RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SSPOA2VEC9 5147 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
PRKDC-208ENST00000536710 D6R8Y8 96 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 F8VRH5 84 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 K7EMI3 77 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 BCE1O60756 84 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 PPP1R17O96001 155 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 SPRR1AP35321 89 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 RPS29P62273 56 aaKnown RBP0.6□□□□□ -2.31
PRKDC-208ENST00000536710 ALKAL2Q6UX46 152 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 DPH3Q96FX2 82 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 CDKN2A-AS1Q9UH64 79 aa0.6□□□□□ -2.31
PRKDC-208ENST00000536710 FCER1GP30273 86 aa0.59□□□□□ -2.31
PRKDC-208ENST00000536710 IFI27P40305 119 aaPredicted RBP0.59□□□□□ -2.31
PRKDC-208ENST00000536710 Q8N8P6 123 aa0.59□□□□□ -2.31
PRKDC-208ENST00000536710 SPRR4Q96PI1 79 aa0.59□□□□□ -2.31
PRKDC-208ENST00000536710 MACF1Q9UPN3 7388 aaKnown RBP0.58□□□□□ -2.32
PRKDC-208ENST00000536710 LINC01549A6NIU2 74 aa0.58□□□□□ -2.32
PRKDC-208ENST00000536710 SPINK1P00995 79 aa0.58□□□□□ -2.32
PRKDC-208ENST00000536710 IGLC3P0DOY3 106 aa0.58□□□□□ -2.32
PRKDC-208ENST00000536710 PRLHP81277 87 aa0.58□□□□□ -2.32
PRKDC-208ENST00000536710 COX17Q14061 63 aa0.58□□□□□ -2.32
PRKDC-208ENST00000536710 ADIRFQ15847 76 aa0.58□□□□□ -2.32
PRKDC-208ENST00000536710 MRPL54Q6P161 138 aaKnown RBP0.58□□□□□ -2.32
PRKDC-208ENST00000536710 SPAG11AQ6PDA7 123 aa0.58□□□□□ -2.32
PRKDC-208ENST00000536710 KCNQ1DNQ9H478 68 aa0.58□□□□□ -2.32
PRKDC-208ENST00000536710 NXT2Q9NPJ8 142 aaKnown RBP0.58□□□□□ -2.32
PRKDC-208ENST00000536710 S100A8P05109 93 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 SPINK8P0C7L1 97 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 SPRR1BP22528 89 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 SEC11AP67812 179 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 SFTA2Q6UW10 78 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 Q6ZRX8 168 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 SSBP3-AS1Q7Z2R9 100 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 C18orf32Q8TCD1 76 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 COPS9Q8WXC6 57 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 C2orf88Q9BSF0 95 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 TOMM7Q9P0U1 55 aa0.57□□□□□ -2.32
PRKDC-208ENST00000536710 SYNE2Q8WXH0 6885 aaKnown RBP0.56□□□□□ -2.32
PRKDC-208ENST00000536710 IGLV5-48A0A075B6I7 105 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 TRBV10-3A0A0K0K1G6 114 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 TMEM218A2RU14 115 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 MT2AP02795 61 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 SMIM13P0DJ93 91 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 PEA15Q15121 130 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 PMCHL1Q16048 86 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 KRTAP19-6Q3LI70 58 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 BAGE3Q86Y29 109 aa0.56□□□□□ -2.32
PRKDC-208ENST00000536710 MT1FP04733 61 aa0.55□□□□□ -2.32
PRKDC-208ENST00000536710 SMIM6P0DI80 62 aa0.55□□□□□ -2.32
PRKDC-208ENST00000536710 TMEM170BQ5T4T1 132 aa0.55□□□□□ -2.32
PRKDC-208ENST00000536710 MUC12Q9UKN1 5478 aa0.54□□□□□ -2.32
PRKDC-208ENST00000536710 ETDCA0A1B0GVM5 59 aa0.54□□□□□ -2.32
PRKDC-208ENST00000536710 C9orf92A6NGG3 77 aa0.54□□□□□ -2.32
PRKDC-208ENST00000536710 LINC00158P58513 81 aa0.54□□□□□ -2.32
PRKDC-208ENST00000536710 MEIG1Q5JSS6 88 aa0.54□□□□□ -2.32
PRKDC-208ENST00000536710 LINC00308Q8TCZ7 52 aa0.54□□□□□ -2.32
PRKDC-208ENST00000536710 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
PRKDC-208ENST00000536710 MYMXA0A1B0GTQ4 84 aa0.53□□□□□ -2.32
PRKDC-208ENST00000536710 LINC00587B1AMM8 73 aa0.53□□□□□ -2.32
PRKDC-208ENST00000536710 S100PP25815 95 aa0.53□□□□□ -2.32
PRKDC-208ENST00000536710 PLNP26678 52 aa0.53□□□□□ -2.32
PRKDC-208ENST00000536710 PMCHL2Q9BQD1 86 aa0.53□□□□□ -2.32
PRKDC-208ENST00000536710 SPANXDQ9BXN6 97 aa0.53□□□□□ -2.32
PRKDC-208ENST00000536710 PRO1933Q9H354 126 aa0.53□□□□□ -2.32
PRKDC-208ENST00000536710 SMCO4Q9NRQ5 59 aa0.53□□□□□ -2.32
PRKDC-208ENST00000536710 KMT2DO14686 5537 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 NEBP20929 6669 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 TRBV7-7A0A0K0K1E9 115 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 SYS1-DBNDD2H3BUS1 97 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 M0R2T5 61 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 LEPROTL1O95214 131 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 APOC3P02656 99 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 COX7BP24311 80 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 C9orf153Q5TBE3 101 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 SVBPQ8N300 66 aa0.52□□□□□ -2.33
PRKDC-208ENST00000536710 C20orf202A1L168 122 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 ZNF815PA8K554 130 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 MT1BP07438 61 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 C3orf79P0CE67 100 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 IFITM1P13164 125 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 RBM3P98179 157 aaKnown RBP0.51□□□□□ -2.33
PRKDC-208ENST00000536710 Q6JHZ5 121 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 COX6B2Q6YFQ2 88 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 MUSTN1Q8IVN3 82 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 GPR98Q8WXG9 6306 aa0.51□□□□□ -2.33
PRKDC-208ENST00000536710 TRAV13-2A0A0B4J235 113 aa0.5□□□□□ -2.33
PRKDC-208ENST00000536710 hADV29S1A0JD25 119 aa0.5□□□□□ -2.33
PRKDC-208ENST00000536710 KRTAP19-8Q3LI54 63 aa0.5□□□□□ -2.33
PRKDC-208ENST00000536710 DEFB105AQ8NG35 78 aa0.5□□□□□ -2.33
PRKDC-208ENST00000536710 SPRR2GQ9BYE4 73 aa0.5□□□□□ -2.33
PRKDC-208ENST00000536710 LINC00472Q9H8W2 130 aa0.5□□□□□ -2.33
PRKDC-208ENST00000536710 TRBV7-4A0A0J9YYF1 115 aa0.49□□□□□ -2.33
PRKDC-208ENST00000536710 H3BUT2 72 aa0.49□□□□□ -2.33
PRKDC-208ENST00000536710 DLEU1O43261 78 aa0.49□□□□□ -2.33
PRKDC-208ENST00000536710 BVES-AS1Q5T3Y7 98 aa0.49□□□□□ -2.33
PRKDC-208ENST00000536710 HCG22E2RYF7 251 aa0.48□□□□□ -2.33
PRKDC-208ENST00000536710 F8WEM9 126 aa0.48□□□□□ -2.33
PRKDC-208ENST00000536710 H0YGX0 51 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms