RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 IGKV3D-7A0A0C4DH55 119 aa2.58□□□□□ -2
CLIP1-207ENST00000536634 C11orf86A6NJI1 115 aa2.58□□□□□ -2
CLIP1-207ENST00000536634 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
CLIP1-207ENST00000536634 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
CLIP1-207ENST00000536634 MUSTN1Q8IVN3 82 aa2.58□□□□□ -2
CLIP1-207ENST00000536634 CLEC2BQ92478 149 aa2.58□□□□□ -2
CLIP1-207ENST00000536634 TRBV7-4A0A0J9YYF1 115 aa2.57□□□□□ -2
CLIP1-207ENST00000536634 hDV103S1A0JD37 113 aa2.57□□□□□ -2
CLIP1-207ENST00000536634 DNAL4O96015 105 aa2.57□□□□□ -2
CLIP1-207ENST00000536634 SOSTDC1Q6X4U4 206 aa2.57□□□□□ -2
CLIP1-207ENST00000536634 LINC00846Q9NV44 126 aa2.57□□□□□ -2
CLIP1-207ENST00000536634 H7C2G1 150 aa2.56□□□□□ -2
CLIP1-207ENST00000536634 LEPROTO15243 131 aa2.56□□□□□ -2
CLIP1-207ENST00000536634 MT2AP02795 61 aa2.56□□□□□ -2
CLIP1-207ENST00000536634 TSPEAR-AS2P59090 65 aa2.56□□□□□ -2
CLIP1-207ENST00000536634 ZNF706Q9Y5V0 76 aaPredicted RBP2.56□□□□□ -2
CLIP1-207ENST00000536634 TRAV23DV6A0A075B6W5 121 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 MT1FP04733 61 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 BAALC-AS2P0C853 105 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 MP68P56378 58 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 LINC00313P59037 77 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 LINC01554Q52M75 96 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 COX7B2Q8TF08 81 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 SCGB3A1Q96QR1 104 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 SND1-IT1Q9HBX3 110 aa2.55□□□□□ -2
CLIP1-207ENST00000536634 TRAV22A0A0B4J277 110 aa2.54□□□□□ -2
CLIP1-207ENST00000536634 IGLV6-57P01721 117 aa2.54□□□□□ -2
CLIP1-207ENST00000536634 RPL37P61927 97 aaKnown RBP2.54□□□□□ -2
CLIP1-207ENST00000536634 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
CLIP1-207ENST00000536634 CYP4F30PQ9H0H9 118 aa2.54□□□□□ -2
CLIP1-207ENST00000536634 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
CLIP1-207ENST00000536634 SNURFQ9Y675 71 aa2.53□□□□□ -2
CLIP1-207ENST00000536634 SPRR1AP35321 89 aa2.52□□□□□ -2.01
CLIP1-207ENST00000536634 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
CLIP1-207ENST00000536634 Q5VV11 94 aa2.52□□□□□ -2.01
CLIP1-207ENST00000536634 TMEM254Q8TBM7 123 aa2.52□□□□□ -2.01
CLIP1-207ENST00000536634 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
CLIP1-207ENST00000536634 HCG22E2RYF7 251 aa2.5□□□□□ -2.01
CLIP1-207ENST00000536634 NREPQ16612 68 aa2.5□□□□□ -2.01
CLIP1-207ENST00000536634 ZNF625Q96I27 306 aaPredicted RBP2.5□□□□□ -2.01
CLIP1-207ENST00000536634 Q9BRP9 147 aa2.5□□□□□ -2.01
CLIP1-207ENST00000536634 UBL5Q9BZL1 73 aa2.5□□□□□ -2.01
CLIP1-207ENST00000536634 KCNQ1DNQ9H478 68 aa2.5□□□□□ -2.01
CLIP1-207ENST00000536634 C14orf132Q9NPU4 83 aa2.5□□□□□ -2.01
CLIP1-207ENST00000536634 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
CLIP1-207ENST00000536634 ETDCA0A1B0GVM5 59 aa2.49□□□□□ -2.01
CLIP1-207ENST00000536634 JMJD7-PLA2G4BH0Y9G9 81 aa2.49□□□□□ -2.01
CLIP1-207ENST00000536634 NCR3O14931 201 aa2.49□□□□□ -2.01
CLIP1-207ENST00000536634 PSPHP1O15172 72 aa2.49□□□□□ -2.01
CLIP1-207ENST00000536634 LIMD2Q9BT23 127 aa2.49□□□□□ -2.01
CLIP1-207ENST00000536634 IGHV6-1A0A0B4J1U7 121 aa2.48□□□□□ -2.01
CLIP1-207ENST00000536634 LOC101927531A0A1B0GV80 90 aa2.48□□□□□ -2.01
CLIP1-207ENST00000536634 H0YGX0 51 aa2.48□□□□□ -2.01
CLIP1-207ENST00000536634 COX17Q14061 63 aa2.48□□□□□ -2.01
CLIP1-207ENST00000536634 C6orf99Q4VX62 202 aa2.48□□□□□ -2.01
CLIP1-207ENST00000536634 C1orf64Q8NEQ6 169 aa2.48□□□□□ -2.01
CLIP1-207ENST00000536634 ST20-AS1Q8NBB2 130 aa2.47□□□□□ -2.01
CLIP1-207ENST00000536634 SPTSSBQ8NFR3 76 aa2.47□□□□□ -2.01
CLIP1-207ENST00000536634 KMT2DO14686 5537 aa2.46□□□□□ -2.02
CLIP1-207ENST00000536634 CHKB-CPT1BH3BT56 60 aa2.46□□□□□ -2.02
CLIP1-207ENST00000536634 ELOF1P60002 83 aaKnown RBP2.46□□□□□ -2.02
CLIP1-207ENST00000536634 LINC00308Q8TCZ7 52 aa2.46□□□□□ -2.02
CLIP1-207ENST00000536634 ZCCHC13Q8WW36 166 aaKnown RBP2.46□□□□□ -2.02
CLIP1-207ENST00000536634 LOC110117498A0A087WWA1 95 aa2.45□□□□□ -2.02
CLIP1-207ENST00000536634 A8MUU9 505 aa2.45□□□□□ -2.02
CLIP1-207ENST00000536634 IGKV4-1P06312 121 aa2.45□□□□□ -2.02
CLIP1-207ENST00000536634 LINC00158P58513 81 aa2.45□□□□□ -2.02
CLIP1-207ENST00000536634 Q6ZRX8 168 aa2.45□□□□□ -2.02
CLIP1-207ENST00000536634 MIR7-3HGQ8N6C7 128 aa2.45□□□□□ -2.02
CLIP1-207ENST00000536634 ORMDL1Q9P0S3 153 aa2.45□□□□□ -2.02
CLIP1-207ENST00000536634 BPY2O14599 106 aa2.44□□□□□ -2.02
CLIP1-207ENST00000536634 A0A0G2JQZ4 141 aa2.43□□□□□ -2.02
CLIP1-207ENST00000536634 A0A1B0GW54 56 aa2.43□□□□□ -2.02
CLIP1-207ENST00000536634 A6NED7 52 aa2.43□□□□□ -2.02
CLIP1-207ENST00000536634 PDE6GP18545 87 aa2.43□□□□□ -2.02
CLIP1-207ENST00000536634 SPRR1BP22528 89 aa2.42□□□□□ -2.02
CLIP1-207ENST00000536634 CASC2Q6XLA1 102 aa2.42□□□□□ -2.02
CLIP1-207ENST00000536634 Q6ZQT0 140 aa2.42□□□□□ -2.02
CLIP1-207ENST00000536634 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
CLIP1-207ENST00000536634 NDUFB1O75438 58 aa2.41□□□□□ -2.02
CLIP1-207ENST00000536634 C20orf166-AS1Q96NR2 134 aa2.41□□□□□ -2.02
CLIP1-207ENST00000536634 H3BQ85 93 aa2.4□□□□□ -2.03
CLIP1-207ENST00000536634 SPANXA2-OT1Q8N9U9 137 aa2.4□□□□□ -2.03
CLIP1-207ENST00000536634 SMIM11BQ8TCY0 68 aa2.4□□□□□ -2.03
CLIP1-207ENST00000536634 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
CLIP1-207ENST00000536634 LINC00208Q96KT6 92 aa2.38□□□□□ -2.03
CLIP1-207ENST00000536634 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
CLIP1-207ENST00000536634 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
CLIP1-207ENST00000536634 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
CLIP1-207ENST00000536634 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
CLIP1-207ENST00000536634 A0A1W2PNM2 257 aa2.36□□□□□ -2.03
CLIP1-207ENST00000536634 ROMO1P60602 79 aa2.36□□□□□ -2.03
CLIP1-207ENST00000536634 ADM2Q7Z4H4 148 aa2.36□□□□□ -2.03
CLIP1-207ENST00000536634 DEFB105AQ8NG35 78 aa2.36□□□□□ -2.03
CLIP1-207ENST00000536634 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
CLIP1-207ENST00000536634 H3BPC8 53 aa2.35□□□□□ -2.03
CLIP1-207ENST00000536634 HRES1P13985 223 aa2.35□□□□□ -2.03
CLIP1-207ENST00000536634 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
CLIP1-207ENST00000536634 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
CLIP1-207ENST00000536634 Q96NJ1 140 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms