RNA–Protein interactions for RNA: ENST00000538260.5

ARMC8-223, Transcript of armadillo repeat containing 8, human

TSL 2 BASIC

Gene ARMC8, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARMC8-223	ENST00000538260	KRTAP10-6	P60371	365 aa	Predicted RBP	5.13	□□□□□ -1.59
ARMC8-223	ENST00000538260	STARD9	Q9P2P6	4700 aa		5.08	□□□□□ -1.6
ARMC8-223	ENST00000538260	KMT2A	Q03164	3969 aa		5.07	□□□□□ -1.6
ARMC8-223	ENST00000538260	DNAH17	Q9UFH2	4485 aa		5.06	□□□□□ -1.6
ARMC8-223	ENST00000538260	HECTD4	Q9Y4D8	3996 aa		5.04	□□□□□ -1.6
ARMC8-223	ENST00000538260	ALMS1	Q8TCU4	4167 aa		5.04	□□□□□ -1.6
ARMC8-223	ENST00000538260	VPS13D	Q5THJ4	4388 aa		5.02	□□□□□ -1.61
ARMC8-223	ENST00000538260	KRTAP15-1	Q3LI76	137 aa		5.02	□□□□□ -1.61
ARMC8-223	ENST00000538260	DNAH11	Q96DT5	4516 aa		5	□□□□□ -1.61
ARMC8-223	ENST00000538260	DNAH2	Q9P225	4427 aa		4.98	□□□□□ -1.61
ARMC8-223	ENST00000538260	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.98	□□□□□ -1.61
ARMC8-223	ENST00000538260	DNAH6	Q9C0G6	4158 aa		4.97	□□□□□ -1.61
ARMC8-223	ENST00000538260	PRKDC	P78527	4128 aa	Known RBP	4.96	□□□□□ -1.62
ARMC8-223	ENST00000538260	LRP1B	Q9NZR2	4599 aa		4.95	□□□□□ -1.62
ARMC8-223	ENST00000538260	KRTAP3-2	Q9BYR7	98 aa		4.93	□□□□□ -1.62
ARMC8-223	ENST00000538260	KRTAP3-3	Q9BYR6	98 aa		4.89	□□□□□ -1.63
ARMC8-223	ENST00000538260	DNAH5	Q8TE73	4624 aa		4.87	□□□□□ -1.63
ARMC8-223	ENST00000538260	INE1	O15225	51 aa		4.87	□□□□□ -1.63
ARMC8-223	ENST00000538260	MT1HL1	P0DM35	61 aa		4.86	□□□□□ -1.63
ARMC8-223	ENST00000538260	VPS13B	Q7Z7G8	4022 aa		4.85	□□□□□ -1.63
ARMC8-223	ENST00000538260	KRTAP10-12	P60413	245 aa		4.77	□□□□□ -1.65
ARMC8-223	ENST00000538260	HYDIN	Q4G0P3	5121 aa		4.75	□□□□□ -1.65
ARMC8-223	ENST00000538260	DNHD1	Q96M86	4753 aa		4.74	□□□□□ -1.65
ARMC8-223	ENST00000538260	FAT2	Q9NYQ8	4349 aa		4.71	□□□□□ -1.65
ARMC8-223	ENST00000538260	KRTAP23-1	A1A580	65 aa		4.71	□□□□□ -1.65
ARMC8-223	ENST00000538260	FAT1	Q14517	4588 aa		4.71	□□□□□ -1.65
ARMC8-223	ENST00000538260	KRTAP10-4	P60372	401 aa	Predicted RBP	4.71	□□□□□ -1.66
ARMC8-223	ENST00000538260	PKD1	P98161	4303 aa		4.7	□□□□□ -1.66
ARMC8-223	ENST00000538260	KRTAP12-3	P60328	96 aa		4.69	□□□□□ -1.66
ARMC8-223	ENST00000538260	PKHD1	P08F94	4074 aa		4.68	□□□□□ -1.66
ARMC8-223	ENST00000538260	SACS	Q9NZJ4	4579 aa		4.62	□□□□□ -1.67
ARMC8-223	ENST00000538260	DYNC1H1	Q14204	4646 aa	Known RBP	4.62	□□□□□ -1.67
ARMC8-223	ENST00000538260	CRCT1	Q9UGL9	99 aa		4.6	□□□□□ -1.67
ARMC8-223	ENST00000538260	LCE3A	Q5TA76	89 aa		4.58	□□□□□ -1.68
ARMC8-223	ENST00000538260	MYCBP2	O75592	4640 aa		4.57	□□□□□ -1.68
ARMC8-223	ENST00000538260	LOR	P23490	312 aa	Predicted RBP	4.56	□□□□□ -1.68
ARMC8-223	ENST00000538260	KRTAP4-5	Q9BYR2	181 aa		4.56	□□□□□ -1.68
ARMC8-223	ENST00000538260	LRP1	Q07954	4544 aa	Known RBP	4.53	□□□□□ -1.68
ARMC8-223	ENST00000538260	APOB	P04114	4563 aa	Known RBP	4.48	□□□□□ -1.69
ARMC8-223	ENST00000538260	HSPG2	P98160	4391 aa		4.47	□□□□□ -1.69
ARMC8-223	ENST00000538260	PKHD1L1	Q86WI1	4243 aa		4.45	□□□□□ -1.7
ARMC8-223	ENST00000538260	FAT3	Q8TDW7	4589 aa		4.44	□□□□□ -1.7
ARMC8-223	ENST00000538260	KRTAP10-5	P60370	271 aa		4.37	□□□□□ -1.71
ARMC8-223	ENST00000538260	LRP2	P98164	4655 aa		4.33	□□□□□ -1.72
ARMC8-223	ENST00000538260	KRTAP8-1	Q8IUC2	63 aa		4.33	□□□□□ -1.72
ARMC8-223	ENST00000538260	TNXB	P22105	4242 aa		4.32	□□□□□ -1.72
ARMC8-223	ENST00000538260	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.32	□□□□□ -1.72
ARMC8-223	ENST00000538260	LPA	P08519	4548 aa		4.31	□□□□□ -1.72
ARMC8-223	ENST00000538260	KRTAP17-1	Q9BYP8	105 aa		4.31	□□□□□ -1.72
ARMC8-223	ENST00000538260	RYR2	Q92736	4967 aa		4.29	□□□□□ -1.72
ARMC8-223	ENST00000538260	KIAA1109	Q2LD37	5005 aa		4.27	□□□□□ -1.73
ARMC8-223	ENST00000538260	KRTAP4-1	Q9BYQ7	146 aa		4.27	□□□□□ -1.73
ARMC8-223	ENST00000538260	SPRR2G	Q9BYE4	73 aa		4.24	□□□□□ -1.73
ARMC8-223	ENST00000538260	RYR1	P21817	5038 aa		4.23	□□□□□ -1.73
ARMC8-223	ENST00000538260	RYR3	Q15413	4870 aa		4.2	□□□□□ -1.74
ARMC8-223	ENST00000538260	MT2A	P02795	61 aa		4.2	□□□□□ -1.74
ARMC8-223	ENST00000538260	MT1H	P80294	61 aa		4.18	□□□□□ -1.74
ARMC8-223	ENST00000538260	ABCA13	Q86UQ4	5058 aa		4.1	□□□□□ -1.75
ARMC8-223	ENST00000538260	MT1F	P04733	61 aa		4.1	□□□□□ -1.75
ARMC8-223	ENST00000538260	KRTAP19-4	Q3LI73	84 aa		4.08	□□□□□ -1.76
ARMC8-223	ENST00000538260	KRTAP19-5	Q3LI72	72 aa		4.08	□□□□□ -1.76
ARMC8-223	ENST00000538260	LCE3C	Q5T5A8	94 aa		4.07	□□□□□ -1.76
ARMC8-223	ENST00000538260	KRTAP10-7	P60409	375 aa	Predicted RBP	4.02	□□□□□ -1.77
ARMC8-223	ENST00000538260	SPRR2F	Q96RM1	72 aa		3.99	□□□□□ -1.77
ARMC8-223	ENST00000538260	EPPK1	P58107	5090 aa	Known RBP	3.98	□□□□□ -1.77
ARMC8-223	ENST00000538260	MUC2	Q02817	5179 aa		3.97	□□□□□ -1.77
ARMC8-223	ENST00000538260	MUC17	Q685J3	4493 aa		3.94	□□□□□ -1.78
ARMC8-223	ENST00000538260	KRTAP19-1	Q8IUB9	90 aa		3.94	□□□□□ -1.78
ARMC8-223	ENST00000538260	KRTAP19-8	Q3LI54	63 aa		3.93	□□□□□ -1.78
ARMC8-223	ENST00000538260	KRTAP19-2	Q3LHN2	52 aa		3.92	□□□□□ -1.78
ARMC8-223	ENST00000538260	HERC2	O95714	4834 aa		3.85	□□□□□ -1.79
ARMC8-223	ENST00000538260	SYNE1	Q8NF91	8797 aa	Known RBP	3.84	□□□□□ -1.79
ARMC8-223	ENST00000538260	MT1X	P80297	61 aa		3.8	□□□□□ -1.8
ARMC8-223	ENST00000538260	SPRR5	A0A1B0GTR4	108 aa		3.8	□□□□□ -1.8
ARMC8-223	ENST00000538260	FLG	P20930	4061 aa	Predicted RBP	3.79	□□□□□ -1.8
ARMC8-223	ENST00000538260	KRTAP12-4	P60329	112 aa		3.79	□□□□□ -1.8
ARMC8-223	ENST00000538260	FAT4	Q6V0I7	4981 aa		3.77	□□□□□ -1.81
ARMC8-223	ENST00000538260	MT1B	P07438	61 aa		3.76	□□□□□ -1.81
ARMC8-223	ENST00000538260	PCLO	Q9Y6V0	5065 aa		3.74	□□□□□ -1.81
ARMC8-223	ENST00000538260	LCE3B	Q5TA77	95 aa		3.74	□□□□□ -1.81
ARMC8-223	ENST00000538260	MT1G	P13640	62 aa		3.7	□□□□□ -1.82
ARMC8-223	ENST00000538260	KRTAP9-8	Q9BYQ0	159 aa		3.7	□□□□□ -1.82
ARMC8-223	ENST00000538260	LCE2C	Q5TA81	110 aa		3.68	□□□□□ -1.82
ARMC8-223	ENST00000538260	HERC1	Q15751	4861 aa		3.67	□□□□□ -1.82
ARMC8-223	ENST00000538260	BIRC6	Q9NR09	4857 aa		3.67	□□□□□ -1.82
ARMC8-223	ENST00000538260	SPRR2E	P22531	72 aa		3.66	□□□□□ -1.82
ARMC8-223	ENST00000538260	SPRR2B	P35325	72 aa		3.66	□□□□□ -1.82
ARMC8-223	ENST00000538260	SPRR2A	P35326	72 aa		3.66	□□□□□ -1.82
ARMC8-223	ENST00000538260	KRTAP4-8	A0A0G2JLE6	195 aa		3.66	□□□□□ -1.82
ARMC8-223	ENST00000538260	KRTAP4-8	Q9BYQ9	185 aa		3.66	□□□□□ -1.82
ARMC8-223	ENST00000538260	RNF213	Q63HN8	5207 aa		3.62	□□□□□ -1.83
ARMC8-223	ENST00000538260	LCE3D	Q9BYE3	92 aa		3.62	□□□□□ -1.83
ARMC8-223	ENST00000538260	KRTAP9-3	Q9BYQ3	159 aa		3.61	□□□□□ -1.83
ARMC8-223	ENST00000538260	HMCN2	Q8NDA2	5059 aa		3.59	□□□□□ -1.84
ARMC8-223	ENST00000538260	LCE3E	Q5T5B0	92 aa		3.58	□□□□□ -1.84
ARMC8-223	ENST00000538260	LCE2B	O14633	110 aa		3.58	□□□□□ -1.84
ARMC8-223	ENST00000538260	LCE2D	Q5TA82	110 aa	Predicted RBP	3.58	□□□□□ -1.84
ARMC8-223	ENST00000538260	SPRR2D	P22532	72 aa		3.54	□□□□□ -1.84
ARMC8-223	ENST00000538260	MT1L	Q93083	61 aa		3.52	□□□□□ -1.85
ARMC8-223	ENST00000538260	UBR4	Q5T4S7	5183 aa		3.51	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms