RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LORP23490 312 aaPredicted RBP2.8□□□□□ -1.96
SORT1-209ENST00000538502 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
SORT1-209ENST00000538502 TRRAPQ9Y4A5 3859 aa2.79□□□□□ -1.96
SORT1-209ENST00000538502 FBN3Q75N90 2809 aa2.77□□□□□ -1.97
SORT1-209ENST00000538502 CSMD3Q7Z407 3707 aa2.76□□□□□ -1.97
SORT1-209ENST00000538502 DNAH2Q9P225 4427 aa2.76□□□□□ -1.97
SORT1-209ENST00000538502 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
SORT1-209ENST00000538502 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
SORT1-209ENST00000538502 COL7A1Q02388 2944 aa2.71□□□□□ -1.97
SORT1-209ENST00000538502 PLECQ15149 4684 aaKnown RBP2.7□□□□□ -1.98
SORT1-209ENST00000538502 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
SORT1-209ENST00000538502 KRTAP4-5Q9BYR2 181 aa2.67□□□□□ -1.98
SORT1-209ENST00000538502 DNAH17Q9UFH2 4485 aa2.67□□□□□ -1.98
SORT1-209ENST00000538502 VPS13DQ5THJ4 4388 aa2.63□□□□□ -1.99
SORT1-209ENST00000538502 LRP1BQ9NZR2 4599 aa2.62□□□□□ -1.99
SORT1-209ENST00000538502 CMYA5Q8N3K9 4069 aa2.62□□□□□ -1.99
SORT1-209ENST00000538502 DNAH10Q8IVF4 4471 aa2.61□□□□□ -1.99
SORT1-209ENST00000538502 ANK2Q01484 3957 aa2.61□□□□□ -1.99
SORT1-209ENST00000538502 DNAH8Q96JB1 4490 aa2.61□□□□□ -1.99
SORT1-209ENST00000538502 DNAH11Q96DT5 4516 aa2.61□□□□□ -1.99
SORT1-209ENST00000538502 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
SORT1-209ENST00000538502 MT1HP80294 61 aa2.59□□□□□ -1.99
SORT1-209ENST00000538502 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -2
SORT1-209ENST00000538502 DNAH1Q9P2D7 4330 aa2.59□□□□□ -2
SORT1-209ENST00000538502 DNAH9Q9NYC9 4486 aa2.58□□□□□ -2
SORT1-209ENST00000538502 MT2AP02795 61 aa2.58□□□□□ -2
SORT1-209ENST00000538502 DNAH3Q8TD57 4116 aa2.57□□□□□ -2
SORT1-209ENST00000538502 DNAH5Q8TE73 4624 aa2.57□□□□□ -2
SORT1-209ENST00000538502 KRTAP4-1Q9BYQ7 146 aa2.56□□□□□ -2
SORT1-209ENST00000538502 DYNC1H1Q14204 4646 aaKnown RBP2.55□□□□□ -2
SORT1-209ENST00000538502 SACSQ9NZJ4 4579 aa2.54□□□□□ -2
SORT1-209ENST00000538502 STARD9Q9P2P6 4700 aa2.53□□□□□ -2
SORT1-209ENST00000538502 RYR1P21817 5038 aa2.53□□□□□ -2
SORT1-209ENST00000538502 DYNC2H1Q8NCM8 4307 aaKnown RBP2.53□□□□□ -2
SORT1-209ENST00000538502 KIAA1109Q2LD37 5005 aa2.52□□□□□ -2.01
SORT1-209ENST00000538502 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
SORT1-209ENST00000538502 RYR2Q92736 4967 aa2.5□□□□□ -2.01
SORT1-209ENST00000538502 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
SORT1-209ENST00000538502 MT1FP04733 61 aa2.49□□□□□ -2.01
SORT1-209ENST00000538502 DNHD1Q96M86 4753 aa2.49□□□□□ -2.01
SORT1-209ENST00000538502 DNAH6Q9C0G6 4158 aa2.48□□□□□ -2.01
SORT1-209ENST00000538502 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
SORT1-209ENST00000538502 KMT2AQ03164 3969 aa2.45□□□□□ -2.02
SORT1-209ENST00000538502 DNAH7Q8WXX0 4024 aa2.45□□□□□ -2.02
SORT1-209ENST00000538502 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
SORT1-209ENST00000538502 MT3P25713 68 aa2.42□□□□□ -2.02
SORT1-209ENST00000538502 FAT1Q14517 4588 aa2.42□□□□□ -2.02
SORT1-209ENST00000538502 RYR3Q15413 4870 aa2.42□□□□□ -2.02
SORT1-209ENST00000538502 LYSTQ99698 3801 aa2.39□□□□□ -2.03
SORT1-209ENST00000538502 KRTAP19-1Q8IUB9 90 aa2.39□□□□□ -2.03
SORT1-209ENST00000538502 MT1XP80297 61 aa2.39□□□□□ -2.03
SORT1-209ENST00000538502 APOBP04114 4563 aaKnown RBP2.38□□□□□ -2.03
SORT1-209ENST00000538502 FAT2Q9NYQ8 4349 aa2.38□□□□□ -2.03
SORT1-209ENST00000538502 FAT3Q8TDW7 4589 aa2.37□□□□□ -2.03
SORT1-209ENST00000538502 LCE3BQ5TA77 95 aa2.36□□□□□ -2.03
SORT1-209ENST00000538502 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
SORT1-209ENST00000538502 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
SORT1-209ENST00000538502 HECTD4Q9Y4D8 3996 aa2.35□□□□□ -2.03
SORT1-209ENST00000538502 HERC1Q15751 4861 aa2.35□□□□□ -2.03
SORT1-209ENST00000538502 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
SORT1-209ENST00000538502 HSPG2P98160 4391 aa2.34□□□□□ -2.03
SORT1-209ENST00000538502 FRAS1Q86XX4 4008 aa2.34□□□□□ -2.04
SORT1-209ENST00000538502 MT1GP13640 62 aa2.33□□□□□ -2.04
SORT1-209ENST00000538502 HYDINQ4G0P3 5121 aa2.33□□□□□ -2.04
SORT1-209ENST00000538502 LRP1Q07954 4544 aaKnown RBP2.33□□□□□ -2.04
SORT1-209ENST00000538502 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
SORT1-209ENST00000538502 SPRR2EP22531 72 aa2.32□□□□□ -2.04
SORT1-209ENST00000538502 SPRR2BP35325 72 aa2.32□□□□□ -2.04
SORT1-209ENST00000538502 SPRR2AP35326 72 aa2.32□□□□□ -2.04
SORT1-209ENST00000538502 MT1BP07438 61 aa2.31□□□□□ -2.04
SORT1-209ENST00000538502 MT1LQ93083 61 aa2.28□□□□□ -2.05
SORT1-209ENST00000538502 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
SORT1-209ENST00000538502 LCE2BO14633 110 aa2.26□□□□□ -2.05
SORT1-209ENST00000538502 PKHD1P08F94 4074 aa2.25□□□□□ -2.05
SORT1-209ENST00000538502 PCLOQ9Y6V0 5065 aa2.25□□□□□ -2.05
SORT1-209ENST00000538502 SPRR2DP22532 72 aa2.24□□□□□ -2.05
SORT1-209ENST00000538502 KMT2CQ8NEZ4 4911 aaKnown RBP2.24□□□□□ -2.05
SORT1-209ENST00000538502 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
SORT1-209ENST00000538502 KRTAP9-8Q9BYQ0 159 aa2.24□□□□□ -2.05
SORT1-209ENST00000538502 MUC17Q685J3 4493 aa2.23□□□□□ -2.05
SORT1-209ENST00000538502 PKD1P98161 4303 aa2.23□□□□□ -2.05
SORT1-209ENST00000538502 MT1EP04732 61 aa2.22□□□□□ -2.05
SORT1-209ENST00000538502 HERC2O95714 4834 aa2.21□□□□□ -2.06
SORT1-209ENST00000538502 LRP2P98164 4655 aa2.21□□□□□ -2.06
SORT1-209ENST00000538502 PKHD1L1Q86WI1 4243 aa2.21□□□□□ -2.06
SORT1-209ENST00000538502 KRTAP9-3Q9BYQ3 159 aa2.21□□□□□ -2.06
SORT1-209ENST00000538502 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
SORT1-209ENST00000538502 BIRC6Q9NR09 4857 aa2.19□□□□□ -2.06
SORT1-209ENST00000538502 PRM1P04553 51 aa2.17□□□□□ -2.06
SORT1-209ENST00000538502 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
SORT1-209ENST00000538502 KRTAP4-8A0A0G2JLE6 195 aa2.15□□□□□ -2.06
SORT1-209ENST00000538502 KRTAP17-1Q9BYP8 105 aa2.15□□□□□ -2.06
SORT1-209ENST00000538502 KRTAP4-8Q9BYQ9 185 aa2.15□□□□□ -2.06
SORT1-209ENST00000538502 RNF213Q63HN8 5207 aa2.14□□□□□ -2.07
SORT1-209ENST00000538502 LCE2CQ5TA81 110 aa2.14□□□□□ -2.07
SORT1-209ENST00000538502 EPPK1P58107 5090 aaKnown RBP2.12□□□□□ -2.07
SORT1-209ENST00000538502 UBR4Q5T4S7 5183 aa2.11□□□□□ -2.07
SORT1-209ENST00000538502 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
SORT1-209ENST00000538502 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
SORT1-209ENST00000538502 KRTAP2-1Q9BYU5 128 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms