RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 HMGA1P17096 107 aaKnown RBP-1.63□□□□□ -2.67
RC3H1-206ENST00000531594 Q9H521 79 aa-1.63□□□□□ -2.67
RC3H1-206ENST00000531594 KANTRA0A1W2PQU2 76 aa-1.64□□□□□ -2.67
RC3H1-206ENST00000531594 SMIM13P0DJ93 91 aa-1.64□□□□□ -2.67
RC3H1-206ENST00000531594 PKIAP61925 76 aa-1.64□□□□□ -2.67
RC3H1-206ENST00000531594 NCBP2-AS2Q69YL0 99 aa-1.64□□□□□ -2.67
RC3H1-206ENST00000531594 KCNQ1DNQ9H478 68 aa-1.64□□□□□ -2.67
RC3H1-206ENST00000531594 C6orf48Q9UBA6 75 aa-1.64□□□□□ -2.67
RC3H1-206ENST00000531594 ITSN1Q15811 1721 aa-1.64□□□□□ -2.67
RC3H1-206ENST00000531594 DNAH14Q0VDD8 3507 aa-1.65□□□□□ -2.67
RC3H1-206ENST00000531594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.65□□□□□ -2.67
RC3H1-206ENST00000531594 ATP5EP2Q5VTU8 51 aa-1.65□□□□□ -2.67
RC3H1-206ENST00000531594 ARHGAP35Q9NRY4 1499 aa-1.65□□□□□ -2.67
RC3H1-206ENST00000531594 PREX2Q70Z35 1606 aa-1.66□□□□□ -2.68
RC3H1-206ENST00000531594 HFM1A2PYH4 1435 aa-1.66□□□□□ -2.68
RC3H1-206ENST00000531594 LOC400499M0QZD8 3231 aa-1.66□□□□□ -2.68
RC3H1-206ENST00000531594 UNC80Q8N2C7 3258 aa-1.67□□□□□ -2.68
RC3H1-206ENST00000531594 CFAP47Q6ZTR5 3102 aa-1.67□□□□□ -2.68
RC3H1-206ENST00000531594 MAP3K4Q9Y6R4 1608 aa-1.67□□□□□ -2.68
RC3H1-206ENST00000531594 KIF14Q15058 1648 aa-1.68□□□□□ -2.68
RC3H1-206ENST00000531594 ETDCA0A1B0GVM5 59 aa-1.68□□□□□ -2.68
RC3H1-206ENST00000531594 CLASP1Q7Z460 1538 aa-1.68□□□□□ -2.68
RC3H1-206ENST00000531594 RICTORQ6R327 1708 aa-1.69□□□□□ -2.68
RC3H1-206ENST00000531594 S100A8P05109 93 aa-1.69□□□□□ -2.68
RC3H1-206ENST00000531594 ENHOQ6UWT2 76 aa-1.69□□□□□ -2.68
RC3H1-206ENST00000531594 RALGAPBQ86X10 1494 aa-1.69□□□□□ -2.68
RC3H1-206ENST00000531594 PPLO60437 1756 aa-1.7□□□□□ -2.68
RC3H1-206ENST00000531594 TJP1Q07157 1748 aa-1.7□□□□□ -2.68
RC3H1-206ENST00000531594 NRAPQ86VF7 1730 aa-1.7□□□□□ -2.68
RC3H1-206ENST00000531594 INO80Q9ULG1 1556 aaPredicted RBP-1.7□□□□□ -2.68
RC3H1-206ENST00000531594 USP34Q70CQ2 3546 aa-1.71□□□□□ -2.68
RC3H1-206ENST00000531594 TDRG1Q3Y452 100 aa-1.71□□□□□ -2.68
RC3H1-206ENST00000531594 DEFB121Q5J5C9 76 aa-1.71□□□□□ -2.68
RC3H1-206ENST00000531594 ABRACLQ9P1F3 81 aa-1.71□□□□□ -2.68
RC3H1-206ENST00000531594 V9GYS6 101 aa-1.71□□□□□ -2.68
RC3H1-206ENST00000531594 VCANP13611 3396 aa-1.71□□□□□ -2.68
RC3H1-206ENST00000531594 ANKRD26Q9UPS8 1709 aa-1.71□□□□□ -2.68
RC3H1-206ENST00000531594 UACAQ9BZF9 1416 aa-1.72□□□□□ -2.68
RC3H1-206ENST00000531594 KRTAP19-2Q3LHN2 52 aa-1.73□□□□□ -2.69
RC3H1-206ENST00000531594 RNF17Q9BXT8 1623 aaKnown RBP-1.73□□□□□ -2.69
RC3H1-206ENST00000531594 FAM208AQ9UK61 1670 aaKnown RBP-1.74□□□□□ -2.69
RC3H1-206ENST00000531594 KAAG1Q9UBP8 84 aa-1.74□□□□□ -2.69
RC3H1-206ENST00000531594 VPS8Q8N3P4 1428 aa-1.74□□□□□ -2.69
RC3H1-206ENST00000531594 POLR2KP53803 58 aaKnown RBP-1.75□□□□□ -2.69
RC3H1-206ENST00000531594 CFAP43Q8NDM7 1665 aa-1.75□□□□□ -2.69
RC3H1-206ENST00000531594 DNAH12Q6ZR08 3092 aa-1.75□□□□□ -2.69
RC3H1-206ENST00000531594 KDM5DQ9BY66 1539 aa-1.76□□□□□ -2.69
RC3H1-206ENST00000531594 NRXN3Q9Y4C0 1643 aa-1.76□□□□□ -2.69
RC3H1-206ENST00000531594 MYO5CQ9NQX4 1742 aa-1.76□□□□□ -2.69
RC3H1-206ENST00000531594 H3BUT2 72 aa-1.76□□□□□ -2.69
RC3H1-206ENST00000531594 ADIRFQ15847 76 aa-1.76□□□□□ -2.69
RC3H1-206ENST00000531594 ST20Q9HBF5 79 aa-1.76□□□□□ -2.69
RC3H1-206ENST00000531594 AKAP12Q02952 1782 aa-1.77□□□□□ -2.69
RC3H1-206ENST00000531594 H3BVH4 76 aa-1.77□□□□□ -2.69
RC3H1-206ENST00000531594 RRBP1Q9P2E9 1410 aaKnown RBP-1.77□□□□□ -2.69
RC3H1-206ENST00000531594 TTC37Q6PGP7 1564 aa-1.77□□□□□ -2.69
RC3H1-206ENST00000531594 CENPFP49454 3210 aa-1.78□□□□□ -2.69
RC3H1-206ENST00000531594 ABCC3O15438 1527 aa-1.78□□□□□ -2.69
RC3H1-206ENST00000531594 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.79□□□□□ -2.7
RC3H1-206ENST00000531594 SMIM27A0A1W2PRY6 76 aa-1.79□□□□□ -2.7
RC3H1-206ENST00000531594 ASPMQ8IZT6 3477 aa-1.79□□□□□ -2.7
RC3H1-206ENST00000531594 C3P01024 1663 aa-1.8□□□□□ -2.7
RC3H1-206ENST00000531594 NHSQ6T4R5 1651 aa-1.8□□□□□ -2.7
RC3H1-206ENST00000531594 DIP2AQ14689 1571 aa-1.81□□□□□ -2.7
RC3H1-206ENST00000531594 ABCC6O95255 1503 aa-1.81□□□□□ -2.7
RC3H1-206ENST00000531594 CD52P31358 61 aa-1.81□□□□□ -2.7
RC3H1-206ENST00000531594 GLI2P10070 1586 aa-1.81□□□□□ -2.7
RC3H1-206ENST00000531594 WFDC10BQ8IUB3 73 aa-1.82□□□□□ -2.7
RC3H1-206ENST00000531594 MROH1Q8NDA8 1641 aa-1.82□□□□□ -2.7
RC3H1-206ENST00000531594 LMTK2Q8IWU2 1503 aa-1.82□□□□□ -2.7
RC3H1-206ENST00000531594 DEFB131AP59861 70 aa-1.83□□□□□ -2.7
RC3H1-206ENST00000531594 DEFB133Q30KQ1 61 aa-1.83□□□□□ -2.7
RC3H1-206ENST00000531594 DEFB114Q30KQ6 69 aa-1.83□□□□□ -2.7
RC3H1-206ENST00000531594 S100A13Q99584 98 aa-1.83□□□□□ -2.7
RC3H1-206ENST00000531594 CCDC180Q9P1Z9 1646 aa-1.84□□□□□ -2.7
RC3H1-206ENST00000531594 TIAM1Q13009 1591 aa-1.85□□□□□ -2.7
RC3H1-206ENST00000531594 LMO7Q8WWI1 1683 aa-1.85□□□□□ -2.71
RC3H1-206ENST00000531594 XIRP2A4UGR9 3374 aa-1.85□□□□□ -2.71
RC3H1-206ENST00000531594 MADDQ8WXG6 1647 aa-1.85□□□□□ -2.71
RC3H1-206ENST00000531594 CDH23Q9H251 3354 aa-1.85□□□□□ -2.71
RC3H1-206ENST00000531594 NMES1Q9C002 83 aa-1.86□□□□□ -2.71
RC3H1-206ENST00000531594 C18orf32Q8TCD1 76 aa-1.87□□□□□ -2.71
RC3H1-206ENST00000531594 BRCA2P51587 3418 aa-1.87□□□□□ -2.71
RC3H1-206ENST00000531594 SCRIBQ14160 1630 aa-1.88□□□□□ -2.71
RC3H1-206ENST00000531594 TMEM167BQ9NRX6 74 aa-1.88□□□□□ -2.71
RC3H1-206ENST00000531594 ABCC1P33527 1531 aa-1.88□□□□□ -2.71
RC3H1-206ENST00000531594 MROH2AA6NES4 1674 aa-1.89□□□□□ -2.71
RC3H1-206ENST00000531594 ANKARQ7Z5J8 1434 aa-1.89□□□□□ -2.71
RC3H1-206ENST00000531594 ATXN8Q156A1 80 aa-1.89□□□□□ -2.71
RC3H1-206ENST00000531594 RHPN1-AS1Q9BWJ2 59 aa-1.89□□□□□ -2.71
RC3H1-206ENST00000531594 VPS13AQ96RL7 3174 aa-1.89□□□□□ -2.71
RC3H1-206ENST00000531594 LINC00308Q8TCZ7 52 aa-1.9□□□□□ -2.71
RC3H1-206ENST00000531594 HTN1P15515 57 aa-1.91□□□□□ -2.72
RC3H1-206ENST00000531594 K7EMI3 77 aa-1.92□□□□□ -2.72
RC3H1-206ENST00000531594 PEG3Q9GZU2 1588 aa-1.93□□□□□ -2.72
RC3H1-206ENST00000531594 GNG13Q9P2W3 67 aa-1.93□□□□□ -2.72
RC3H1-206ENST00000531594 HILPDAQ9Y5L2 63 aa-1.93□□□□□ -2.72
RC3H1-206ENST00000531594 SMIM2Q9BVW6 85 aa-1.94□□□□□ -2.72
RC3H1-206ENST00000531594 ALS2Q96Q42 1657 aa-1.94□□□□□ -2.72
RC3H1-206ENST00000531594 DCAF1Q9Y4B6 1507 aa-1.95□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms