RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 NDUFA1O15239 70 aa0.84□□□□□ -2.27
HIPK3-206ENST00000534262 ENHOQ6UWT2 76 aa0.84□□□□□ -2.27
HIPK3-206ENST00000534262 STARD9Q9P2P6 4700 aa0.84□□□□□ -2.28
HIPK3-206ENST00000534262 FRAS1Q86XX4 4008 aa0.84□□□□□ -2.28
HIPK3-206ENST00000534262 HERC1Q15751 4861 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 UBR4Q5T4S7 5183 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 TRBV6-1A0A0K0K1D8 114 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 LINC01549A6NIU2 74 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 IGLC2P0DOY2 106 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 CNFNQ9BYD5 112 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 TMEM167BQ9NRX6 74 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 DNAH17Q9UFH2 4485 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 HSPG2P98160 4391 aa0.83□□□□□ -2.28
HIPK3-206ENST00000534262 PLECQ15149 4684 aaKnown RBP0.83□□□□□ -2.28
HIPK3-206ENST00000534262 DNAH5Q8TE73 4624 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 DNAH6Q9C0G6 4158 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 VPS13BQ7Z7G8 4022 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 FXYD6-FXYD2A0A087WZ82 144 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 IAPPP10997 89 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 WFDC2Q14508 124 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 KRTAP20-1Q3LI63 56 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 Q5BKY6 102 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 PKD1P98161 4303 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 FAT2Q9NYQ8 4349 aa0.82□□□□□ -2.28
HIPK3-206ENST00000534262 ABCA13Q86UQ4 5058 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 LRP1BQ9NZR2 4599 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 A0A096LNI7 61 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 LINC00959A0A1B0GUT2 108 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 H0Y9P7 68 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 I3L3M4 83 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 KRTAP2-3P0C7H8 128 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 SERF2P84101 59 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 PEA15Q15121 130 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 ALKAL2Q6UX46 152 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 KRTAP2-4Q9BYR9 128 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 KRTAP2-1Q9BYU5 128 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 APOBP04114 4563 aaKnown RBP0.81□□□□□ -2.28
HIPK3-206ENST00000534262 DNAH2Q9P225 4427 aa0.81□□□□□ -2.28
HIPK3-206ENST00000534262 VPS13DQ5THJ4 4388 aa0.8□□□□□ -2.28
HIPK3-206ENST00000534262 FCER1GP30273 86 aa0.8□□□□□ -2.28
HIPK3-206ENST00000534262 DEFB1P60022 68 aa0.8□□□□□ -2.28
HIPK3-206ENST00000534262 FXYD6Q9H0Q3 95 aa0.8□□□□□ -2.28
HIPK3-206ENST00000534262 DYNC1H1Q14204 4646 aaKnown RBP0.8□□□□□ -2.28
HIPK3-206ENST00000534262 GNGT1P63211 74 aa0.79□□□□□ -2.28
HIPK3-206ENST00000534262 LINC00643Q86TS7 51 aa0.79□□□□□ -2.28
HIPK3-206ENST00000534262 TOMM5Q8N4H5 51 aa0.79□□□□□ -2.28
HIPK3-206ENST00000534262 ST20Q9HBF5 79 aa0.79□□□□□ -2.28
HIPK3-206ENST00000534262 MYCBP2O75592 4640 aa0.78□□□□□ -2.28
HIPK3-206ENST00000534262 A0A087WXM4 84 aa0.78□□□□□ -2.28
HIPK3-206ENST00000534262 H3BVH4 76 aa0.78□□□□□ -2.28
HIPK3-206ENST00000534262 K7EMI3 77 aa0.78□□□□□ -2.28
HIPK3-206ENST00000534262 M0QY20 66 aa0.78□□□□□ -2.28
HIPK3-206ENST00000534262 MT1HP80294 61 aa0.78□□□□□ -2.28
HIPK3-206ENST00000534262 SPCS1Q9Y6A9 102 aa0.78□□□□□ -2.28
HIPK3-206ENST00000534262 PKHD1L1Q86WI1 4243 aa0.77□□□□□ -2.29
HIPK3-206ENST00000534262 ETDCA0A1B0GVM5 59 aa0.77□□□□□ -2.29
HIPK3-206ENST00000534262 D6R8Y8 96 aa0.77□□□□□ -2.29
HIPK3-206ENST00000534262 IFI27P40305 119 aaPredicted RBP0.77□□□□□ -2.29
HIPK3-206ENST00000534262 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
HIPK3-206ENST00000534262 CLPSL2Q6UWE3 100 aa0.77□□□□□ -2.29
HIPK3-206ENST00000534262 MUSTN1Q8IVN3 82 aa0.77□□□□□ -2.29
HIPK3-206ENST00000534262 Q8IZM0 81 aa0.77□□□□□ -2.29
HIPK3-206ENST00000534262 TP53AIP1Q9HCN2 124 aa0.77□□□□□ -2.29
HIPK3-206ENST00000534262 HMCN2Q8NDA2 5059 aa0.76□□□□□ -2.29
HIPK3-206ENST00000534262 UMAD1C9J7I0 102 aa0.76□□□□□ -2.29
HIPK3-206ENST00000534262 LEPROTL1O95214 131 aa0.76□□□□□ -2.29
HIPK3-206ENST00000534262 C3orf79P0CE67 100 aa0.76□□□□□ -2.29
HIPK3-206ENST00000534262 IGLC3P0DOY3 106 aa0.76□□□□□ -2.29
HIPK3-206ENST00000534262 KRTAP19-6Q3LI70 58 aa0.76□□□□□ -2.29
HIPK3-206ENST00000534262 RNF213Q63HN8 5207 aa0.75□□□□□ -2.29
HIPK3-206ENST00000534262 LRP2P98164 4655 aa0.75□□□□□ -2.29
HIPK3-206ENST00000534262 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
HIPK3-206ENST00000534262 MUC2Q02817 5179 aa0.75□□□□□ -2.29
HIPK3-206ENST00000534262 FAT1Q14517 4588 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 TRBV7-4A0A0J9YYF1 115 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 MYMXA0A1B0GTQ4 84 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 ACYP1P07311 99 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 POLR2KP53803 58 aaKnown RBP0.74□□□□□ -2.29
HIPK3-206ENST00000534262 S100ZQ8WXG8 99 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 KCNQ1DNQ9H478 68 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 TOMM7Q9P0U1 55 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 C6orf48Q9UBA6 75 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 FAT4Q6V0I7 4981 aa0.74□□□□□ -2.29
HIPK3-206ENST00000534262 FSIP2Q5CZC0 6907 aa0.73□□□□□ -2.29
HIPK3-206ENST00000534262 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
HIPK3-206ENST00000534262 A0A1B0GU69 56 aa0.73□□□□□ -2.29
HIPK3-206ENST00000534262 A0A1B0GUT8 65 aa0.73□□□□□ -2.29
HIPK3-206ENST00000534262 TNXBP22105 4242 aa0.73□□□□□ -2.29
HIPK3-206ENST00000534262 FAT3Q8TDW7 4589 aa0.72□□□□□ -2.29
HIPK3-206ENST00000534262 LRP1Q07954 4544 aaKnown RBP0.72□□□□□ -2.29
HIPK3-206ENST00000534262 CRIP1P50238 77 aa0.72□□□□□ -2.29
HIPK3-206ENST00000534262 WFDC13Q8IUB5 93 aa0.72□□□□□ -2.29
HIPK3-206ENST00000534262 SMIM2Q9BVW6 85 aa0.72□□□□□ -2.29
HIPK3-206ENST00000534262 CRIPTQ9P021 101 aa0.72□□□□□ -2.29
HIPK3-206ENST00000534262 C9orf92A6NGG3 77 aa0.71□□□□□ -2.3
HIPK3-206ENST00000534262 SPRR1BP22528 89 aa0.71□□□□□ -2.3
HIPK3-206ENST00000534262 LINC00158P58513 81 aa0.71□□□□□ -2.3
HIPK3-206ENST00000534262 DNAH8Q96JB1 4490 aa0.7□□□□□ -2.3
HIPK3-206ENST00000534262 SSPOA2VEC9 5147 aa0.7□□□□□ -2.3
HIPK3-206ENST00000534262 NDUFB1O75438 58 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms