENST00000540057 H0YAA0 97 aa1.42□□□□□ -2.18
C2CD3-214ENST00000540057 A0A087WVE0 104 aa1.41□□□□□ -2.18
C2CD3-214ENST00000540057 MT1GP13640 62 aa1.41□□□□□ -2.18
C2CD3-214ENST00000540057 Q6ZQT0 140 aa1.41□□□□□ -2.18
C2CD3-214ENST00000540057 hDV103S1A0JD37 113 aa1.4□□□□□ -2.19
C2CD3-214ENST00000540057 ATOH7Q8N100 152 aa1.4□□□□□ -2.19
C2CD3-214ENST00000540057 ADM2Q7Z4H4 148 aa1.39□□□□□ -2.19
C2CD3-214ENST00000540057 MT1MQ8N339 61 aa1.39□□□□□ -2.19
C2CD3-214ENST00000540057 ORMDL1Q9P0S3 153 aa1.39□□□□□ -2.19
C2CD3-214ENST00000540057 H3BQ85 93 aa1.38□□□□□ -2.19
C2CD3-214ENST00000540057 TMEM256-PLSCR3K7ERE1 68 aa1.38□□□□□ -2.19
C2CD3-214ENST00000540057 APOC3P02656 99 aa1.38□□□□□ -2.19
C2CD3-214ENST00000540057 SNAPINO95295 136 aa1.37□□□□□ -2.19
C2CD3-214ENST00000540057 KRTDAPP60985 99 aa1.37□□□□□ -2.19
C2CD3-214ENST00000540057 R4GN34 69 aa1.37□□□□□ -2.19
C2CD3-214ENST00000540057 HCG22E2RYF7 251 aa1.36□□□□□ -2.19
C2CD3-214ENST00000540057 DNAL4O96015 105 aa1.36□□□□□ -2.19
C2CD3-214ENST00000540057 SVBPQ8N300 66 aa1.36□□□□□ -2.19
C2CD3-214ENST00000540057 HIST1H4GQ99525 98 aa1.36□□□□□ -2.19
C2CD3-214ENST00000540057 A0A0B4J2C4 111 aa1.35□□□□□ -2.19
C2CD3-214ENST00000540057 C9JAW5 83 aa1.35□□□□□ -2.19
C2CD3-214ENST00000540057 M0QZ58 72 aa1.35□□□□□ -2.19
C2CD3-214ENST00000540057 LINC01554Q52M75 96 aa1.35□□□□□ -2.19
C2CD3-214ENST00000540057 NDUFA5Q16718 116 aa1.34□□□□□ -2.19
C2CD3-214ENST00000540057 NDUFC1O43677 76 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BKO60814 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BJP06899 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 P0C880 135 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BOP23527 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BBP33778 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BDP58876 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BCP62807 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST2H2BEQ16778 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BHQ93079 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BNQ99877 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 HIST1H2BMQ99879 126 aa1.33□□□□□ -2.2
C2CD3-214ENST00000540057 A0A1B0GW54 56 aa1.32□□□□□ -2.2
C2CD3-214ENST00000540057 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
C2CD3-214ENST00000540057 NREPQ16612 68 aa1.32□□□□□ -2.2
C2CD3-214ENST00000540057 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
C2CD3-214ENST00000540057 CASC2Q6XLA1 102 aa1.32□□□□□ -2.2
C2CD3-214ENST00000540057 MT1LQ93083 61 aa1.32□□□□□ -2.2
C2CD3-214ENST00000540057 PRO1854Q9UHT4 67 aa1.32□□□□□ -2.2
C2CD3-214ENST00000540057 COA6Q5JTJ3 125 aaKnown RBP1.31□□□□□ -2.2
C2CD3-214ENST00000540057 SYNE1Q8NF91 8797 aaKnown RBP1.3□□□□□ -2.2
C2CD3-214ENST00000540057 LOC110117498A0A087WWA1 95 aa1.29□□□□□ -2.2
C2CD3-214ENST00000540057 HSBP1L1C9JCN9 74 aa1.29□□□□□ -2.2
C2CD3-214ENST00000540057 PSMB2P49721 201 aa1.29□□□□□ -2.2
C2CD3-214ENST00000540057 K7EP34 96 aa1.28□□□□□ -2.2
C2CD3-214ENST00000540057 BAALC-AS2P0C853 105 aa1.28□□□□□ -2.2
C2CD3-214ENST00000540057 COX8AP10176 69 aa1.28□□□□□ -2.2
C2CD3-214ENST00000540057 HIST3H2BBQ8N257 126 aa1.28□□□□□ -2.2
C2CD3-214ENST00000540057 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
C2CD3-214ENST00000540057 JMJD7-PLA2G4BH0Y9G9 81 aa1.27□□□□□ -2.21
C2CD3-214ENST00000540057 BPY2O14599 106 aa1.27□□□□□ -2.21
C2CD3-214ENST00000540057 DLEU1O43261 78 aa1.27□□□□□ -2.21
C2CD3-214ENST00000540057 COX6CP09669 75 aa1.27□□□□□ -2.21
C2CD3-214ENST00000540057 FXYD2P54710 66 aa1.27□□□□□ -2.21
C2CD3-214ENST00000540057 BATFQ16520 125 aa1.27□□□□□ -2.21
C2CD3-214ENST00000540057 CYP4F30PQ9H0H9 118 aa1.27□□□□□ -2.21
C2CD3-214ENST00000540057 A0A1W2PPM0 123 aa1.26□□□□□ -2.21
C2CD3-214ENST00000540057 HIST1H2BLQ99880 126 aa1.26□□□□□ -2.21
C2CD3-214ENST00000540057 C14orf132Q9NPU4 83 aa1.26□□□□□ -2.21
C2CD3-214ENST00000540057 HIGD1BQ9P298 99 aa1.26□□□□□ -2.21
C2CD3-214ENST00000540057 A0A0D9SG42 100 aa1.25□□□□□ -2.21
C2CD3-214ENST00000540057 K7ERJ3 54 aa1.25□□□□□ -2.21
C2CD3-214ENST00000540057 MT-ATP8P03928 68 aa1.25□□□□□ -2.21
C2CD3-214ENST00000540057 NAA38Q9BRA0 125 aaKnown RBP1.25□□□□□ -2.21
C2CD3-214ENST00000540057 C14orf144Q96I85 54 aa1.24□□□□□ -2.21
C2CD3-214ENST00000540057 ACYP1P07311 99 aa1.23□□□□□ -2.21
C2CD3-214ENST00000540057 SCGB1C2P0DMR2 95 aa1.22□□□□□ -2.21
C2CD3-214ENST00000540057 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
C2CD3-214ENST00000540057 LOC105371267A0A1B0GV96 52 aa1.21□□□□□ -2.22
C2CD3-214ENST00000540057 S100A1P23297 94 aa1.21□□□□□ -2.22
C2CD3-214ENST00000540057 CAMK2N1Q7Z7J9 78 aa1.21□□□□□ -2.22
C2CD3-214ENST00000540057 TRAV22A0A0B4J277 110 aa1.2□□□□□ -2.22
C2CD3-214ENST00000540057 LOC101927531A0A1B0GV80 90 aa1.2□□□□□ -2.22
C2CD3-214ENST00000540057 ATXN8Q156A1 80 aa1.2□□□□□ -2.22
C2CD3-214ENST00000540057 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
C2CD3-214ENST00000540057 SPATA45Q537H7 98 aa1.18□□□□□ -2.22
C2CD3-214ENST00000540057 VAMP8Q9BV40 100 aa1.18□□□□□ -2.22
C2CD3-214ENST00000540057 S100A6P06703 90 aa1.17□□□□□ -2.22
C2CD3-214ENST00000540057 S100A2P29034 98 aa1.17□□□□□ -2.22
C2CD3-214ENST00000540057 KRTAP12-3P60328 96 aa1.17□□□□□ -2.22
C2CD3-214ENST00000540057 HSD52Q0P140 79 aa1.17□□□□□ -2.22
C2CD3-214ENST00000540057 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
C2CD3-214ENST00000540057 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms