RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 A0A0G2JQZ4 141 aa3.57□□□□□ -1.84
CMTM1-220ENST00000534143 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
CMTM1-220ENST00000534143 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
CMTM1-220ENST00000534143 PRR4Q16378 134 aa3.57□□□□□ -1.84
CMTM1-220ENST00000534143 CASC2Q6XLA1 102 aa3.57□□□□□ -1.84
CMTM1-220ENST00000534143 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
CMTM1-220ENST00000534143 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
CMTM1-220ENST00000534143 TYMSOSQ8TAI1 123 aa3.56□□□□□ -1.84
CMTM1-220ENST00000534143 K7EQZ3 153 aa3.55□□□□□ -1.84
CMTM1-220ENST00000534143 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
CMTM1-220ENST00000534143 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
CMTM1-220ENST00000534143 TNXBP22105 4242 aa3.54□□□□□ -1.84
CMTM1-220ENST00000534143 A6NN06 94 aa3.53□□□□□ -1.84
CMTM1-220ENST00000534143 DSCR10P59022 87 aa3.53□□□□□ -1.84
CMTM1-220ENST00000534143 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
CMTM1-220ENST00000534143 COA5Q86WW8 74 aa3.53□□□□□ -1.84
CMTM1-220ENST00000534143 TP53AIP1Q9HCN2 124 aa3.53□□□□□ -1.84
CMTM1-220ENST00000534143 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
CMTM1-220ENST00000534143 SPAG11AQ6PDA7 123 aa3.52□□□□□ -1.85
CMTM1-220ENST00000534143 LINC00304Q8N9R0 145 aa3.52□□□□□ -1.85
CMTM1-220ENST00000534143 LINC01558Q9Y6Z2 57 aa3.52□□□□□ -1.85
CMTM1-220ENST00000534143 IGLV7-46A0A075B6I9 117 aa3.51□□□□□ -1.85
CMTM1-220ENST00000534143 SPINK1P00995 79 aa3.51□□□□□ -1.85
CMTM1-220ENST00000534143 A0A087WSZ3 146 aa3.5□□□□□ -1.85
CMTM1-220ENST00000534143 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
CMTM1-220ENST00000534143 A8MWP4 228 aa3.49□□□□□ -1.85
CMTM1-220ENST00000534143 C8orf87E5RJ46 101 aa3.47□□□□□ -1.85
CMTM1-220ENST00000534143 Q96NJ1 140 aa3.47□□□□□ -1.85
CMTM1-220ENST00000534143 LINC00472Q9H8W2 130 aa3.47□□□□□ -1.85
CMTM1-220ENST00000534143 LRP2P98164 4655 aa3.46□□□□□ -1.86
CMTM1-220ENST00000534143 LINC01554Q52M75 96 aa3.45□□□□□ -1.86
CMTM1-220ENST00000534143 DEFB116Q30KQ4 102 aa3.44□□□□□ -1.86
CMTM1-220ENST00000534143 PCOTHQ58A44 107 aa3.44□□□□□ -1.86
CMTM1-220ENST00000534143 RETNLBQ9BQ08 111 aa3.44□□□□□ -1.86
CMTM1-220ENST00000534143 ACYP2P14621 99 aa3.43□□□□□ -1.86
CMTM1-220ENST00000534143 LPAP08519 4548 aa3.43□□□□□ -1.86
CMTM1-220ENST00000534143 LINC00313P59037 77 aa3.42□□□□□ -1.86
CMTM1-220ENST00000534143 A0A1B0GU69 56 aa3.41□□□□□ -1.86
CMTM1-220ENST00000534143 RNF213Q63HN8 5207 aa3.4□□□□□ -1.86
CMTM1-220ENST00000534143 A8MU10 97 aa3.4□□□□□ -1.87
CMTM1-220ENST00000534143 MMP24-AS1A0A0U1RRL7 71 aa3.39□□□□□ -1.87
CMTM1-220ENST00000534143 SPINK7P58062 85 aa3.39□□□□□ -1.87
CMTM1-220ENST00000534143 A0A1B0GVX0 72 aa3.38□□□□□ -1.87
CMTM1-220ENST00000534143 UQCR11O14957 56 aa3.38□□□□□ -1.87
CMTM1-220ENST00000534143 HRES1P13985 223 aa3.38□□□□□ -1.87
CMTM1-220ENST00000534143 MRPL34Q9BQ48 92 aaKnown RBP3.38□□□□□ -1.87
CMTM1-220ENST00000534143 C8orf17Q9NRJ1 99 aa3.38□□□□□ -1.87
CMTM1-220ENST00000534143 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
CMTM1-220ENST00000534143 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
CMTM1-220ENST00000534143 IGHV6-1A0A0B4J1U7 121 aa3.36□□□□□ -1.87
CMTM1-220ENST00000534143 KRTAP16-1A8MUX0 517 aa3.35□□□□□ -1.87
CMTM1-220ENST00000534143 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
CMTM1-220ENST00000534143 TPRXLQ17RH7 258 aa3.34□□□□□ -1.87
CMTM1-220ENST00000534143 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.87
CMTM1-220ENST00000534143 C9orf92A6NGG3 77 aa3.33□□□□□ -1.88
CMTM1-220ENST00000534143 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
CMTM1-220ENST00000534143 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
CMTM1-220ENST00000534143 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
CMTM1-220ENST00000534143 A8MUU9 505 aa3.3□□□□□ -1.88
CMTM1-220ENST00000534143 DMAC1Q96GE9 116 aa3.3□□□□□ -1.88
CMTM1-220ENST00000534143 K7ERS5 55 aa3.29□□□□□ -1.88
CMTM1-220ENST00000534143 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
CMTM1-220ENST00000534143 MUC2Q02817 5179 aa3.29□□□□□ -1.88
CMTM1-220ENST00000534143 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
CMTM1-220ENST00000534143 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
CMTM1-220ENST00000534143 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
CMTM1-220ENST00000534143 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
CMTM1-220ENST00000534143 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
CMTM1-220ENST00000534143 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
CMTM1-220ENST00000534143 Q5W150 140 aa3.25□□□□□ -1.89
CMTM1-220ENST00000534143 ADM2Q7Z4H4 148 aa3.24□□□□□ -1.89
CMTM1-220ENST00000534143 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
CMTM1-220ENST00000534143 FAT4Q6V0I7 4981 aa3.19□□□□□ -1.9
CMTM1-220ENST00000534143 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
CMTM1-220ENST00000534143 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
CMTM1-220ENST00000534143 ROMO1P60602 79 aa3.18□□□□□ -1.9
CMTM1-220ENST00000534143 KRTAP4-1Q9BYQ7 146 aa3.18□□□□□ -1.9
CMTM1-220ENST00000534143 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CMTM1-220ENST00000534143 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
CMTM1-220ENST00000534143 A0A1B0GU33 70 aa3.12□□□□□ -1.91
CMTM1-220ENST00000534143 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
CMTM1-220ENST00000534143 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
CMTM1-220ENST00000534143 H1FX-AS1Q4G0G2 97 aa3.09□□□□□ -1.91
CMTM1-220ENST00000534143 COX6B2Q6YFQ2 88 aa3.08□□□□□ -1.92
CMTM1-220ENST00000534143 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
CMTM1-220ENST00000534143 H0YAA0 97 aa3.04□□□□□ -1.92
CMTM1-220ENST00000534143 CRIPTQ9P021 101 aa3.03□□□□□ -1.92
CMTM1-220ENST00000534143 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
CMTM1-220ENST00000534143 MT1HP80294 61 aa2.98□□□□□ -1.93
CMTM1-220ENST00000534143 FLGP20930 4061 aaPredicted RBP2.98□□□□□ -1.93
CMTM1-220ENST00000534143 P0C880 135 aa2.97□□□□□ -1.93
CMTM1-220ENST00000534143 S4R3F8 94 aa2.97□□□□□ -1.93
CMTM1-220ENST00000534143 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
CMTM1-220ENST00000534143 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
CMTM1-220ENST00000534143 M0R2T5 61 aa2.9□□□□□ -1.95
CMTM1-220ENST00000534143 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
CMTM1-220ENST00000534143 A0A0D9SG42 100 aa2.88□□□□□ -1.95
CMTM1-220ENST00000534143 MT2AP02795 61 aa2.84□□□□□ -1.95
CMTM1-220ENST00000534143 MT1FP04733 61 aa2.82□□□□□ -1.96
CMTM1-220ENST00000534143 M0QZ58 72 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms