RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-222ENST00000529919 HUWE1Q7Z6Z7 4374 aaKnown RBP3.7□□□□□ -1.82
CTNND1-222ENST00000529919 CSMD3Q7Z407 3707 aa3.67□□□□□ -1.82
CTNND1-222ENST00000529919 INE1O15225 51 aa3.63□□□□□ -1.83
CTNND1-222ENST00000529919 DNAH5Q8TE73 4624 aa3.62□□□□□ -1.83
CTNND1-222ENST00000529919 LYSTQ99698 3801 aa3.62□□□□□ -1.83
CTNND1-222ENST00000529919 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
CTNND1-222ENST00000529919 DNAH9Q9NYC9 4486 aa3.61□□□□□ -1.83
CTNND1-222ENST00000529919 PLECQ15149 4684 aaKnown RBP3.6□□□□□ -1.83
CTNND1-222ENST00000529919 DYNC2H1Q8NCM8 4307 aaKnown RBP3.59□□□□□ -1.84
CTNND1-222ENST00000529919 KRTAP3-3Q9BYR6 98 aa3.58□□□□□ -1.84
CTNND1-222ENST00000529919 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
CTNND1-222ENST00000529919 DNAH7Q8WXX0 4024 aa3.54□□□□□ -1.84
CTNND1-222ENST00000529919 RYR1P21817 5038 aa3.54□□□□□ -1.84
CTNND1-222ENST00000529919 DNAH11Q96DT5 4516 aa3.52□□□□□ -1.85
CTNND1-222ENST00000529919 EPPK1P58107 5090 aaKnown RBP3.52□□□□□ -1.85
CTNND1-222ENST00000529919 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
CTNND1-222ENST00000529919 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
CTNND1-222ENST00000529919 SACSQ9NZJ4 4579 aa3.49□□□□□ -1.85
CTNND1-222ENST00000529919 RYR2Q92736 4967 aa3.48□□□□□ -1.85
CTNND1-222ENST00000529919 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
CTNND1-222ENST00000529919 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
CTNND1-222ENST00000529919 FRAS1Q86XX4 4008 aa3.46□□□□□ -1.86
CTNND1-222ENST00000529919 HYDINQ4G0P3 5121 aa3.46□□□□□ -1.86
CTNND1-222ENST00000529919 DYNC1H1Q14204 4646 aaKnown RBP3.45□□□□□ -1.86
CTNND1-222ENST00000529919 FAT1Q14517 4588 aa3.45□□□□□ -1.86
CTNND1-222ENST00000529919 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
CTNND1-222ENST00000529919 KRTAP17-1Q9BYP8 105 aa3.42□□□□□ -1.86
CTNND1-222ENST00000529919 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
CTNND1-222ENST00000529919 LRP1BQ9NZR2 4599 aa3.4□□□□□ -1.86
CTNND1-222ENST00000529919 DNAH10Q8IVF4 4471 aa3.4□□□□□ -1.87
CTNND1-222ENST00000529919 DNAH6Q9C0G6 4158 aa3.4□□□□□ -1.87
CTNND1-222ENST00000529919 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
CTNND1-222ENST00000529919 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
CTNND1-222ENST00000529919 STARD9Q9P2P6 4700 aa3.37□□□□□ -1.87
CTNND1-222ENST00000529919 LORP23490 312 aaPredicted RBP3.37□□□□□ -1.87
CTNND1-222ENST00000529919 HECTD4Q9Y4D8 3996 aa3.37□□□□□ -1.87
CTNND1-222ENST00000529919 KRTAP4-1Q9BYQ7 146 aa3.36□□□□□ -1.87
CTNND1-222ENST00000529919 HERC2O95714 4834 aa3.36□□□□□ -1.87
CTNND1-222ENST00000529919 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
CTNND1-222ENST00000529919 MT1HP80294 61 aa3.34□□□□□ -1.87
CTNND1-222ENST00000529919 DNAH17Q9UFH2 4485 aa3.33□□□□□ -1.88
CTNND1-222ENST00000529919 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
CTNND1-222ENST00000529919 DNAH8Q96JB1 4490 aa3.28□□□□□ -1.88
CTNND1-222ENST00000529919 KMT2AQ03164 3969 aa3.28□□□□□ -1.88
CTNND1-222ENST00000529919 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
CTNND1-222ENST00000529919 FAT2Q9NYQ8 4349 aa3.27□□□□□ -1.89
CTNND1-222ENST00000529919 DNAH2Q9P225 4427 aa3.27□□□□□ -1.89
CTNND1-222ENST00000529919 MT2AP02795 61 aa3.26□□□□□ -1.89
CTNND1-222ENST00000529919 PKHD1P08F94 4074 aa3.25□□□□□ -1.89
CTNND1-222ENST00000529919 PKD1P98161 4303 aa3.24□□□□□ -1.89
CTNND1-222ENST00000529919 VPS13BQ7Z7G8 4022 aa3.23□□□□□ -1.89
CTNND1-222ENST00000529919 MYCBP2O75592 4640 aa3.22□□□□□ -1.89
CTNND1-222ENST00000529919 ABCA13Q86UQ4 5058 aa3.21□□□□□ -1.9
CTNND1-222ENST00000529919 PKHD1L1Q86WI1 4243 aa3.2□□□□□ -1.9
CTNND1-222ENST00000529919 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
CTNND1-222ENST00000529919 MT1FP04733 61 aa3.19□□□□□ -1.9
CTNND1-222ENST00000529919 FAT3Q8TDW7 4589 aa3.18□□□□□ -1.9
CTNND1-222ENST00000529919 LRP1Q07954 4544 aaKnown RBP3.15□□□□□ -1.91
CTNND1-222ENST00000529919 HERC1Q15751 4861 aa3.14□□□□□ -1.91
CTNND1-222ENST00000529919 HSPG2P98160 4391 aa3.13□□□□□ -1.91
CTNND1-222ENST00000529919 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
CTNND1-222ENST00000529919 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
CTNND1-222ENST00000529919 LRP2P98164 4655 aa3.08□□□□□ -1.92
CTNND1-222ENST00000529919 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
CTNND1-222ENST00000529919 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
CTNND1-222ENST00000529919 KRTAP9-2Q9BYQ4 174 aa3.04□□□□□ -1.92
CTNND1-222ENST00000529919 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
CTNND1-222ENST00000529919 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
CTNND1-222ENST00000529919 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
CTNND1-222ENST00000529919 TNXBP22105 4242 aa2.98□□□□□ -1.93
CTNND1-222ENST00000529919 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
CTNND1-222ENST00000529919 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
CTNND1-222ENST00000529919 SPRR2EP22531 72 aa2.96□□□□□ -1.94
CTNND1-222ENST00000529919 SPRR2BP35325 72 aa2.96□□□□□ -1.94
CTNND1-222ENST00000529919 SPRR2AP35326 72 aa2.96□□□□□ -1.94
CTNND1-222ENST00000529919 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.94
CTNND1-222ENST00000529919 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
CTNND1-222ENST00000529919 KRTAP9-8Q9BYQ0 159 aa2.95□□□□□ -1.94
CTNND1-222ENST00000529919 LCE2CQ5TA81 110 aa2.95□□□□□ -1.94
CTNND1-222ENST00000529919 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
CTNND1-222ENST00000529919 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
CTNND1-222ENST00000529919 KRTAP9-3Q9BYQ3 159 aa2.89□□□□□ -1.95
CTNND1-222ENST00000529919 MT1BP07438 61 aa2.87□□□□□ -1.95
CTNND1-222ENST00000529919 SPRR2DP22532 72 aa2.86□□□□□ -1.95
CTNND1-222ENST00000529919 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
CTNND1-222ENST00000529919 LPAP08519 4548 aa2.83□□□□□ -1.96
CTNND1-222ENST00000529919 MT1XP80297 61 aa2.83□□□□□ -1.96
CTNND1-222ENST00000529919 RNF213Q63HN8 5207 aa2.82□□□□□ -1.96
CTNND1-222ENST00000529919 LCE2BO14633 110 aa2.82□□□□□ -1.96
CTNND1-222ENST00000529919 LCE3BQ5TA77 95 aa2.81□□□□□ -1.96
CTNND1-222ENST00000529919 KRTAP9-7A8MTY7 169 aa2.8□□□□□ -1.96
CTNND1-222ENST00000529919 KRTAP19-2Q3LHN2 52 aa2.79□□□□□ -1.96
CTNND1-222ENST00000529919 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
CTNND1-222ENST00000529919 KRTAP4-8Q9BYQ9 185 aa2.79□□□□□ -1.96
CTNND1-222ENST00000529919 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
CTNND1-222ENST00000529919 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
CTNND1-222ENST00000529919 LCE2DQ5TA82 110 aaPredicted RBP2.77□□□□□ -1.97
CTNND1-222ENST00000529919 LCE2AQ5TA79 106 aaPredicted RBP2.76□□□□□ -1.97
CTNND1-222ENST00000529919 MT1GP13640 62 aa2.74□□□□□ -1.97
CTNND1-222ENST00000529919 MUC17Q685J3 4493 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms