RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 C9JAW5 83 aa3.34□□□□□ -1.87
CLIP1-206ENST00000535290 MT3P25713 68 aa3.34□□□□□ -1.87
CLIP1-206ENST00000535290 Q5W150 140 aa3.34□□□□□ -1.87
CLIP1-206ENST00000535290 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
CLIP1-206ENST00000535290 MT4P47944 62 aa3.32□□□□□ -1.88
CLIP1-206ENST00000535290 MRPL34Q9BQ48 92 aaKnown RBP3.32□□□□□ -1.88
CLIP1-206ENST00000535290 J3QR89 54 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BKO60814 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BJP06899 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BOP23527 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BBP33778 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BDP58876 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BCP62807 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST2H2BEQ16778 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BHQ93079 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BNQ99877 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 HIST1H2BMQ99879 126 aa3.31□□□□□ -1.88
CLIP1-206ENST00000535290 Q6ZQT0 140 aa3.3□□□□□ -1.88
CLIP1-206ENST00000535290 TMEM254Q8TBM7 123 aa3.3□□□□□ -1.88
CLIP1-206ENST00000535290 ORMDL1Q9P0S3 153 aa3.3□□□□□ -1.88
CLIP1-206ENST00000535290 MMP24-AS1A0A0U1RRL7 71 aa3.29□□□□□ -1.88
CLIP1-206ENST00000535290 S100A2P29034 98 aa3.29□□□□□ -1.88
CLIP1-206ENST00000535290 TMEM256-PLSCR3K7ERE1 68 aa3.28□□□□□ -1.88
CLIP1-206ENST00000535290 M0R143 59 aa3.28□□□□□ -1.88
CLIP1-206ENST00000535290 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
CLIP1-206ENST00000535290 A8MUN3 132 aa3.27□□□□□ -1.89
CLIP1-206ENST00000535290 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
CLIP1-206ENST00000535290 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
CLIP1-206ENST00000535290 CEND1Q8N111 149 aa3.27□□□□□ -1.89
CLIP1-206ENST00000535290 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
CLIP1-206ENST00000535290 K7EQZ3 153 aa3.26□□□□□ -1.89
CLIP1-206ENST00000535290 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
CLIP1-206ENST00000535290 A0A0B4J2C4 111 aa3.25□□□□□ -1.89
CLIP1-206ENST00000535290 hDV103S1A0JD37 113 aa3.25□□□□□ -1.89
CLIP1-206ENST00000535290 H3BQ85 93 aa3.25□□□□□ -1.89
CLIP1-206ENST00000535290 DNAL4O96015 105 aa3.25□□□□□ -1.89
CLIP1-206ENST00000535290 GTF2H5Q6ZYL4 71 aa3.22□□□□□ -1.89
CLIP1-206ENST00000535290 TAX1BP3O14907 124 aa3.21□□□□□ -1.9
CLIP1-206ENST00000535290 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
CLIP1-206ENST00000535290 PDE6GP18545 87 aa3.2□□□□□ -1.9
CLIP1-206ENST00000535290 COL5A1-AS1Q5SY13 56 aa3.2□□□□□ -1.9
CLIP1-206ENST00000535290 BRK1Q8WUW1 75 aa3.2□□□□□ -1.9
CLIP1-206ENST00000535290 PRO1854Q9UHT4 67 aa3.2□□□□□ -1.9
CLIP1-206ENST00000535290 A0A087WVE0 104 aa3.19□□□□□ -1.9
CLIP1-206ENST00000535290 NAA38Q9BRA0 125 aaKnown RBP3.18□□□□□ -1.9
CLIP1-206ENST00000535290 A0A1B0GW54 56 aa3.17□□□□□ -1.9
CLIP1-206ENST00000535290 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CLIP1-206ENST00000535290 HCG22E2RYF7 251 aa3.16□□□□□ -1.9
CLIP1-206ENST00000535290 COX8AP10176 69 aa3.16□□□□□ -1.9
CLIP1-206ENST00000535290 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
CLIP1-206ENST00000535290 H0YAA0 97 aa3.15□□□□□ -1.91
CLIP1-206ENST00000535290 K7ERS5 55 aa3.15□□□□□ -1.91
CLIP1-206ENST00000535290 HSD52Q0P140 79 aa3.15□□□□□ -1.91
CLIP1-206ENST00000535290 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
CLIP1-206ENST00000535290 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
CLIP1-206ENST00000535290 BPY2O14599 106 aa3.13□□□□□ -1.91
CLIP1-206ENST00000535290 NREPQ16612 68 aa3.13□□□□□ -1.91
CLIP1-206ENST00000535290 HIST3H2BBQ8N257 126 aa3.13□□□□□ -1.91
CLIP1-206ENST00000535290 CYSTM1Q9H1C7 97 aa3.13□□□□□ -1.91
CLIP1-206ENST00000535290 CCDC179H3BU77 68 aa3.12□□□□□ -1.91
CLIP1-206ENST00000535290 FXYD2P54710 66 aa3.12□□□□□ -1.91
CLIP1-206ENST00000535290 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
CLIP1-206ENST00000535290 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
CLIP1-206ENST00000535290 K7ERJ3 54 aa3.11□□□□□ -1.91
CLIP1-206ENST00000535290 BAALC-AS2P0C853 105 aa3.11□□□□□ -1.91
CLIP1-206ENST00000535290 TMEM258P61165 79 aa3.11□□□□□ -1.91
CLIP1-206ENST00000535290 HIST1H4AP62805 103 aaKnown RBP3.11□□□□□ -1.91
CLIP1-206ENST00000535290 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
CLIP1-206ENST00000535290 HIGD1BQ9P298 99 aa3.11□□□□□ -1.91
CLIP1-206ENST00000535290 LOC110117498A0A087WWA1 95 aa3.1□□□□□ -1.91
CLIP1-206ENST00000535290 MT1EP04732 61 aa3.1□□□□□ -1.91
CLIP1-206ENST00000535290 COX6CP09669 75 aa3.1□□□□□ -1.91
CLIP1-206ENST00000535290 HIST1H2BLQ99880 126 aa3.1□□□□□ -1.91
CLIP1-206ENST00000535290 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
CLIP1-206ENST00000535290 CASC2Q6XLA1 102 aa3.09□□□□□ -1.91
CLIP1-206ENST00000535290 A6NED7 52 aa3.08□□□□□ -1.92
CLIP1-206ENST00000535290 UQCRQO14949 82 aa3.08□□□□□ -1.92
CLIP1-206ENST00000535290 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CLIP1-206ENST00000535290 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
CLIP1-206ENST00000535290 Q8N9L7 120 aa3.07□□□□□ -1.92
CLIP1-206ENST00000535290 R4GN34 69 aa3.07□□□□□ -1.92
CLIP1-206ENST00000535290 NDUFC1O43677 76 aa3.05□□□□□ -1.92
CLIP1-206ENST00000535290 PYY3Q5JQD4 70 aa3.05□□□□□ -1.92
CLIP1-206ENST00000535290 C14orf132Q9NPU4 83 aa3.05□□□□□ -1.92
CLIP1-206ENST00000535290 JMJD7-PLA2G4BH0Y9G9 81 aa3.04□□□□□ -1.92
CLIP1-206ENST00000535290 M0QZ58 72 aa3.04□□□□□ -1.92
CLIP1-206ENST00000535290 VAMP8Q9BV40 100 aa3.03□□□□□ -1.92
CLIP1-206ENST00000535290 P0C880 135 aa3.02□□□□□ -1.93
CLIP1-206ENST00000535290 MT1GP13640 62 aa3.02□□□□□ -1.93
CLIP1-206ENST00000535290 H3BT86 120 aa3.01□□□□□ -1.93
CLIP1-206ENST00000535290 SERP1Q9Y6X1 66 aa3.01□□□□□ -1.93
CLIP1-206ENST00000535290 SPATA45Q537H7 98 aa2.99□□□□□ -1.93
CLIP1-206ENST00000535290 K7EP34 96 aa2.98□□□□□ -1.93
CLIP1-206ENST00000535290 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
CLIP1-206ENST00000535290 MT1MQ8N339 61 aa2.98□□□□□ -1.93
CLIP1-206ENST00000535290 CYP4F30PQ9H0H9 118 aa2.98□□□□□ -1.93
CLIP1-206ENST00000535290 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
CLIP1-206ENST00000535290 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
CLIP1-206ENST00000535290 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms