RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
VPS11-203ENST00000529545 IGKV3D-7A0A0C4DH55 119 aa4.2□□□□□ -1.74
VPS11-203ENST00000529545 A6NN06 94 aa4.2□□□□□ -1.74
VPS11-203ENST00000529545 H3BQ85 93 aa4.2□□□□□ -1.74
VPS11-203ENST00000529545 DNAL4O96015 105 aa4.19□□□□□ -1.74
VPS11-203ENST00000529545 C5orf47Q569G3 176 aa4.19□□□□□ -1.74
VPS11-203ENST00000529545 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
VPS11-203ENST00000529545 Q6ZQT0 140 aa4.18□□□□□ -1.74
VPS11-203ENST00000529545 DSCR8Q96T75 97 aa4.18□□□□□ -1.74
VPS11-203ENST00000529545 A0A087WVE0 104 aa4.17□□□□□ -1.74
VPS11-203ENST00000529545 NDUFB1O75438 58 aa4.17□□□□□ -1.74
VPS11-203ENST00000529545 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
VPS11-203ENST00000529545 TRAV7A0A075B6U4 112 aa4.16□□□□□ -1.74
VPS11-203ENST00000529545 PDE6GP18545 87 aa4.16□□□□□ -1.74
VPS11-203ENST00000529545 H7BZZ5 65 aa4.14□□□□□ -1.75
VPS11-203ENST00000529545 CXCL6P80162 114 aa4.14□□□□□ -1.75
VPS11-203ENST00000529545 KLKP1Q107X0 134 aa4.14□□□□□ -1.75
VPS11-203ENST00000529545 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
VPS11-203ENST00000529545 UBL5Q9BZL1 73 aa4.13□□□□□ -1.75
VPS11-203ENST00000529545 Q6ZVQ6 151 aa4.12□□□□□ -1.75
VPS11-203ENST00000529545 Q5VV11 94 aa4.11□□□□□ -1.75
VPS11-203ENST00000529545 C8orf17Q9NRJ1 99 aa4.11□□□□□ -1.75
VPS11-203ENST00000529545 SERP1Q9Y6X1 66 aa4.11□□□□□ -1.75
VPS11-203ENST00000529545 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
VPS11-203ENST00000529545 C4orf26Q17RF5 130 aa4.1□□□□□ -1.75
VPS11-203ENST00000529545 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
VPS11-203ENST00000529545 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
VPS11-203ENST00000529545 NDUFC1O43677 76 aa4.08□□□□□ -1.76
VPS11-203ENST00000529545 C20orf197Q8N268 126 aa4.08□□□□□ -1.76
VPS11-203ENST00000529545 A0A1B0GW54 56 aa4.07□□□□□ -1.76
VPS11-203ENST00000529545 MT1BP07438 61 aa4.07□□□□□ -1.76
VPS11-203ENST00000529545 MT3P25713 68 aa4.07□□□□□ -1.76
VPS11-203ENST00000529545 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
VPS11-203ENST00000529545 SMIM26A0A096LP01 95 aa4.06□□□□□ -1.76
VPS11-203ENST00000529545 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
VPS11-203ENST00000529545 KMT2DO14686 5537 aa4.05□□□□□ -1.76
VPS11-203ENST00000529545 ATP5EP56381 51 aaPredicted RBP4.05□□□□□ -1.76
VPS11-203ENST00000529545 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
VPS11-203ENST00000529545 NDUFS5O43920 106 aa4.04□□□□□ -1.76
VPS11-203ENST00000529545 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
VPS11-203ENST00000529545 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
VPS11-203ENST00000529545 TMEM254Q8TBM7 123 aa4.03□□□□□ -1.76
VPS11-203ENST00000529545 MRPL34Q9BQ48 92 aaKnown RBP4.03□□□□□ -1.76
VPS11-203ENST00000529545 C7orf65Q6ZTY9 151 aa4.02□□□□□ -1.77
VPS11-203ENST00000529545 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
VPS11-203ENST00000529545 BPY2O14599 106 aa4.01□□□□□ -1.77
VPS11-203ENST00000529545 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
VPS11-203ENST00000529545 NREPQ16612 68 aa4□□□□□ -1.77
VPS11-203ENST00000529545 PRO0628Q9UI54 55 aa4□□□□□ -1.77
VPS11-203ENST00000529545 SNURFQ9Y675 71 aa4□□□□□ -1.77
VPS11-203ENST00000529545 MMP24-AS1A0A0U1RRL7 71 aa3.98□□□□□ -1.77
VPS11-203ENST00000529545 hDV103S1A0JD37 113 aa3.98□□□□□ -1.77
VPS11-203ENST00000529545 CSAG1Q6PB30 78 aa3.98□□□□□ -1.77
VPS11-203ENST00000529545 SPRR2EP22531 72 aa3.96□□□□□ -1.78
VPS11-203ENST00000529545 SPRR2BP35325 72 aa3.96□□□□□ -1.78
VPS11-203ENST00000529545 SPRR2AP35326 72 aa3.96□□□□□ -1.78
VPS11-203ENST00000529545 S4R3F8 94 aa3.96□□□□□ -1.78
VPS11-203ENST00000529545 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
VPS11-203ENST00000529545 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
VPS11-203ENST00000529545 CYP4F30PQ9H0H9 118 aa3.95□□□□□ -1.78
VPS11-203ENST00000529545 Q5W150 140 aa3.94□□□□□ -1.78
VPS11-203ENST00000529545 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
VPS11-203ENST00000529545 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
VPS11-203ENST00000529545 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
VPS11-203ENST00000529545 Q8N9L7 120 aa3.93□□□□□ -1.78
VPS11-203ENST00000529545 Q1T7F1 81 aa3.92□□□□□ -1.78
VPS11-203ENST00000529545 K7EQZ3 153 aa3.91□□□□□ -1.78
VPS11-203ENST00000529545 LCA10Q71F78 164 aa3.9□□□□□ -1.79
VPS11-203ENST00000529545 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
VPS11-203ENST00000529545 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
VPS11-203ENST00000529545 HCG22E2RYF7 251 aa3.88□□□□□ -1.79
VPS11-203ENST00000529545 CASC2Q6XLA1 102 aa3.87□□□□□ -1.79
VPS11-203ENST00000529545 H3BPC8 53 aa3.86□□□□□ -1.79
VPS11-203ENST00000529545 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
VPS11-203ENST00000529545 PRO2289Q9P1D8 64 aa3.86□□□□□ -1.79
VPS11-203ENST00000529545 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
VPS11-203ENST00000529545 SPRR2DP22532 72 aa3.84□□□□□ -1.79
VPS11-203ENST00000529545 TRAV22A0A0B4J277 110 aa3.83□□□□□ -1.8
VPS11-203ENST00000529545 V9GYY9 64 aa3.81□□□□□ -1.8
VPS11-203ENST00000529545 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
VPS11-203ENST00000529545 LOC101927531A0A1B0GV80 90 aa3.78□□□□□ -1.8
VPS11-203ENST00000529545 MP68P56378 58 aa3.77□□□□□ -1.81
VPS11-203ENST00000529545 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
VPS11-203ENST00000529545 LINC00208Q96KT6 92 aa3.76□□□□□ -1.81
VPS11-203ENST00000529545 A8MUN3 132 aa3.75□□□□□ -1.81
VPS11-203ENST00000529545 H0Y9P7 68 aa3.75□□□□□ -1.81
VPS11-203ENST00000529545 MT1XP80297 61 aa3.75□□□□□ -1.81
VPS11-203ENST00000529545 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
VPS11-203ENST00000529545 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
VPS11-203ENST00000529545 TP53AIP1Q9HCN2 124 aa3.73□□□□□ -1.81
VPS11-203ENST00000529545 H0YAA0 97 aa3.72□□□□□ -1.81
VPS11-203ENST00000529545 PSPHP1O15172 72 aa3.72□□□□□ -1.81
VPS11-203ENST00000529545 LINC01558Q9Y6Z2 57 aa3.72□□□□□ -1.81
VPS11-203ENST00000529545 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
VPS11-203ENST00000529545 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
VPS11-203ENST00000529545 SEC61GP60059 68 aa3.71□□□□□ -1.82
VPS11-203ENST00000529545 A8MU10 97 aa3.7□□□□□ -1.82
VPS11-203ENST00000529545 COA5Q86WW8 74 aa3.7□□□□□ -1.82
VPS11-203ENST00000529545 ADM2Q7Z4H4 148 aa3.68□□□□□ -1.82
VPS11-203ENST00000529545 CDC42SE1Q9NRR8 79 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms