RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 KRTAP3-1Q9BYR8 98 aa4.06□□□□□ -1.76
MALAT1-202ENST00000534336 KMT2AQ03164 3969 aa4.01□□□□□ -1.77
MALAT1-202ENST00000534336 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
MALAT1-202ENST00000534336 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
MALAT1-202ENST00000534336 FRAS1Q86XX4 4008 aa3.96□□□□□ -1.77
MALAT1-202ENST00000534336 HECTD4Q9Y4D8 3996 aa3.93□□□□□ -1.78
MALAT1-202ENST00000534336 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
MALAT1-202ENST00000534336 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
MALAT1-202ENST00000534336 DNAH6Q9C0G6 4158 aa3.87□□□□□ -1.79
MALAT1-202ENST00000534336 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
MALAT1-202ENST00000534336 KRTAP3-2Q9BYR7 98 aa3.84□□□□□ -1.79
MALAT1-202ENST00000534336 ZNF469Q96JG9 3925 aaPredicted RBP3.84□□□□□ -1.79
MALAT1-202ENST00000534336 KRTAP3-3Q9BYR6 98 aa3.83□□□□□ -1.8
MALAT1-202ENST00000534336 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
MALAT1-202ENST00000534336 DNAH2Q9P225 4427 aa3.77□□□□□ -1.81
MALAT1-202ENST00000534336 HUWE1Q7Z6Z7 4374 aaKnown RBP3.68□□□□□ -1.82
MALAT1-202ENST00000534336 DNAH1Q9P2D7 4330 aa3.65□□□□□ -1.82
MALAT1-202ENST00000534336 PRKDCP78527 4128 aaKnown RBP3.64□□□□□ -1.83
MALAT1-202ENST00000534336 LORP23490 312 aaPredicted RBP3.64□□□□□ -1.83
MALAT1-202ENST00000534336 KRTAP10-4P60372 401 aaPredicted RBP3.62□□□□□ -1.83
MALAT1-202ENST00000534336 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
MALAT1-202ENST00000534336 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
MALAT1-202ENST00000534336 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
MALAT1-202ENST00000534336 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
MALAT1-202ENST00000534336 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
MALAT1-202ENST00000534336 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
MALAT1-202ENST00000534336 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
MALAT1-202ENST00000534336 SPRR2EP22531 72 aa3.33□□□□□ -1.88
MALAT1-202ENST00000534336 SPRR2BP35325 72 aa3.33□□□□□ -1.88
MALAT1-202ENST00000534336 SPRR2AP35326 72 aa3.33□□□□□ -1.88
MALAT1-202ENST00000534336 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
MALAT1-202ENST00000534336 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
MALAT1-202ENST00000534336 PKHD1P08F94 4074 aa3.28□□□□□ -1.88
MALAT1-202ENST00000534336 LCE2BO14633 110 aa3.28□□□□□ -1.88
MALAT1-202ENST00000534336 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
MALAT1-202ENST00000534336 MT1HP80294 61 aa3.26□□□□□ -1.89
MALAT1-202ENST00000534336 VPS13DQ5THJ4 4388 aa3.25□□□□□ -1.89
MALAT1-202ENST00000534336 SPRR2DP22532 72 aa3.24□□□□□ -1.89
MALAT1-202ENST00000534336 KRTAP4-5Q9BYR2 181 aa3.23□□□□□ -1.89
MALAT1-202ENST00000534336 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
MALAT1-202ENST00000534336 FAT2Q9NYQ8 4349 aa3.22□□□□□ -1.89
MALAT1-202ENST00000534336 DNAH10Q8IVF4 4471 aa3.19□□□□□ -1.9
MALAT1-202ENST00000534336 DNAH8Q96JB1 4490 aa3.19□□□□□ -1.9
MALAT1-202ENST00000534336 DNAH17Q9UFH2 4485 aa3.19□□□□□ -1.9
MALAT1-202ENST00000534336 MT2AP02795 61 aa3.16□□□□□ -1.9
MALAT1-202ENST00000534336 MT1GP13640 62 aa3.14□□□□□ -1.91
MALAT1-202ENST00000534336 DYNC2H1Q8NCM8 4307 aaKnown RBP3.12□□□□□ -1.91
MALAT1-202ENST00000534336 LCE2CQ5TA81 110 aa3.1□□□□□ -1.91
MALAT1-202ENST00000534336 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.92
MALAT1-202ENST00000534336 MT1FP04733 61 aa3.06□□□□□ -1.92
MALAT1-202ENST00000534336 PRM1P04553 51 aa3.04□□□□□ -1.92
MALAT1-202ENST00000534336 DNAH11Q96DT5 4516 aa3□□□□□ -1.93
MALAT1-202ENST00000534336 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
MALAT1-202ENST00000534336 PKD1P98161 4303 aa2.99□□□□□ -1.93
MALAT1-202ENST00000534336 LCE2DQ5TA82 110 aaPredicted RBP2.98□□□□□ -1.93
MALAT1-202ENST00000534336 DNAH5Q8TE73 4624 aa2.95□□□□□ -1.94
MALAT1-202ENST00000534336 DNAH9Q9NYC9 4486 aa2.94□□□□□ -1.94
MALAT1-202ENST00000534336 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
MALAT1-202ENST00000534336 MT1LQ93083 61 aa2.93□□□□□ -1.94
MALAT1-202ENST00000534336 MT1XP80297 61 aa2.92□□□□□ -1.94
MALAT1-202ENST00000534336 TNXBP22105 4242 aa2.91□□□□□ -1.94
MALAT1-202ENST00000534336 RYR1P21817 5038 aa2.88□□□□□ -1.95
MALAT1-202ENST00000534336 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
MALAT1-202ENST00000534336 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
MALAT1-202ENST00000534336 HSPG2P98160 4391 aa2.86□□□□□ -1.95
MALAT1-202ENST00000534336 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
MALAT1-202ENST00000534336 MT4P47944 62 aa2.84□□□□□ -1.95
MALAT1-202ENST00000534336 PLECQ15149 4684 aaKnown RBP2.83□□□□□ -1.96
MALAT1-202ENST00000534336 KRTAP19-1Q8IUB9 90 aa2.81□□□□□ -1.96
MALAT1-202ENST00000534336 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
MALAT1-202ENST00000534336 MT1EP04732 61 aa2.76□□□□□ -1.97
MALAT1-202ENST00000534336 STARD9Q9P2P6 4700 aa2.76□□□□□ -1.97
MALAT1-202ENST00000534336 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
MALAT1-202ENST00000534336 FAT1Q14517 4588 aa2.75□□□□□ -1.97
MALAT1-202ENST00000534336 KRTAP4-8A0A0G2JLE6 195 aa2.73□□□□□ -1.97
MALAT1-202ENST00000534336 KRTAP4-8Q9BYQ9 185 aa2.73□□□□□ -1.97
MALAT1-202ENST00000534336 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
MALAT1-202ENST00000534336 APOBP04114 4563 aaKnown RBP2.7□□□□□ -1.98
MALAT1-202ENST00000534336 SACSQ9NZJ4 4579 aa2.69□□□□□ -1.98
MALAT1-202ENST00000534336 MT1MQ8N339 61 aa2.68□□□□□ -1.98
MALAT1-202ENST00000534336 RYR2Q92736 4967 aa2.68□□□□□ -1.98
MALAT1-202ENST00000534336 MT1BP07438 61 aa2.66□□□□□ -1.98
MALAT1-202ENST00000534336 RYR3Q15413 4870 aa2.66□□□□□ -1.98
MALAT1-202ENST00000534336 LCE1CQ5T751 118 aa2.65□□□□□ -1.98
MALAT1-202ENST00000534336 LCE1EQ5T753 118 aa2.65□□□□□ -1.98
MALAT1-202ENST00000534336 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
MALAT1-202ENST00000534336 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.98
MALAT1-202ENST00000534336 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.98
MALAT1-202ENST00000534336 PCLOQ9Y6V0 5065 aa2.63□□□□□ -1.99
MALAT1-202ENST00000534336 KRTAP9-8Q9BYQ0 159 aa2.63□□□□□ -1.99
MALAT1-202ENST00000534336 DNHD1Q96M86 4753 aa2.63□□□□□ -1.99
MALAT1-202ENST00000534336 MT1AP04731 61 aa2.62□□□□□ -1.99
MALAT1-202ENST00000534336 KIAA1109Q2LD37 5005 aa2.61□□□□□ -1.99
MALAT1-202ENST00000534336 LRP1BQ9NZR2 4599 aa2.6□□□□□ -1.99
MALAT1-202ENST00000534336 HERC1Q15751 4861 aa2.6□□□□□ -1.99
MALAT1-202ENST00000534336 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
MALAT1-202ENST00000534336 MYCBP2O75592 4640 aa2.57□□□□□ -2
MALAT1-202ENST00000534336 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
MALAT1-202ENST00000534336 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
MALAT1-202ENST00000534336 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms