RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 C7orf65Q6ZTY9 151 aa3.34□□□□□ -1.87
NXF1-212ENST00000531872 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
NXF1-212ENST00000531872 TMEM254Q8TBM7 123 aa3.34□□□□□ -1.87
NXF1-212ENST00000531872 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
NXF1-212ENST00000531872 MMP24-AS1A0A0U1RRL7 71 aa3.33□□□□□ -1.88
NXF1-212ENST00000531872 C4orf26Q17RF5 130 aa3.33□□□□□ -1.88
NXF1-212ENST00000531872 PRR15Q8IV56 129 aa3.33□□□□□ -1.88
NXF1-212ENST00000531872 SPCS1Q9Y6A9 102 aa3.33□□□□□ -1.88
NXF1-212ENST00000531872 CEND1Q8N111 149 aa3.32□□□□□ -1.88
NXF1-212ENST00000531872 C9JAW5 83 aa3.31□□□□□ -1.88
NXF1-212ENST00000531872 SEC61GP60059 68 aa3.31□□□□□ -1.88
NXF1-212ENST00000531872 Q5W150 140 aa3.31□□□□□ -1.88
NXF1-212ENST00000531872 S4R3F8 94 aa3.31□□□□□ -1.88
NXF1-212ENST00000531872 MT-ATP8P03928 68 aa3.3□□□□□ -1.88
NXF1-212ENST00000531872 FXYD2P54710 66 aa3.3□□□□□ -1.88
NXF1-212ENST00000531872 LCA10Q71F78 164 aa3.3□□□□□ -1.88
NXF1-212ENST00000531872 A0A1B0GW54 56 aa3.29□□□□□ -1.88
NXF1-212ENST00000531872 hDV103S1A0JD37 113 aa3.29□□□□□ -1.88
NXF1-212ENST00000531872 NDUFS5O43920 106 aa3.29□□□□□ -1.88
NXF1-212ENST00000531872 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
NXF1-212ENST00000531872 CRIPTQ9P021 101 aa3.29□□□□□ -1.88
NXF1-212ENST00000531872 PRO0461Q9UI25 63 aa3.29□□□□□ -1.88
NXF1-212ENST00000531872 CCDC179H3BU77 68 aa3.28□□□□□ -1.88
NXF1-212ENST00000531872 COX6CP09669 75 aa3.28□□□□□ -1.88
NXF1-212ENST00000531872 PSMB2P49721 201 aa3.28□□□□□ -1.88
NXF1-212ENST00000531872 MT1XP80297 61 aa3.28□□□□□ -1.88
NXF1-212ENST00000531872 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
NXF1-212ENST00000531872 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
NXF1-212ENST00000531872 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
NXF1-212ENST00000531872 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
NXF1-212ENST00000531872 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
NXF1-212ENST00000531872 ETDBQ3ZM63 59 aa3.26□□□□□ -1.89
NXF1-212ENST00000531872 V9GYY9 64 aa3.25□□□□□ -1.89
NXF1-212ENST00000531872 K7EQZ3 153 aa3.24□□□□□ -1.89
NXF1-212ENST00000531872 K7ERJ3 54 aa3.24□□□□□ -1.89
NXF1-212ENST00000531872 BAALC-AS2P0C853 105 aa3.24□□□□□ -1.89
NXF1-212ENST00000531872 LOC110117498A0A087WWA1 95 aa3.23□□□□□ -1.89
NXF1-212ENST00000531872 NREPQ16612 68 aa3.23□□□□□ -1.89
NXF1-212ENST00000531872 C1orf64Q8NEQ6 169 aa3.23□□□□□ -1.89
NXF1-212ENST00000531872 UQCRQO14949 82 aa3.22□□□□□ -1.89
NXF1-212ENST00000531872 NAA38Q9BRA0 125 aaKnown RBP3.22□□□□□ -1.89
NXF1-212ENST00000531872 FAM240AA0A1B0GVK7 77 aa3.21□□□□□ -1.9
NXF1-212ENST00000531872 JMJD7-PLA2G4BH0Y9G9 81 aa3.21□□□□□ -1.9
NXF1-212ENST00000531872 PDE6GP18545 87 aa3.21□□□□□ -1.9
NXF1-212ENST00000531872 TMEM258P61165 79 aa3.21□□□□□ -1.9
NXF1-212ENST00000531872 HCG22E2RYF7 251 aa3.2□□□□□ -1.9
NXF1-212ENST00000531872 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
NXF1-212ENST00000531872 SCGB1C2P0DMR2 95 aa3.19□□□□□ -1.9
NXF1-212ENST00000531872 CXCL6P80162 114 aa3.18□□□□□ -1.9
NXF1-212ENST00000531872 C14orf132Q9NPU4 83 aa3.17□□□□□ -1.9
NXF1-212ENST00000531872 COX7CP15954 63 aa3.16□□□□□ -1.9
NXF1-212ENST00000531872 CASC2Q6XLA1 102 aa3.16□□□□□ -1.9
NXF1-212ENST00000531872 A8MUN3 132 aa3.15□□□□□ -1.91
NXF1-212ENST00000531872 H0YAA0 97 aa3.15□□□□□ -1.91
NXF1-212ENST00000531872 PLAC4Q8WY50 150 aa3.15□□□□□ -1.91
NXF1-212ENST00000531872 HIST1H4AP62805 103 aaKnown RBP3.14□□□□□ -1.91
NXF1-212ENST00000531872 A0A087WVE0 104 aa3.13□□□□□ -1.91
NXF1-212ENST00000531872 BPY2O14599 106 aa3.13□□□□□ -1.91
NXF1-212ENST00000531872 ACYP1P07311 99 aa3.13□□□□□ -1.91
NXF1-212ENST00000531872 ATXN8Q156A1 80 aa3.13□□□□□ -1.91
NXF1-212ENST00000531872 ATOX1O00244 68 aa3.12□□□□□ -1.91
NXF1-212ENST00000531872 Q8N9L7 120 aa3.12□□□□□ -1.91
NXF1-212ENST00000531872 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
NXF1-212ENST00000531872 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
NXF1-212ENST00000531872 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
NXF1-212ENST00000531872 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
NXF1-212ENST00000531872 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
NXF1-212ENST00000531872 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
NXF1-212ENST00000531872 SMIM26A0A096LP01 95 aa3.09□□□□□ -1.91
NXF1-212ENST00000531872 H3BT86 120 aa3.09□□□□□ -1.91
NXF1-212ENST00000531872 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
NXF1-212ENST00000531872 SERP2Q8N6R1 65 aa3.08□□□□□ -1.92
NXF1-212ENST00000531872 ADM2Q7Z4H4 148 aa3.07□□□□□ -1.92
NXF1-212ENST00000531872 NDUFC1O43677 76 aa3.05□□□□□ -1.92
NXF1-212ENST00000531872 ATP5EP56381 51 aaPredicted RBP3.05□□□□□ -1.92
NXF1-212ENST00000531872 CYP4F30PQ9H0H9 118 aa3.03□□□□□ -1.92
NXF1-212ENST00000531872 CYSTM1Q9H1C7 97 aa3.03□□□□□ -1.92
NXF1-212ENST00000531872 TP53AIP1Q9HCN2 124 aa3.03□□□□□ -1.92
NXF1-212ENST00000531872 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
NXF1-212ENST00000531872 R4GN34 69 aa3.02□□□□□ -1.93
NXF1-212ENST00000531872 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
NXF1-212ENST00000531872 H7BZZ5 65 aa2.99□□□□□ -1.93
NXF1-212ENST00000531872 M0QZ58 72 aa2.98□□□□□ -1.93
NXF1-212ENST00000531872 ATP5EP2Q5VTU8 51 aa2.98□□□□□ -1.93
NXF1-212ENST00000531872 P0C880 135 aa2.97□□□□□ -1.93
NXF1-212ENST00000531872 MT4P47944 62 aa2.97□□□□□ -1.93
NXF1-212ENST00000531872 LOC101927531A0A1B0GV80 90 aa2.96□□□□□ -1.94
NXF1-212ENST00000531872 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
NXF1-212ENST00000531872 TRAV7A0A075B6U4 112 aa2.95□□□□□ -1.94
NXF1-212ENST00000531872 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
NXF1-212ENST00000531872 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
NXF1-212ENST00000531872 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
NXF1-212ENST00000531872 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
NXF1-212ENST00000531872 C20orf197Q8N268 126 aa2.94□□□□□ -1.94
NXF1-212ENST00000531872 TRAV22A0A0B4J277 110 aa2.93□□□□□ -1.94
NXF1-212ENST00000531872 Q1T7F1 81 aa2.93□□□□□ -1.94
NXF1-212ENST00000531872 UBL5Q9BZL1 73 aa2.93□□□□□ -1.94
NXF1-212ENST00000531872 MT1EP04732 61 aa2.92□□□□□ -1.94
NXF1-212ENST00000531872 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
NXF1-212ENST00000531872 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms