RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DNAH2Q9P225 4427 aa2.05□□□□□ -2.08
PTPN22-211ENST00000538253 ANAPC11Q9NYG5 84 aa2.04□□□□□ -2.08
PTPN22-211ENST00000538253 K7ERS5 55 aa2.04□□□□□ -2.08
PTPN22-211ENST00000538253 TP53AIP1Q9HCN2 124 aa2.03□□□□□ -2.08
PTPN22-211ENST00000538253 A0A1B0GVX0 72 aa2.03□□□□□ -2.09
PTPN22-211ENST00000538253 A8MUU9 505 aa2.03□□□□□ -2.09
PTPN22-211ENST00000538253 SPATA8Q6RVD6 105 aa2.03□□□□□ -2.09
PTPN22-211ENST00000538253 DNAH8Q96JB1 4490 aa2.03□□□□□ -2.09
PTPN22-211ENST00000538253 DMBT1Q9UGM3 2413 aaPredicted RBP2.02□□□□□ -2.09
PTPN22-211ENST00000538253 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
PTPN22-211ENST00000538253 FAT2Q9NYQ8 4349 aa2.02□□□□□ -2.09
PTPN22-211ENST00000538253 WFDC13Q8IUB5 93 aa2.02□□□□□ -2.09
PTPN22-211ENST00000538253 LRP1BQ9NZR2 4599 aa2.01□□□□□ -2.09
PTPN22-211ENST00000538253 KRTAP13-3Q3SY46 172 aa2□□□□□ -2.09
PTPN22-211ENST00000538253 Q96NJ1 140 aa2□□□□□ -2.09
PTPN22-211ENST00000538253 LINC00472Q9H8W2 130 aa2□□□□□ -2.09
PTPN22-211ENST00000538253 FLG2Q5D862 2391 aaPredicted RBP2□□□□□ -2.09
PTPN22-211ENST00000538253 RPL37P61927 97 aaKnown RBP2□□□□□ -2.09
PTPN22-211ENST00000538253 MRPL34Q9BQ48 92 aaKnown RBP1.99□□□□□ -2.09
PTPN22-211ENST00000538253 H3BPC8 53 aa1.98□□□□□ -2.09
PTPN22-211ENST00000538253 KRTAP15-1Q3LI76 137 aa1.98□□□□□ -2.09
PTPN22-211ENST00000538253 UQCR11O14957 56 aa1.98□□□□□ -2.09
PTPN22-211ENST00000538253 CSMD3Q7Z407 3707 aa1.97□□□□□ -2.09
PTPN22-211ENST00000538253 DEFB116Q30KQ4 102 aa1.97□□□□□ -2.09
PTPN22-211ENST00000538253 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
PTPN22-211ENST00000538253 Q5W150 140 aa1.97□□□□□ -2.09
PTPN22-211ENST00000538253 DMAC1Q96GE9 116 aa1.97□□□□□ -2.09
PTPN22-211ENST00000538253 HRES1P13985 223 aa1.97□□□□□ -2.09
PTPN22-211ENST00000538253 LYSTQ99698 3801 aa1.97□□□□□ -2.09
PTPN22-211ENST00000538253 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
PTPN22-211ENST00000538253 C9orf92A6NGG3 77 aa1.96□□□□□ -2.1
PTPN22-211ENST00000538253 K7EQZ3 153 aa1.96□□□□□ -2.1
PTPN22-211ENST00000538253 DSCR10P59022 87 aa1.96□□□□□ -2.1
PTPN22-211ENST00000538253 COX6B2Q6YFQ2 88 aa1.96□□□□□ -2.1
PTPN22-211ENST00000538253 HECTD4Q9Y4D8 3996 aa1.96□□□□□ -2.1
PTPN22-211ENST00000538253 KRTAP9-7A8MTY7 169 aa1.96□□□□□ -2.1
PTPN22-211ENST00000538253 A0A1B0GU69 56 aa1.95□□□□□ -2.1
PTPN22-211ENST00000538253 VPS13BQ7Z7G8 4022 aa1.95□□□□□ -2.1
PTPN22-211ENST00000538253 PKD1P98161 4303 aa1.95□□□□□ -2.1
PTPN22-211ENST00000538253 KMT2AQ03164 3969 aa1.94□□□□□ -2.1
PTPN22-211ENST00000538253 FRAS1Q86XX4 4008 aa1.94□□□□□ -2.1
PTPN22-211ENST00000538253 PCOTHQ58A44 107 aa1.94□□□□□ -2.1
PTPN22-211ENST00000538253 MMP24-AS1A0A0U1RRL7 71 aa1.93□□□□□ -2.1
PTPN22-211ENST00000538253 CRIPTQ9P021 101 aa1.93□□□□□ -2.1
PTPN22-211ENST00000538253 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
PTPN22-211ENST00000538253 PKHD1P08F94 4074 aa1.93□□□□□ -2.1
PTPN22-211ENST00000538253 HSPG2P98160 4391 aa1.92□□□□□ -2.1
PTPN22-211ENST00000538253 CAMK2N1Q7Z7J9 78 aa1.92□□□□□ -2.1
PTPN22-211ENST00000538253 PKHD1L1Q86WI1 4243 aa1.92□□□□□ -2.1
PTPN22-211ENST00000538253 A0A0G2JQZ4 141 aa1.92□□□□□ -2.1
PTPN22-211ENST00000538253 LCE4AQ5TA78 99 aa1.91□□□□□ -2.1
PTPN22-211ENST00000538253 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
PTPN22-211ENST00000538253 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
PTPN22-211ENST00000538253 MUC2Q02817 5179 aa1.89□□□□□ -2.11
PTPN22-211ENST00000538253 IGKV2D-30A0A075B6S6 120 aa1.89□□□□□ -2.11
PTPN22-211ENST00000538253 IGKV2-30P06310 120 aa1.89□□□□□ -2.11
PTPN22-211ENST00000538253 FAT1Q14517 4588 aa1.88□□□□□ -2.11
PTPN22-211ENST00000538253 HERC1Q15751 4861 aa1.87□□□□□ -2.11
PTPN22-211ENST00000538253 M0R2T5 61 aa1.87□□□□□ -2.11
PTPN22-211ENST00000538253 KRTAP23-1A1A580 65 aa1.87□□□□□ -2.11
PTPN22-211ENST00000538253 H1FX-AS1Q4G0G2 97 aa1.87□□□□□ -2.11
PTPN22-211ENST00000538253 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
PTPN22-211ENST00000538253 KRTAP9-3Q9BYQ3 159 aa1.86□□□□□ -2.11
PTPN22-211ENST00000538253 ACYP2P14621 99 aa1.85□□□□□ -2.11
PTPN22-211ENST00000538253 FAT3Q8TDW7 4589 aa1.85□□□□□ -2.11
PTPN22-211ENST00000538253 MYCBP2O75592 4640 aa1.85□□□□□ -2.11
PTPN22-211ENST00000538253 A0A1B0GU33 70 aa1.84□□□□□ -2.11
PTPN22-211ENST00000538253 S4R3F8 94 aa1.83□□□□□ -2.12
PTPN22-211ENST00000538253 H0YAA0 97 aa1.82□□□□□ -2.12
PTPN22-211ENST00000538253 C10orf95Q9H7T3 257 aa1.79□□□□□ -2.12
PTPN22-211ENST00000538253 R4GN34 69 aa1.78□□□□□ -2.12
PTPN22-211ENST00000538253 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
PTPN22-211ENST00000538253 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.13
PTPN22-211ENST00000538253 MUC17Q685J3 4493 aa1.77□□□□□ -2.13
PTPN22-211ENST00000538253 TNXBP22105 4242 aa1.77□□□□□ -2.13
PTPN22-211ENST00000538253 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
PTPN22-211ENST00000538253 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
PTPN22-211ENST00000538253 LRP1Q07954 4544 aaKnown RBP1.76□□□□□ -2.13
PTPN22-211ENST00000538253 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
PTPN22-211ENST00000538253 KRTAP3-1Q9BYR8 98 aa1.75□□□□□ -2.13
PTPN22-211ENST00000538253 MT1HP80294 61 aa1.74□□□□□ -2.13
PTPN22-211ENST00000538253 KRTAP4-1Q9BYQ7 146 aa1.74□□□□□ -2.13
PTPN22-211ENST00000538253 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
PTPN22-211ENST00000538253 KRTAP10-10P60014 251 aa1.73□□□□□ -2.13
PTPN22-211ENST00000538253 KRTAP10-6P60371 365 aaPredicted RBP1.73□□□□□ -2.13
PTPN22-211ENST00000538253 M0QZ58 72 aa1.72□□□□□ -2.13
PTPN22-211ENST00000538253 RNF213Q63HN8 5207 aa1.72□□□□□ -2.13
PTPN22-211ENST00000538253 PLAC4Q8WY50 150 aa1.71□□□□□ -2.14
PTPN22-211ENST00000538253 KRTAP19-2Q3LHN2 52 aa1.7□□□□□ -2.14
PTPN22-211ENST00000538253 KRTAP20-1Q3LI63 56 aa1.7□□□□□ -2.14
PTPN22-211ENST00000538253 NEBP20929 6669 aa1.69□□□□□ -2.14
PTPN22-211ENST00000538253 MT2AP02795 61 aa1.65□□□□□ -2.14
PTPN22-211ENST00000538253 SSPOA2VEC9 5147 aa1.65□□□□□ -2.14
PTPN22-211ENST00000538253 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
PTPN22-211ENST00000538253 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
PTPN22-211ENST00000538253 LRP2P98164 4655 aa1.65□□□□□ -2.15
PTPN22-211ENST00000538253 INE1O15225 51 aa1.63□□□□□ -2.15
PTPN22-211ENST00000538253 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
PTPN22-211ENST00000538253 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
PTPN22-211ENST00000538253 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms