RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
SOX9-AS1-212ENST00000533232 UQCR11O14957 56 aa4.35□□□□□ -1.71
SOX9-AS1-212ENST00000533232 SEC61GP60059 68 aa4.34□□□□□ -1.71
SOX9-AS1-212ENST00000533232 PKD1P98161 4303 aa4.34□□□□□ -1.71
SOX9-AS1-212ENST00000533232 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
SOX9-AS1-212ENST00000533232 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
SOX9-AS1-212ENST00000533232 C20orf166-AS1Q96NR2 134 aa4.31□□□□□ -1.72
SOX9-AS1-212ENST00000533232 A8MUU9 505 aa4.3□□□□□ -1.72
SOX9-AS1-212ENST00000533232 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
SOX9-AS1-212ENST00000533232 FAT2Q9NYQ8 4349 aa4.29□□□□□ -1.72
SOX9-AS1-212ENST00000533232 DNHD1Q96M86 4753 aa4.28□□□□□ -1.72
SOX9-AS1-212ENST00000533232 A0A1B0GVY2 172 aa4.27□□□□□ -1.73
SOX9-AS1-212ENST00000533232 SMR3BP02814 79 aaPredicted RBP4.27□□□□□ -1.73
SOX9-AS1-212ENST00000533232 HYDINQ4G0P3 5121 aa4.25□□□□□ -1.73
SOX9-AS1-212ENST00000533232 C9orf92A6NGG3 77 aa4.24□□□□□ -1.73
SOX9-AS1-212ENST00000533232 VPS13BQ7Z7G8 4022 aa4.24□□□□□ -1.73
SOX9-AS1-212ENST00000533232 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
SOX9-AS1-212ENST00000533232 SACSQ9NZJ4 4579 aa4.22□□□□□ -1.73
SOX9-AS1-212ENST00000533232 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
SOX9-AS1-212ENST00000533232 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
SOX9-AS1-212ENST00000533232 A0A1B0GU33 70 aa4.16□□□□□ -1.74
SOX9-AS1-212ENST00000533232 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.74
SOX9-AS1-212ENST00000533232 DYNC1H1Q14204 4646 aaKnown RBP4.14□□□□□ -1.75
SOX9-AS1-212ENST00000533232 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
SOX9-AS1-212ENST00000533232 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
SOX9-AS1-212ENST00000533232 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
SOX9-AS1-212ENST00000533232 K7ERS5 55 aa4.12□□□□□ -1.75
SOX9-AS1-212ENST00000533232 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
SOX9-AS1-212ENST00000533232 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
SOX9-AS1-212ENST00000533232 PKHD1P08F94 4074 aa4.1□□□□□ -1.75
SOX9-AS1-212ENST00000533232 H0YAA0 97 aa4.09□□□□□ -1.75
SOX9-AS1-212ENST00000533232 Q5VSD8 79 aa4.09□□□□□ -1.75
SOX9-AS1-212ENST00000533232 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
SOX9-AS1-212ENST00000533232 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
SOX9-AS1-212ENST00000533232 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
SOX9-AS1-212ENST00000533232 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
SOX9-AS1-212ENST00000533232 FAT1Q14517 4588 aa4.05□□□□□ -1.76
SOX9-AS1-212ENST00000533232 FLG2Q5D862 2391 aaPredicted RBP4.05□□□□□ -1.76
SOX9-AS1-212ENST00000533232 S4R3F8 94 aa4.04□□□□□ -1.76
SOX9-AS1-212ENST00000533232 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
SOX9-AS1-212ENST00000533232 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
SOX9-AS1-212ENST00000533232 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
SOX9-AS1-212ENST00000533232 RYR2Q92736 4967 aa4□□□□□ -1.77
SOX9-AS1-212ENST00000533232 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
SOX9-AS1-212ENST00000533232 TPRXLQ17RH7 258 aa3.96□□□□□ -1.78
SOX9-AS1-212ENST00000533232 KRTAP25-1Q3LHN0 102 aa3.96□□□□□ -1.78
SOX9-AS1-212ENST00000533232 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
SOX9-AS1-212ENST00000533232 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
SOX9-AS1-212ENST00000533232 TNXBP22105 4242 aa3.94□□□□□ -1.78
SOX9-AS1-212ENST00000533232 ROMO1P60602 79 aa3.94□□□□□ -1.78
SOX9-AS1-212ENST00000533232 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
SOX9-AS1-212ENST00000533232 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.78
SOX9-AS1-212ENST00000533232 HSPG2P98160 4391 aa3.9□□□□□ -1.78
SOX9-AS1-212ENST00000533232 LRP1Q07954 4544 aaKnown RBP3.89□□□□□ -1.79
SOX9-AS1-212ENST00000533232 M0QZ58 72 aa3.89□□□□□ -1.79
SOX9-AS1-212ENST00000533232 KMT2CQ8NEZ4 4911 aaKnown RBP3.88□□□□□ -1.79
SOX9-AS1-212ENST00000533232 A0A0D9SG42 100 aa3.88□□□□□ -1.79
SOX9-AS1-212ENST00000533232 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
SOX9-AS1-212ENST00000533232 RYR1P21817 5038 aa3.87□□□□□ -1.79
SOX9-AS1-212ENST00000533232 DMBT1Q9UGM3 2413 aaPredicted RBP3.87□□□□□ -1.79
SOX9-AS1-212ENST00000533232 P0C880 135 aa3.87□□□□□ -1.79
SOX9-AS1-212ENST00000533232 SEC61BP60468 96 aaKnown RBP3.85□□□□□ -1.79
SOX9-AS1-212ENST00000533232 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
SOX9-AS1-212ENST00000533232 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SOX9-AS1-212ENST00000533232 CRIPTQ9P021 101 aa3.81□□□□□ -1.8
SOX9-AS1-212ENST00000533232 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
SOX9-AS1-212ENST00000533232 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
SOX9-AS1-212ENST00000533232 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
SOX9-AS1-212ENST00000533232 RYR3Q15413 4870 aa3.76□□□□□ -1.81
SOX9-AS1-212ENST00000533232 KIAA1109Q2LD37 5005 aa3.75□□□□□ -1.81
SOX9-AS1-212ENST00000533232 R4GN34 69 aa3.75□□□□□ -1.81
SOX9-AS1-212ENST00000533232 MYCBP2O75592 4640 aa3.73□□□□□ -1.81
SOX9-AS1-212ENST00000533232 LRP2P98164 4655 aa3.69□□□□□ -1.82
SOX9-AS1-212ENST00000533232 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
SOX9-AS1-212ENST00000533232 LPAP08519 4548 aa3.66□□□□□ -1.82
SOX9-AS1-212ENST00000533232 EPPK1P58107 5090 aaKnown RBP3.62□□□□□ -1.83
SOX9-AS1-212ENST00000533232 MUC17Q685J3 4493 aa3.61□□□□□ -1.83
SOX9-AS1-212ENST00000533232 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
SOX9-AS1-212ENST00000533232 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.84
SOX9-AS1-212ENST00000533232 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
SOX9-AS1-212ENST00000533232 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
SOX9-AS1-212ENST00000533232 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
SOX9-AS1-212ENST00000533232 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
SOX9-AS1-212ENST00000533232 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
SOX9-AS1-212ENST00000533232 HERC2O95714 4834 aa3.46□□□□□ -1.85
SOX9-AS1-212ENST00000533232 TNP1P09430 55 aa3.45□□□□□ -1.86
SOX9-AS1-212ENST00000533232 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
SOX9-AS1-212ENST00000533232 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
SOX9-AS1-212ENST00000533232 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
SOX9-AS1-212ENST00000533232 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
SOX9-AS1-212ENST00000533232 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
SOX9-AS1-212ENST00000533232 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
SOX9-AS1-212ENST00000533232 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
SOX9-AS1-212ENST00000533232 HERC1Q15751 4861 aa3.38□□□□□ -1.87
SOX9-AS1-212ENST00000533232 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
SOX9-AS1-212ENST00000533232 M0R2T5 61 aa3.37□□□□□ -1.87
SOX9-AS1-212ENST00000533232 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
SOX9-AS1-212ENST00000533232 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
SOX9-AS1-212ENST00000533232 MT1HP80294 61 aa3.3□□□□□ -1.88
SOX9-AS1-212ENST00000533232 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms