RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CMC2Q9NRP2 79 aa0.88□□□□□ -2.27
TRAV11-201ENST00000539512 A8MTW9 85 aa0.87□□□□□ -2.27
TRAV11-201ENST00000539512 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
TRAV11-201ENST00000539512 PMCHL2Q9BQD1 86 aa0.87□□□□□ -2.27
TRAV11-201ENST00000539512 CDC42SE2Q9NRR3 84 aa0.87□□□□□ -2.27
TRAV11-201ENST00000539512 PRO1854Q9UHT4 67 aa0.87□□□□□ -2.27
TRAV11-201ENST00000539512 UBE2D2P62837 147 aa0.86□□□□□ -2.27
TRAV11-201ENST00000539512 BAGE2Q86Y30 109 aa0.86□□□□□ -2.27
TRAV11-201ENST00000539512 AMELXQ99217 191 aa0.86□□□□□ -2.27
TRAV11-201ENST00000539512 UQCR11O14957 56 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 SFT2D2O95562 160 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 APOC3P02656 99 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 COX6CP09669 75 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 SMIM4Q8WVI0 70 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 ARHGAP5-AS1Q96IT6 56 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 VAMP8Q9BV40 100 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 LINC01558Q9Y6Z2 57 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 ARL2-SNX15V9GYD0 113 aa0.85□□□□□ -2.27
TRAV11-201ENST00000539512 SYNE1Q8NF91 8797 aaKnown RBP0.85□□□□□ -2.27
TRAV11-201ENST00000539512 A0A087WWC5 75 aa0.84□□□□□ -2.27
TRAV11-201ENST00000539512 NMBP08949 121 aa0.84□□□□□ -2.27
TRAV11-201ENST00000539512 IGLC1P0CG04 106 aa0.84□□□□□ -2.27
TRAV11-201ENST00000539512 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
TRAV11-201ENST00000539512 NXT2Q9NPJ8 142 aaKnown RBP0.84□□□□□ -2.27
TRAV11-201ENST00000539512 SMIM11AP58511 58 aa0.83□□□□□ -2.28
TRAV11-201ENST00000539512 COX17Q14061 63 aa0.83□□□□□ -2.28
TRAV11-201ENST00000539512 A0A0G2JND7 137 aa0.82□□□□□ -2.28
TRAV11-201ENST00000539512 M0R3E3 92 aa0.82□□□□□ -2.28
TRAV11-201ENST00000539512 ATOX1O00244 68 aa0.82□□□□□ -2.28
TRAV11-201ENST00000539512 FXYD6-FXYD2A0A087WZ82 144 aa0.81□□□□□ -2.28
TRAV11-201ENST00000539512 MT1BP07438 61 aa0.81□□□□□ -2.28
TRAV11-201ENST00000539512 Q9H521 79 aa0.81□□□□□ -2.28
TRAV11-201ENST00000539512 SNRPGP15A8MWD9 76 aa0.8□□□□□ -2.28
TRAV11-201ENST00000539512 NDUFC1O43677 76 aa0.8□□□□□ -2.28
TRAV11-201ENST00000539512 MGPP08493 103 aa0.8□□□□□ -2.28
TRAV11-201ENST00000539512 FAUP35544 74 aaKnown RBP0.8□□□□□ -2.28
TRAV11-201ENST00000539512 LINC00472Q9H8W2 130 aa0.8□□□□□ -2.28
TRAV11-201ENST00000539512 CACFD1Q9UGQ2 172 aa0.8□□□□□ -2.28
TRAV11-201ENST00000539512 SSBP3-AS1Q7Z2R9 100 aa0.79□□□□□ -2.28
TRAV11-201ENST00000539512 SERP2Q8N6R1 65 aa0.79□□□□□ -2.28
TRAV11-201ENST00000539512 ZNF815PA8K554 130 aa0.78□□□□□ -2.28
TRAV11-201ENST00000539512 BCE1O60756 84 aa0.78□□□□□ -2.28
TRAV11-201ENST00000539512 SPINK1P00995 79 aa0.78□□□□□ -2.28
TRAV11-201ENST00000539512 GNG2P59768 71 aa0.78□□□□□ -2.28
TRAV11-201ENST00000539512 PRLHP81277 87 aa0.78□□□□□ -2.28
TRAV11-201ENST00000539512 Q6JHZ5 121 aa0.78□□□□□ -2.28
TRAV11-201ENST00000539512 TRGV9Q99603 122 aa0.78□□□□□ -2.28
TRAV11-201ENST00000539512 CEBPZOSA8MTT3 80 aa0.77□□□□□ -2.29
TRAV11-201ENST00000539512 H7BZZ5 65 aa0.77□□□□□ -2.29
TRAV11-201ENST00000539512 TRBV25-1A0A075B6N4 114 aa0.76□□□□□ -2.29
TRAV11-201ENST00000539512 TRBV7-7A0A0K0K1E9 115 aa0.76□□□□□ -2.29
TRAV11-201ENST00000539512 SYS1-DBNDD2H3BUS1 97 aa0.76□□□□□ -2.29
TRAV11-201ENST00000539512 PMCHL1Q16048 86 aa0.76□□□□□ -2.29
TRAV11-201ENST00000539512 KRTAP20-2Q3LI61 65 aa0.75□□□□□ -2.29
TRAV11-201ENST00000539512 SPRR4Q96PI1 79 aa0.75□□□□□ -2.29
TRAV11-201ENST00000539512 A0A087WVE0 104 aa0.74□□□□□ -2.29
TRAV11-201ENST00000539512 C7orf77A4D0Y5 90 aa0.74□□□□□ -2.29
TRAV11-201ENST00000539512 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
TRAV11-201ENST00000539512 NMSQ5H8A3 153 aa0.73□□□□□ -2.29
TRAV11-201ENST00000539512 C10orf113Q5VZT2 155 aa0.73□□□□□ -2.29
TRAV11-201ENST00000539512 TRAV21A0A0B4J279 112 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 H3BVH4 76 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 CFDP00746 253 aaPredicted RBP0.72□□□□□ -2.29
TRAV11-201ENST00000539512 IGLC2P0DOY2 106 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 IAPPP10997 89 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 C9orf62Q8N4C0 152 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 C20orf78Q9BR46 151 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 FXYD6Q9H0Q3 95 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 PRO1933Q9H354 126 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 C6orf48Q9UBA6 75 aa0.72□□□□□ -2.29
TRAV11-201ENST00000539512 LINC00959A0A1B0GUT2 108 aa0.71□□□□□ -2.3
TRAV11-201ENST00000539512 NDUFA1O15239 70 aa0.71□□□□□ -2.3
TRAV11-201ENST00000539512 RPS29P62273 56 aaKnown RBP0.71□□□□□ -2.3
TRAV11-201ENST00000539512 KRTAP19-8Q3LI54 63 aa0.71□□□□□ -2.3
TRAV11-201ENST00000539512 NMES1Q9C002 83 aa0.71□□□□□ -2.3
TRAV11-201ENST00000539512 HIGD1BQ9P298 99 aa0.7□□□□□ -2.3
TRAV11-201ENST00000539512 ARMS2P0C7Q2 107 aa0.69□□□□□ -2.3
TRAV11-201ENST00000539512 ETDBQ3ZM63 59 aa0.69□□□□□ -2.3
TRAV11-201ENST00000539512 DEFB107AQ8IZN7 70 aa0.69□□□□□ -2.3
TRAV11-201ENST00000539512 SPCS1Q9Y6A9 102 aa0.69□□□□□ -2.3
TRAV11-201ENST00000539512 F8WEM9 126 aa0.68□□□□□ -2.3
TRAV11-201ENST00000539512 H0YAA0 97 aa0.68□□□□□ -2.3
TRAV11-201ENST00000539512 K7EP34 96 aa0.68□□□□□ -2.3
TRAV11-201ENST00000539512 MT1XP80297 61 aa0.68□□□□□ -2.3
TRAV11-201ENST00000539512 CNFNQ9BYD5 112 aa0.68□□□□□ -2.3
TRAV11-201ENST00000539512 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
TRAV11-201ENST00000539512 PYY3Q5JQD4 70 aa0.67□□□□□ -2.3
TRAV11-201ENST00000539512 TP53AIP1Q9HCN2 124 aa0.67□□□□□ -2.3
TRAV11-201ENST00000539512 PSENENQ9NZ42 101 aa0.67□□□□□ -2.3
TRAV11-201ENST00000539512 LEPROTL1O95214 131 aa0.66□□□□□ -2.3
TRAV11-201ENST00000539512 S100A16Q96FQ6 103 aaKnown RBP0.66□□□□□ -2.3
TRAV11-201ENST00000539512 SPRR2GQ9BYE4 73 aa0.66□□□□□ -2.3
TRAV11-201ENST00000539512 H0Y9P7 68 aa0.65□□□□□ -2.31
TRAV11-201ENST00000539512 M0QY20 66 aa0.65□□□□□ -2.31
TRAV11-201ENST00000539512 GNGT1P63211 74 aa0.65□□□□□ -2.31
TRAV11-201ENST00000539512 PEA15Q15121 130 aa0.65□□□□□ -2.31
TRAV11-201ENST00000539512 TOMM7Q9P0U1 55 aa0.65□□□□□ -2.31
TRAV11-201ENST00000539512 D6R8Y8 96 aa0.64□□□□□ -2.31
TRAV11-201ENST00000539512 MUSTN1Q8IVN3 82 aa0.64□□□□□ -2.31
TRAV11-201ENST00000539512 TRBV7-4A0A0J9YYF1 115 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms