RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 DNAH6Q9C0G6 4158 aa0.78□□□□□ -2.28
AC055720.2-201ENST00000537724 SPTBN5Q9NRC6 3674 aaKnown RBP0.78□□□□□ -2.28
AC055720.2-201ENST00000537724 HRNRQ86YZ3 2850 aaPredicted RBP0.78□□□□□ -2.28
AC055720.2-201ENST00000537724 APOBP04114 4563 aaKnown RBP0.78□□□□□ -2.28
AC055720.2-201ENST00000537724 MT1AP04731 61 aa0.78□□□□□ -2.28
AC055720.2-201ENST00000537724 TEP1Q99973 2627 aaKnown RBP0.78□□□□□ -2.29
AC055720.2-201ENST00000537724 KALRNO60229 2985 aa0.78□□□□□ -2.29
AC055720.2-201ENST00000537724 AKAP9Q99996 3911 aa0.77□□□□□ -2.29
AC055720.2-201ENST00000537724 RHPN1-AS1Q9BWJ2 59 aa0.77□□□□□ -2.29
AC055720.2-201ENST00000537724 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
AC055720.2-201ENST00000537724 USP9XQ93008 2570 aaPredicted RBP0.77□□□□□ -2.29
AC055720.2-201ENST00000537724 CFAP54Q96N23 3096 aa0.76□□□□□ -2.29
AC055720.2-201ENST00000537724 ZANQ9Y493 2812 aa0.76□□□□□ -2.29
AC055720.2-201ENST00000537724 MYO18BQ8IUG5 2567 aa0.76□□□□□ -2.29
AC055720.2-201ENST00000537724 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
AC055720.2-201ENST00000537724 SPRR2AP35326 72 aa0.75□□□□□ -2.29
AC055720.2-201ENST00000537724 ITPR1Q14643 2758 aa0.74□□□□□ -2.29
AC055720.2-201ENST00000537724 FAT3Q8TDW7 4589 aa0.74□□□□□ -2.29
AC055720.2-201ENST00000537724 IGSF10Q6WRI0 2623 aa0.73□□□□□ -2.29
AC055720.2-201ENST00000537724 DNAH10Q8IVF4 4471 aa0.73□□□□□ -2.29
AC055720.2-201ENST00000537724 CSMD1Q96PZ7 3565 aa0.73□□□□□ -2.29
AC055720.2-201ENST00000537724 TGP01266 2768 aa0.73□□□□□ -2.29
AC055720.2-201ENST00000537724 DMXL2Q8TDJ6 3036 aa0.73□□□□□ -2.29
AC055720.2-201ENST00000537724 DEFB124Q8NES8 71 aa0.72□□□□□ -2.29
AC055720.2-201ENST00000537724 MAST4O15021 2626 aa0.72□□□□□ -2.29
AC055720.2-201ENST00000537724 DNAH1Q9P2D7 4330 aa0.72□□□□□ -2.29
AC055720.2-201ENST00000537724 PKHD1P08F94 4074 aa0.71□□□□□ -2.3
AC055720.2-201ENST00000537724 KRTAP6-2Q3LI66 62 aa0.71□□□□□ -2.3
AC055720.2-201ENST00000537724 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
AC055720.2-201ENST00000537724 AHNAK2Q8IVF2 5795 aa0.71□□□□□ -2.3
AC055720.2-201ENST00000537724 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
AC055720.2-201ENST00000537724 SMR3BP02814 79 aaPredicted RBP0.7□□□□□ -2.3
AC055720.2-201ENST00000537724 NIPBLQ6KC79 2804 aaeCLIP0.7□□□□□ -2.3
AC055720.2-201ENST00000537724 WDR87Q6ZQQ6 2873 aa0.69□□□□□ -2.3
AC055720.2-201ENST00000537724 LAMA3Q16787 3333 aa0.69□□□□□ -2.3
AC055720.2-201ENST00000537724 ATMQ13315 3056 aa0.69□□□□□ -2.3
AC055720.2-201ENST00000537724 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
AC055720.2-201ENST00000537724 LRBAP50851 2863 aa0.68□□□□□ -2.3
AC055720.2-201ENST00000537724 HTTP42858 3142 aa0.68□□□□□ -2.3
AC055720.2-201ENST00000537724 COL6A3P12111 3177 aa0.68□□□□□ -2.3
AC055720.2-201ENST00000537724 SMG1Q96Q15 3661 aaKnown RBP0.68□□□□□ -2.3
AC055720.2-201ENST00000537724 FRYLO94915 3013 aa0.67□□□□□ -2.3
AC055720.2-201ENST00000537724 LRP1BQ9NZR2 4599 aa0.66□□□□□ -2.3
AC055720.2-201ENST00000537724 FLNAP21333 2647 aaKnown RBP0.66□□□□□ -2.3
AC055720.2-201ENST00000537724 A0A096LNI7 61 aa0.66□□□□□ -2.3
AC055720.2-201ENST00000537724 APELAP0DMC3 54 aa0.66□□□□□ -2.3
AC055720.2-201ENST00000537724 DEFB1P60022 68 aa0.66□□□□□ -2.3
AC055720.2-201ENST00000537724 PLECQ15149 4684 aaKnown RBP0.66□□□□□ -2.3
AC055720.2-201ENST00000537724 CMYA5Q8N3K9 4069 aa0.65□□□□□ -2.3
AC055720.2-201ENST00000537724 MGAM2Q2M2H8 2515 aa0.65□□□□□ -2.31
AC055720.2-201ENST00000537724 SPRR2EP22531 72 aa0.65□□□□□ -2.31
AC055720.2-201ENST00000537724 SPRR2FQ96RM1 72 aa0.65□□□□□ -2.31
AC055720.2-201ENST00000537724 TEX15Q9BXT5 2789 aa0.65□□□□□ -2.31
AC055720.2-201ENST00000537724 TRIOO75962 3097 aa0.64□□□□□ -2.31
AC055720.2-201ENST00000537724 SVEP1Q4LDE5 3571 aa0.64□□□□□ -2.31
AC055720.2-201ENST00000537724 MAP1AP78559 2803 aaPredicted RBP0.64□□□□□ -2.31
AC055720.2-201ENST00000537724 LAMA1P25391 3075 aa0.63□□□□□ -2.31
AC055720.2-201ENST00000537724 FAT1Q14517 4588 aa0.63□□□□□ -2.31
AC055720.2-201ENST00000537724 PRUNE2Q8WUY3 3088 aa0.62□□□□□ -2.31
AC055720.2-201ENST00000537724 ADGRG4Q8IZF6 3080 aa0.62□□□□□ -2.31
AC055720.2-201ENST00000537724 SPTAN1Q13813 2472 aaKnown RBP0.61□□□□□ -2.31
AC055720.2-201ENST00000537724 TRRAPQ9Y4A5 3859 aa0.61□□□□□ -2.31
AC055720.2-201ENST00000537724 NBEAL1Q6ZS30 2694 aa0.61□□□□□ -2.31
AC055720.2-201ENST00000537724 DEFB136Q30KP8 78 aa0.61□□□□□ -2.31
AC055720.2-201ENST00000537724 DNAH12Q6ZR08 3092 aa0.61□□□□□ -2.31
AC055720.2-201ENST00000537724 ITPR2Q14571 2701 aa0.6□□□□□ -2.31
AC055720.2-201ENST00000537724 CFAP46Q8IYW2 2715 aa0.59□□□□□ -2.31
AC055720.2-201ENST00000537724 DOPEY1Q5JWR5 2465 aa0.59□□□□□ -2.31
AC055720.2-201ENST00000537724 DNAH17Q9UFH2 4485 aa0.58□□□□□ -2.32
AC055720.2-201ENST00000537724 HTN1P15515 57 aa0.58□□□□□ -2.32
AC055720.2-201ENST00000537724 C5orf42Q9H799 3197 aa0.57□□□□□ -2.32
AC055720.2-201ENST00000537724 STAB2Q8WWQ8 2551 aa0.57□□□□□ -2.32
AC055720.2-201ENST00000537724 DMDP11532 3685 aa0.57□□□□□ -2.32
AC055720.2-201ENST00000537724 RPS29P62273 56 aaKnown RBP0.56□□□□□ -2.32
AC055720.2-201ENST00000537724 FAT4Q6V0I7 4981 aa0.55□□□□□ -2.32
AC055720.2-201ENST00000537724 SZT2Q5T011 3432 aa0.54□□□□□ -2.32
AC055720.2-201ENST00000537724 DNAH5Q8TE73 4624 aa0.54□□□□□ -2.32
AC055720.2-201ENST00000537724 DYNC1H1Q14204 4646 aaKnown RBP0.54□□□□□ -2.32
AC055720.2-201ENST00000537724 HMCN2Q8NDA2 5059 aa0.53□□□□□ -2.32
AC055720.2-201ENST00000537724 DEFB133Q30KQ1 61 aa0.53□□□□□ -2.32
AC055720.2-201ENST00000537724 MUC3AQ02505 3323 aa0.51□□□□□ -2.33
AC055720.2-201ENST00000537724 MUC17Q685J3 4493 aa0.51□□□□□ -2.33
AC055720.2-201ENST00000537724 MKI67P46013 3256 aaKnown RBP0.51□□□□□ -2.33
AC055720.2-201ENST00000537724 CEP295Q9C0D2 2601 aa0.51□□□□□ -2.33
AC055720.2-201ENST00000537724 HERC1Q15751 4861 aa0.5□□□□□ -2.33
AC055720.2-201ENST00000537724 FREM2Q5SZK8 3169 aa0.49□□□□□ -2.33
AC055720.2-201ENST00000537724 VPS13CQ709C8 3753 aa0.49□□□□□ -2.33
AC055720.2-201ENST00000537724 LRP2P98164 4655 aa0.49□□□□□ -2.33
AC055720.2-201ENST00000537724 CSMD2Q7Z408 3487 aa0.49□□□□□ -2.33
AC055720.2-201ENST00000537724 BOD1L1Q8NFC6 3051 aa0.47□□□□□ -2.33
AC055720.2-201ENST00000537724 XIRP2A4UGR9 3374 aa0.46□□□□□ -2.34
AC055720.2-201ENST00000537724 MT1EP04732 61 aa0.46□□□□□ -2.34
AC055720.2-201ENST00000537724 LINC01556Q5JQF7 62 aa0.46□□□□□ -2.34
AC055720.2-201ENST00000537724 DCHS1Q96JQ0 3298 aa0.46□□□□□ -2.34
AC055720.2-201ENST00000537724 MT1HP80294 61 aa0.45□□□□□ -2.34
AC055720.2-201ENST00000537724 TLN1Q9Y490 2541 aaKnown RBP0.45□□□□□ -2.34
AC055720.2-201ENST00000537724 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
AC055720.2-201ENST00000537724 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
AC055720.2-201ENST00000537724 STATHP02808 62 aa0.44□□□□□ -2.34
AC055720.2-201ENST00000537724 Q9Y3F1 56 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms