RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	VAMP8	Q9BV40	100 aa		2.75	□□□□□ -1.97
PUM1-222	ENST00000531867	SPRR1B	P22528	89 aa		2.73	□□□□□ -1.97
PUM1-222	ENST00000531867	RBM3	P98179	157 aa	Known RBP	2.73	□□□□□ -1.97
PUM1-222	ENST00000531867	ADIRF	Q15847	76 aa		2.73	□□□□□ -1.97
PUM1-222	ENST00000531867	S100A7L2	Q5SY68	101 aa		2.73	□□□□□ -1.97
PUM1-222	ENST00000531867		Q6ZRX8	168 aa		2.73	□□□□□ -1.97
PUM1-222	ENST00000531867	TRBV10-3	A0A0K0K1G6	114 aa		2.72	□□□□□ -1.97
PUM1-222	ENST00000531867	KRTAP5-2	Q701N4	177 aa		2.72	□□□□□ -1.97
PUM1-222	ENST00000531867	PEA15	Q15121	130 aa		2.71	□□□□□ -1.98
PUM1-222	ENST00000531867	ZNF625	Q96I27	306 aa	Predicted RBP	2.71	□□□□□ -1.98
PUM1-222	ENST00000531867	KMT2D	O14686	5537 aa		2.71	□□□□□ -1.98
PUM1-222	ENST00000531867	SFTA2	Q6UW10	78 aa		2.7	□□□□□ -1.98
PUM1-222	ENST00000531867	NCR3	O14931	201 aa		2.69	□□□□□ -1.98
PUM1-222	ENST00000531867	IGLC3	P0DOY3	106 aa		2.69	□□□□□ -1.98
PUM1-222	ENST00000531867	DMAC1	Q96GE9	116 aa		2.69	□□□□□ -1.98
PUM1-222	ENST00000531867	MDN1	Q9NU22	5596 aa		2.68	□□□□□ -1.98
PUM1-222	ENST00000531867	IGKC	P01834	107 aa		2.68	□□□□□ -1.98
PUM1-222	ENST00000531867	MT-ATP8	P03928	68 aa		2.68	□□□□□ -1.98
PUM1-222	ENST00000531867	LINC00158	P58513	81 aa		2.68	□□□□□ -1.98
PUM1-222	ENST00000531867	KRTDAP	P60985	99 aa		2.68	□□□□□ -1.98
PUM1-222	ENST00000531867	SPTSSB	Q8NFR3	76 aa		2.68	□□□□□ -1.98
PUM1-222	ENST00000531867	LCE3D	Q9BYE3	92 aa		2.68	□□□□□ -1.98
PUM1-222	ENST00000531867	NXT2	Q9NPJ8	142 aa	Known RBP	2.68	□□□□□ -1.98
PUM1-222	ENST00000531867	LINC01546	A6NGU7	62 aa		2.67	□□□□□ -1.98
PUM1-222	ENST00000531867	LINC01549	A6NIU2	74 aa		2.67	□□□□□ -1.98
PUM1-222	ENST00000531867	CYP4F30P	Q9H0H9	118 aa		2.67	□□□□□ -1.98
PUM1-222	ENST00000531867	TRAV13-2	A0A0B4J235	113 aa		2.66	□□□□□ -1.98
PUM1-222	ENST00000531867	APOC3	P02656	99 aa		2.66	□□□□□ -1.98
PUM1-222	ENST00000531867	CCK	P06307	115 aa		2.66	□□□□□ -1.98
PUM1-222	ENST00000531867	CSAG1	Q6PB30	78 aa		2.66	□□□□□ -1.98
PUM1-222	ENST00000531867	PP632	Q6XCG6	107 aa		2.66	□□□□□ -1.98
PUM1-222	ENST00000531867	KRTAP2-1	Q9BYU5	128 aa		2.66	□□□□□ -1.98
PUM1-222	ENST00000531867	PRO1933	Q9H354	126 aa		2.66	□□□□□ -1.98
PUM1-222	ENST00000531867	CDC42SE1	Q9NRR8	79 aa		2.66	□□□□□ -1.98
PUM1-222	ENST00000531867	SMIM13	P0DJ93	91 aa		2.65	□□□□□ -1.99
PUM1-222	ENST00000531867	PYY3	Q5JQD4	70 aa		2.65	□□□□□ -1.99
PUM1-222	ENST00000531867	COA5	Q86WW8	74 aa		2.65	□□□□□ -1.99
PUM1-222	ENST00000531867	HCG22	E2RYF7	251 aa		2.64	□□□□□ -1.99
PUM1-222	ENST00000531867	IFI27L1	Q96BM0	104 aa		2.64	□□□□□ -1.99
PUM1-222	ENST00000531867	OBSCN-AS1	Q96MR7	158 aa		2.64	□□□□□ -1.99
PUM1-222	ENST00000531867	JMJD7-PLA2G4B	H0Y9G9	81 aa		2.63	□□□□□ -1.99
PUM1-222	ENST00000531867	SMCO4	Q9NRQ5	59 aa		2.63	□□□□□ -1.99
PUM1-222	ENST00000531867	TRAV23DV6	A0A075B6W5	121 aa		2.62	□□□□□ -1.99
PUM1-222	ENST00000531867	PMCHL2	Q9BQD1	86 aa		2.62	□□□□□ -1.99
PUM1-222	ENST00000531867	ATOX1	O00244	68 aa		2.61	□□□□□ -1.99
PUM1-222	ENST00000531867	PDE6G	P18545	87 aa		2.61	□□□□□ -1.99
PUM1-222	ENST00000531867	TEX49	A0A1B0GTD5	131 aa		2.6	□□□□□ -1.99
PUM1-222	ENST00000531867	hADV29S1	A0JD25	119 aa		2.6	□□□□□ -1.99
PUM1-222	ENST00000531867		Q96NJ1	140 aa		2.6	□□□□□ -1.99
PUM1-222	ENST00000531867	SNURF	Q9Y675	71 aa		2.6	□□□□□ -1.99
PUM1-222	ENST00000531867	GPR98	Q8WXG9	6306 aa		2.6	□□□□□ -1.99
PUM1-222	ENST00000531867	TMEM170B	Q5T4T1	132 aa		2.59	□□□□□ -1.99
PUM1-222	ENST00000531867	IGLV5-48	A0A075B6I7	105 aa		2.58	□□□□□ -2
PUM1-222	ENST00000531867	INE1	O15225	51 aa		2.58	□□□□□ -2
PUM1-222	ENST00000531867	NDUFC1	O43677	76 aa		2.58	□□□□□ -2
PUM1-222	ENST00000531867	BAGE3	Q86Y29	109 aa		2.58	□□□□□ -2
PUM1-222	ENST00000531867	DNAL4	O96015	105 aa		2.57	□□□□□ -2
PUM1-222	ENST00000531867	SPATA45	Q537H7	98 aa		2.57	□□□□□ -2
PUM1-222	ENST00000531867	MYMX	A0A1B0GTQ4	84 aa		2.56	□□□□□ -2
PUM1-222	ENST00000531867	MT1B	P07438	61 aa		2.56	□□□□□ -2
PUM1-222	ENST00000531867	SPRR2E	P22531	72 aa		2.56	□□□□□ -2
PUM1-222	ENST00000531867	SPRR2B	P35325	72 aa		2.56	□□□□□ -2
PUM1-222	ENST00000531867	SPRR2A	P35326	72 aa		2.56	□□□□□ -2
PUM1-222	ENST00000531867	ELOF1	P60002	83 aa	Known RBP	2.56	□□□□□ -2
PUM1-222	ENST00000531867	PMCHL1	Q16048	86 aa		2.56	□□□□□ -2
PUM1-222	ENST00000531867	DEFB105A	Q8NG35	78 aa		2.56	□□□□□ -2
PUM1-222	ENST00000531867	TRBV7-7	A0A0K0K1E9	115 aa		2.55	□□□□□ -2
PUM1-222	ENST00000531867		K7EP34	96 aa		2.54	□□□□□ -2
PUM1-222	ENST00000531867	SERP2	Q8N6R1	65 aa		2.54	□□□□□ -2
PUM1-222	ENST00000531867	C18orf32	Q8TCD1	76 aa		2.54	□□□□□ -2
PUM1-222	ENST00000531867	SPRR5	A0A1B0GTR4	108 aa		2.53	□□□□□ -2
PUM1-222	ENST00000531867	COX7B	P24311	80 aa		2.53	□□□□□ -2
PUM1-222	ENST00000531867	LOC110117498	A0A087WWA1	95 aa		2.52	□□□□□ -2.01
PUM1-222	ENST00000531867	IGKV4-1	P06312	121 aa		2.52	□□□□□ -2.01
PUM1-222	ENST00000531867	SPRR2F	Q96RM1	72 aa		2.52	□□□□□ -2.01
PUM1-222	ENST00000531867	UQCR10	Q9UDW1	63 aa		2.52	□□□□□ -2.01
PUM1-222	ENST00000531867	KRTAP19-8	Q3LI54	63 aa		2.51	□□□□□ -2.01
PUM1-222	ENST00000531867		Q6JHZ5	121 aa		2.51	□□□□□ -2.01
PUM1-222	ENST00000531867	C20orf197	Q8N268	126 aa		2.51	□□□□□ -2.01
PUM1-222	ENST00000531867	PRO1854	Q9UHT4	67 aa		2.51	□□□□□ -2.01
PUM1-222	ENST00000531867	LOC101927531	A0A1B0GV80	90 aa		2.5	□□□□□ -2.01
PUM1-222	ENST00000531867	COX6C	P09669	75 aa		2.5	□□□□□ -2.01
PUM1-222	ENST00000531867	ZNF815P	A8K554	130 aa		2.48	□□□□□ -2.01
PUM1-222	ENST00000531867	CHKB-CPT1B	H3BT56	60 aa		2.48	□□□□□ -2.01
PUM1-222	ENST00000531867	LEPROTL1	O95214	131 aa		2.48	□□□□□ -2.01
PUM1-222	ENST00000531867	SPRR2D	P22532	72 aa		2.48	□□□□□ -2.01
PUM1-222	ENST00000531867	PLN	P26678	52 aa		2.48	□□□□□ -2.01
PUM1-222	ENST00000531867		Q5VV11	94 aa		2.48	□□□□□ -2.01
PUM1-222	ENST00000531867	C3orf79	P0CE67	100 aa		2.47	□□□□□ -2.01
PUM1-222	ENST00000531867	LINC00308	Q8TCZ7	52 aa		2.47	□□□□□ -2.01
PUM1-222	ENST00000531867		F8WEM9	126 aa		2.46	□□□□□ -2.02
PUM1-222	ENST00000531867	SYS1-DBNDD2	H3BUS1	97 aa		2.46	□□□□□ -2.02
PUM1-222	ENST00000531867	SPRR2G	Q9BYE4	73 aa		2.46	□□□□□ -2.02
PUM1-222	ENST00000531867	TRAV22	A0A0B4J277	110 aa		2.45	□□□□□ -2.02
PUM1-222	ENST00000531867	SPINK7	P58062	85 aa		2.44	□□□□□ -2.02
PUM1-222	ENST00000531867	CYSTM1	Q9H1C7	97 aa		2.44	□□□□□ -2.02
PUM1-222	ENST00000531867	IGKV3D-7	A0A0C4DH55	119 aa		2.43	□□□□□ -2.02
PUM1-222	ENST00000531867	KRTAP13-4	Q3LI77	160 aa		2.42	□□□□□ -2.02
PUM1-222	ENST00000531867		H7BZZ5	65 aa		2.41	□□□□□ -2.02
PUM1-222	ENST00000531867	KLKP1	Q107X0	134 aa		2.4	□□□□□ -2.03

Retrieved 100 of 20,778 RNA–protein pairs in 871.1 ms