RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 C6orf48Q9UBA6 75 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 ABCA1O95477 2261 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 NBDYA0A0U1RRE5 68 aa1.82□□□□□ -2.12
CSMD3-210ENST00000534172 KRTAP10-10P60014 251 aa1.82□□□□□ -2.12
CSMD3-210ENST00000534172 DEFB133Q30KQ1 61 aa1.82□□□□□ -2.12
CSMD3-210ENST00000534172 C4orf3Q8WVX3 66 aa1.82□□□□□ -2.12
CSMD3-210ENST00000534172 ROS1P08922 2347 aa1.82□□□□□ -2.12
CSMD3-210ENST00000534172 FAT3Q8TDW7 4589 aa1.82□□□□□ -2.12
CSMD3-210ENST00000534172 RNF213Q63HN8 5207 aa1.81□□□□□ -2.12
CSMD3-210ENST00000534172 GVQW2A0A096LPI5 108 aaPredicted RBP1.81□□□□□ -2.12
CSMD3-210ENST00000534172 TPRXLQ17RH7 258 aa1.81□□□□□ -2.12
CSMD3-210ENST00000534172 LRP1BQ9NZR2 4599 aa1.81□□□□□ -2.12
CSMD3-210ENST00000534172 SSBP3-AS1Q7Z2R9 100 aa1.81□□□□□ -2.12
CSMD3-210ENST00000534172 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
CSMD3-210ENST00000534172 LY6G6CO95867 125 aa1.8□□□□□ -2.12
CSMD3-210ENST00000534172 DEFB1P60022 68 aa1.8□□□□□ -2.12
CSMD3-210ENST00000534172 RPL37AP61513 92 aaKnown RBP1.8□□□□□ -2.12
CSMD3-210ENST00000534172 PP632Q6XCG6 107 aa1.8□□□□□ -2.12
CSMD3-210ENST00000534172 SPACA4Q8TDM5 124 aa1.8□□□□□ -2.12
CSMD3-210ENST00000534172 PLECQ15149 4684 aaKnown RBP1.8□□□□□ -2.12
CSMD3-210ENST00000534172 SSPOA2VEC9 5147 aa1.8□□□□□ -2.12
CSMD3-210ENST00000534172 DEFB131AP59861 70 aa1.8□□□□□ -2.12
CSMD3-210ENST00000534172 C5orf56Q8N8D9 126 aa1.8□□□□□ -2.12
CSMD3-210ENST00000534172 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
CSMD3-210ENST00000534172 SPINK13Q1W4C9 94 aa1.79□□□□□ -2.12
CSMD3-210ENST00000534172 RHPN1-AS1Q9BWJ2 59 aa1.79□□□□□ -2.12
CSMD3-210ENST00000534172 FAT2Q9NYQ8 4349 aa1.79□□□□□ -2.12
CSMD3-210ENST00000534172 MMP24-AS1A0A0U1RRL7 71 aa1.79□□□□□ -2.12
CSMD3-210ENST00000534172 H3BUA1 57 aa1.79□□□□□ -2.12
CSMD3-210ENST00000534172 HUWE1Q7Z6Z7 4374 aaKnown RBP1.79□□□□□ -2.12
CSMD3-210ENST00000534172 STAB2Q8WWQ8 2551 aa1.78□□□□□ -2.12
CSMD3-210ENST00000534172 PKHD1P08F94 4074 aa1.78□□□□□ -2.12
CSMD3-210ENST00000534172 K7EIL1 84 aa1.78□□□□□ -2.12
CSMD3-210ENST00000534172 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
CSMD3-210ENST00000534172 USMG5Q96IX5 58 aa1.78□□□□□ -2.12
CSMD3-210ENST00000534172 DNAH11Q96DT5 4516 aa1.78□□□□□ -2.12
CSMD3-210ENST00000534172 WNK2Q9Y3S1 2297 aa1.78□□□□□ -2.13
CSMD3-210ENST00000534172 DEFB105AQ8NG35 78 aa1.77□□□□□ -2.13
CSMD3-210ENST00000534172 HSPG2P98160 4391 aa1.77□□□□□ -2.13
CSMD3-210ENST00000534172 CLPSL2Q6UWE3 100 aa1.76□□□□□ -2.13
CSMD3-210ENST00000534172 Q6ZRX8 168 aa1.76□□□□□ -2.13
CSMD3-210ENST00000534172 FRAS1Q86XX4 4008 aa1.76□□□□□ -2.13
CSMD3-210ENST00000534172 MYCBP2O75592 4640 aa1.76□□□□□ -2.13
CSMD3-210ENST00000534172 DNAH6Q9C0G6 4158 aa1.75□□□□□ -2.13
CSMD3-210ENST00000534172 HTN1P15515 57 aa1.75□□□□□ -2.13
CSMD3-210ENST00000534172 MRPL34Q9BQ48 92 aaKnown RBP1.75□□□□□ -2.13
CSMD3-210ENST00000534172 H0YAA0 97 aa1.74□□□□□ -2.13
CSMD3-210ENST00000534172 UNQ6190/PRO20217Q6UXQ8 127 aa1.74□□□□□ -2.13
CSMD3-210ENST00000534172 G3V318 75 aa1.74□□□□□ -2.13
CSMD3-210ENST00000534172 STARD9Q9P2P6 4700 aa1.73□□□□□ -2.13
CSMD3-210ENST00000534172 DNAH17Q9UFH2 4485 aa1.73□□□□□ -2.13
CSMD3-210ENST00000534172 SPRR1AP35321 89 aa1.73□□□□□ -2.13
CSMD3-210ENST00000534172 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
CSMD3-210ENST00000534172 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
CSMD3-210ENST00000534172 LELP1Q5T871 98 aa1.73□□□□□ -2.13
CSMD3-210ENST00000534172 DNAH2Q9P225 4427 aa1.73□□□□□ -2.13
CSMD3-210ENST00000534172 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
CSMD3-210ENST00000534172 COX6B2Q6YFQ2 88 aa1.72□□□□□ -2.13
CSMD3-210ENST00000534172 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
CSMD3-210ENST00000534172 Q6ZSA8 131 aa1.71□□□□□ -2.14
CSMD3-210ENST00000534172 VPS13BQ7Z7G8 4022 aa1.71□□□□□ -2.14
CSMD3-210ENST00000534172 PKHD1L1Q86WI1 4243 aa1.71□□□□□ -2.14
CSMD3-210ENST00000534172 KRTAP10-1P60331 282 aa1.71□□□□□ -2.14
CSMD3-210ENST00000534172 H3BUX3 64 aa1.69□□□□□ -2.14
CSMD3-210ENST00000534172 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
CSMD3-210ENST00000534172 PLAC4Q8WY50 150 aa1.69□□□□□ -2.14
CSMD3-210ENST00000534172 SRRM2Q9UQ35 2752 aaKnown RBP1.68□□□□□ -2.14
CSMD3-210ENST00000534172 SPRR1BP22528 89 aa1.68□□□□□ -2.14
CSMD3-210ENST00000534172 NOP10Q9NPE3 64 aaKnown RBP1.68□□□□□ -2.14
CSMD3-210ENST00000534172 BRD3OSQ6XYD6 125 aa1.67□□□□□ -2.14
CSMD3-210ENST00000534172 DEFB130BP0DP73 79 aa1.66□□□□□ -2.14
CSMD3-210ENST00000534172 DEFB130AP0DP74 79 aa1.66□□□□□ -2.14
CSMD3-210ENST00000534172 RPL37P61927 97 aaKnown RBP1.66□□□□□ -2.14
CSMD3-210ENST00000534172 Q6ZRN7 208 aaPredicted RBP1.66□□□□□ -2.14
CSMD3-210ENST00000534172 CSMD3Q7Z407 3707 aa1.66□□□□□ -2.14
CSMD3-210ENST00000534172 INE1O15225 51 aa1.65□□□□□ -2.14
CSMD3-210ENST00000534172 LYNX1P0DP58 116 aa1.65□□□□□ -2.14
CSMD3-210ENST00000534172 PRO0255Q9UI72 69 aa1.65□□□□□ -2.15
CSMD3-210ENST00000534172 VPS13DQ5THJ4 4388 aa1.64□□□□□ -2.15
CSMD3-210ENST00000534172 PKD1P98161 4303 aa1.64□□□□□ -2.15
CSMD3-210ENST00000534172 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
CSMD3-210ENST00000534172 DEFB136Q30KP8 78 aa1.63□□□□□ -2.15
CSMD3-210ENST00000534172 C10orf95Q9H7T3 257 aa1.63□□□□□ -2.15
CSMD3-210ENST00000534172 FLG2Q5D862 2391 aaPredicted RBP1.63□□□□□ -2.15
CSMD3-210ENST00000534172 PRLHP81277 87 aa1.63□□□□□ -2.15
CSMD3-210ENST00000534172 KRTAP6-3Q3LI67 103 aa1.63□□□□□ -2.15
CSMD3-210ENST00000534172 APOBP04114 4563 aaKnown RBP1.62□□□□□ -2.15
CSMD3-210ENST00000534172 C10orf99Q6UWK7 81 aa1.62□□□□□ -2.15
CSMD3-210ENST00000534172 FAT1Q14517 4588 aa1.61□□□□□ -2.15
CSMD3-210ENST00000534172 DNAH5Q8TE73 4624 aa1.61□□□□□ -2.15
CSMD3-210ENST00000534172 UBE2DNLQ8IWF7 75 aa1.61□□□□□ -2.15
CSMD3-210ENST00000534172 SPINK1P00995 79 aa1.6□□□□□ -2.15
CSMD3-210ENST00000534172 Q5VSD8 79 aa1.6□□□□□ -2.15
CSMD3-210ENST00000534172 A0A096LPF7 62 aa1.58□□□□□ -2.16
CSMD3-210ENST00000534172 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
CSMD3-210ENST00000534172 LRP2P98164 4655 aa1.56□□□□□ -2.16
CSMD3-210ENST00000534172 S4R3F8 94 aa1.56□□□□□ -2.16
CSMD3-210ENST00000534172 NEBP20929 6669 aa1.56□□□□□ -2.16
CSMD3-210ENST00000534172 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
CSMD3-210ENST00000534172 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms