RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ACYP2P14621 99 aa1.44□□□□□ -2.18
CASP4-208ENST00000530309 LINC01556Q5JQF7 62 aa1.44□□□□□ -2.18
CASP4-208ENST00000530309 ZNF462Q96JM2 2506 aa1.43□□□□□ -2.18
CASP4-208ENST00000530309 MRPL34Q9BQ48 92 aaKnown RBP1.43□□□□□ -2.18
CASP4-208ENST00000530309 LRRK2Q5S007 2527 aa1.43□□□□□ -2.18
CASP4-208ENST00000530309 PIEZO1Q92508 2521 aa1.43□□□□□ -2.18
CASP4-208ENST00000530309 PRKDCP78527 4128 aaKnown RBP1.43□□□□□ -2.18
CASP4-208ENST00000530309 DNAH9Q9NYC9 4486 aa1.43□□□□□ -2.18
CASP4-208ENST00000530309 ABCA12Q86UK0 2595 aa1.43□□□□□ -2.18
CASP4-208ENST00000530309 ANK2Q01484 3957 aa1.42□□□□□ -2.18
CASP4-208ENST00000530309 CENPEQ02224 2701 aa1.42□□□□□ -2.18
CASP4-208ENST00000530309 ACACBO00763 2458 aa1.42□□□□□ -2.18
CASP4-208ENST00000530309 A0A087WTM6 91 aa1.42□□□□□ -2.18
CASP4-208ENST00000530309 H0YAA0 97 aa1.42□□□□□ -2.18
CASP4-208ENST00000530309 ACANP16112 2415 aa1.42□□□□□ -2.18
CASP4-208ENST00000530309 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
CASP4-208ENST00000530309 FRAS1Q86XX4 4008 aa1.41□□□□□ -2.18
CASP4-208ENST00000530309 PLECQ15149 4684 aaKnown RBP1.41□□□□□ -2.18
CASP4-208ENST00000530309 A0A1B0GU69 56 aa1.41□□□□□ -2.18
CASP4-208ENST00000530309 LY6G6CO95867 125 aa1.41□□□□□ -2.18
CASP4-208ENST00000530309 CACNA1AO00555 2505 aa1.41□□□□□ -2.18
CASP4-208ENST00000530309 TENM3Q9P273 2699 aa1.41□□□□□ -2.18
CASP4-208ENST00000530309 CSMD2Q7Z408 3487 aa1.4□□□□□ -2.19
CASP4-208ENST00000530309 DNAH7Q8WXX0 4024 aa1.4□□□□□ -2.19
CASP4-208ENST00000530309 PKD1L1Q8TDX9 2849 aa1.4□□□□□ -2.19
CASP4-208ENST00000530309 PKHD1L1Q86WI1 4243 aa1.4□□□□□ -2.19
CASP4-208ENST00000530309 CUBNO60494 3623 aa1.4□□□□□ -2.19
CASP4-208ENST00000530309 UBR5O95071 2799 aaPredicted RBP1.39□□□□□ -2.19
CASP4-208ENST00000530309 NOTCH1P46531 2555 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 MYO18BQ8IUG5 2567 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 LRP1BQ9NZR2 4599 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 PDZD2O15018 2839 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 NUPR2A6NF83 97 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 SPART-AS1P0CW21 52 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 DEFB113Q30KQ7 82 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 CCL19Q99731 98 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 HECTD1Q9ULT8 2610 aa1.39□□□□□ -2.19
CASP4-208ENST00000530309 ZNF469Q96JG9 3925 aaPredicted RBP1.38□□□□□ -2.19
CASP4-208ENST00000530309 PRLHP81277 87 aa1.38□□□□□ -2.19
CASP4-208ENST00000530309 TENM4Q6N022 2769 aa1.38□□□□□ -2.19
CASP4-208ENST00000530309 FAM208BQ5VWN6 2430 aa1.37□□□□□ -2.19
CASP4-208ENST00000530309 A0A096LNI7 61 aa1.37□□□□□ -2.19
CASP4-208ENST00000530309 MAST4O15021 2626 aa1.37□□□□□ -2.19
CASP4-208ENST00000530309 APOBP04114 4563 aaKnown RBP1.37□□□□□ -2.19
CASP4-208ENST00000530309 DNAH5Q8TE73 4624 aa1.37□□□□□ -2.19
CASP4-208ENST00000530309 NBEAL1Q6ZS30 2694 aa1.36□□□□□ -2.19
CASP4-208ENST00000530309 DEFB4AO15263 64 aa1.36□□□□□ -2.19
CASP4-208ENST00000530309 DEFB135Q30KP9 77 aa1.36□□□□□ -2.19
CASP4-208ENST00000530309 MYCBP2O75592 4640 aa1.36□□□□□ -2.19
CASP4-208ENST00000530309 NSD1Q96L73 2696 aaPredicted RBP1.36□□□□□ -2.19
CASP4-208ENST00000530309 IGSF10Q6WRI0 2623 aa1.36□□□□□ -2.19
CASP4-208ENST00000530309 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
CASP4-208ENST00000530309 MEGF8Q7Z7M0 2845 aa1.35□□□□□ -2.19
CASP4-208ENST00000530309 ITPR2Q14571 2701 aa1.35□□□□□ -2.19
CASP4-208ENST00000530309 COL7A1Q02388 2944 aa1.35□□□□□ -2.19
CASP4-208ENST00000530309 STAB2Q8WWQ8 2551 aa1.35□□□□□ -2.19
CASP4-208ENST00000530309 FLNAP21333 2647 aaKnown RBP1.35□□□□□ -2.19
CASP4-208ENST00000530309 NBDYA0A0U1RRE5 68 aa1.34□□□□□ -2.19
CASP4-208ENST00000530309 INE1O15225 51 aa1.34□□□□□ -2.19
CASP4-208ENST00000530309 COX6B2Q6YFQ2 88 aa1.34□□□□□ -2.19
CASP4-208ENST00000530309 FASNP49327 2511 aaKnown RBP1.34□□□□□ -2.2
CASP4-208ENST00000530309 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
CASP4-208ENST00000530309 FLNBO75369 2602 aaKnown RBP1.33□□□□□ -2.2
CASP4-208ENST00000530309 FAT2Q9NYQ8 4349 aa1.33□□□□□ -2.2
CASP4-208ENST00000530309 CSMD3Q7Z407 3707 aa1.32□□□□□ -2.2
CASP4-208ENST00000530309 DYNC1H1Q14204 4646 aaKnown RBP1.32□□□□□ -2.2
CASP4-208ENST00000530309 ATRQ13535 2644 aa1.32□□□□□ -2.2
CASP4-208ENST00000530309 SSBP3-AS1Q7Z2R9 100 aa1.32□□□□□ -2.2
CASP4-208ENST00000530309 KMT2AQ03164 3969 aa1.32□□□□□ -2.2
CASP4-208ENST00000530309 HSPG2P98160 4391 aa1.32□□□□□ -2.2
CASP4-208ENST00000530309 USP24Q9UPU5 2620 aa1.31□□□□□ -2.2
CASP4-208ENST00000530309 HTN3P15516 51 aa1.31□□□□□ -2.2
CASP4-208ENST00000530309 COL6A5A8TX70 2615 aa1.31□□□□□ -2.2
CASP4-208ENST00000530309 PKHD1P08F94 4074 aa1.3□□□□□ -2.2
CASP4-208ENST00000530309 TGP01266 2768 aa1.3□□□□□ -2.2
CASP4-208ENST00000530309 DEFB123Q8N688 67 aa1.3□□□□□ -2.2
CASP4-208ENST00000530309 TNXBP22105 4242 aa1.29□□□□□ -2.2
CASP4-208ENST00000530309 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
CASP4-208ENST00000530309 CRIPTQ9P021 101 aa1.29□□□□□ -2.2
CASP4-208ENST00000530309 VPS13BQ7Z7G8 4022 aa1.29□□□□□ -2.2
CASP4-208ENST00000530309 STAB1Q9NY15 2570 aa1.29□□□□□ -2.2
CASP4-208ENST00000530309 C10orf95Q9H7T3 257 aa1.28□□□□□ -2.2
CASP4-208ENST00000530309 FAT3Q8TDW7 4589 aa1.27□□□□□ -2.21
CASP4-208ENST00000530309 PKD1P98161 4303 aa1.27□□□□□ -2.21
CASP4-208ENST00000530309 FAT1Q14517 4588 aa1.26□□□□□ -2.21
CASP4-208ENST00000530309 STARD9Q9P2P6 4700 aa1.26□□□□□ -2.21
CASP4-208ENST00000530309 MGAM2Q2M2H8 2515 aa1.26□□□□□ -2.21
CASP4-208ENST00000530309 DMBT1Q9UGM3 2413 aaPredicted RBP1.25□□□□□ -2.21
CASP4-208ENST00000530309 RPS29P62273 56 aaKnown RBP1.25□□□□□ -2.21
CASP4-208ENST00000530309 APLNQ9ULZ1 77 aa1.25□□□□□ -2.21
CASP4-208ENST00000530309 SMR3AQ99954 134 aa1.24□□□□□ -2.21
CASP4-208ENST00000530309 S4R3F8 94 aa1.24□□□□□ -2.21
CASP4-208ENST00000530309 SPINK6Q6UWN8 80 aa1.23□□□□□ -2.21
CASP4-208ENST00000530309 SPINK1P00995 79 aa1.22□□□□□ -2.21
CASP4-208ENST00000530309 PLAC4Q8WY50 150 aa1.21□□□□□ -2.22
CASP4-208ENST00000530309 HERC1Q15751 4861 aa1.2□□□□□ -2.22
CASP4-208ENST00000530309 M0QZ58 72 aa1.18□□□□□ -2.22
CASP4-208ENST00000530309 DNHD1Q96M86 4753 aa1.17□□□□□ -2.22
CASP4-208ENST00000530309 FLGP20930 4061 aaPredicted RBP1.16□□□□□ -2.22
CASP4-208ENST00000530309 A0A0D9SG42 100 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms