RNA–Protein interactions for RNA: ENST00000527495.5

CCDC90B-209, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-209ENST00000527495 NCOR2Q9Y618 2525 aa0.71□□□□□ -2.3
CCDC90B-209ENST00000527495 RPS29P62273 56 aaKnown RBP0.71□□□□□ -2.3
CCDC90B-209ENST00000527495 Q9Y3F1 56 aa0.71□□□□□ -2.3
CCDC90B-209ENST00000527495 CFAP54Q96N23 3096 aa0.71□□□□□ -2.3
CCDC90B-209ENST00000527495 ANKRD11Q6UB99 2663 aaPredicted RBP0.71□□□□□ -2.3
CCDC90B-209ENST00000527495 DNAH1Q9P2D7 4330 aa0.7□□□□□ -2.3
CCDC90B-209ENST00000527495 TENM3Q9P273 2699 aa0.7□□□□□ -2.3
CCDC90B-209ENST00000527495 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
CCDC90B-209ENST00000527495 KRTAP6-2Q3LI66 62 aa0.7□□□□□ -2.3
CCDC90B-209ENST00000527495 DNAH10Q8IVF4 4471 aa0.69□□□□□ -2.3
CCDC90B-209ENST00000527495 FRYLO94915 3013 aa0.69□□□□□ -2.3
CCDC90B-209ENST00000527495 LRP1Q07954 4544 aaKnown RBP0.69□□□□□ -2.3
CCDC90B-209ENST00000527495 RIF1Q5UIP0 2472 aaKnown RBP0.69□□□□□ -2.3
CCDC90B-209ENST00000527495 MT1AP04731 61 aa0.69□□□□□ -2.3
CCDC90B-209ENST00000527495 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
CCDC90B-209ENST00000527495 LRRK2Q5S007 2527 aa0.69□□□□□ -2.3
CCDC90B-209ENST00000527495 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
CCDC90B-209ENST00000527495 SPRR2AP35326 72 aa0.68□□□□□ -2.3
CCDC90B-209ENST00000527495 FAM186AA6NE01 2351 aa0.68□□□□□ -2.3
CCDC90B-209ENST00000527495 UNC79Q9P2D8 2635 aa0.68□□□□□ -2.3
CCDC90B-209ENST00000527495 FAT3Q8TDW7 4589 aa0.67□□□□□ -2.3
CCDC90B-209ENST00000527495 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
CCDC90B-209ENST00000527495 LAMA5O15230 3695 aa0.66□□□□□ -2.3
CCDC90B-209ENST00000527495 SONP18583 2426 aaKnown RBP0.66□□□□□ -2.3
CCDC90B-209ENST00000527495 SPG11Q96JI7 2443 aa0.66□□□□□ -2.3
CCDC90B-209ENST00000527495 EPG5Q9HCE0 2579 aa0.66□□□□□ -2.3
CCDC90B-209ENST00000527495 NBEAL2Q6ZNJ1 2754 aa0.66□□□□□ -2.3
CCDC90B-209ENST00000527495 ANKHD1Q8IWZ3 2542 aaKnown RBP0.66□□□□□ -2.3
CCDC90B-209ENST00000527495 TEP1Q99973 2627 aaKnown RBP0.66□□□□□ -2.3
CCDC90B-209ENST00000527495 NIPBLQ6KC79 2804 aaeCLIP0.65□□□□□ -2.3
CCDC90B-209ENST00000527495 APOBP04114 4563 aaKnown RBP0.65□□□□□ -2.31
CCDC90B-209ENST00000527495 ZANQ9Y493 2812 aa0.65□□□□□ -2.31
CCDC90B-209ENST00000527495 PKHD1P08F94 4074 aa0.65□□□□□ -2.31
CCDC90B-209ENST00000527495 TRIOO75962 3097 aa0.65□□□□□ -2.31
CCDC90B-209ENST00000527495 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
CCDC90B-209ENST00000527495 CMYA5Q8N3K9 4069 aa0.64□□□□□ -2.31
CCDC90B-209ENST00000527495 CD52P31358 61 aa0.64□□□□□ -2.31
CCDC90B-209ENST00000527495 LPAP08519 4548 aa0.64□□□□□ -2.31
CCDC90B-209ENST00000527495 LRBAP50851 2863 aa0.64□□□□□ -2.31
CCDC90B-209ENST00000527495 C5orf42Q9H799 3197 aa0.64□□□□□ -2.31
CCDC90B-209ENST00000527495 CSMD1Q96PZ7 3565 aa0.64□□□□□ -2.31
CCDC90B-209ENST00000527495 FLNBO75369 2602 aaKnown RBP0.64□□□□□ -2.31
CCDC90B-209ENST00000527495 CEP250Q9BV73 2442 aa0.64□□□□□ -2.31
CCDC90B-209ENST00000527495 PLECQ15149 4684 aaKnown RBP0.63□□□□□ -2.31
CCDC90B-209ENST00000527495 LAMA3Q16787 3333 aa0.63□□□□□ -2.31
CCDC90B-209ENST00000527495 DMXL2Q8TDJ6 3036 aa0.63□□□□□ -2.31
CCDC90B-209ENST00000527495 TLN2Q9Y4G6 2542 aa0.63□□□□□ -2.31
CCDC90B-209ENST00000527495 SPRR2FQ96RM1 72 aa0.63□□□□□ -2.31
CCDC90B-209ENST00000527495 BOD1L1Q8NFC6 3051 aa0.63□□□□□ -2.31
CCDC90B-209ENST00000527495 HRNRQ86YZ3 2850 aaPredicted RBP0.63□□□□□ -2.31
CCDC90B-209ENST00000527495 UTP20O75691 2785 aaKnown RBP0.62□□□□□ -2.31
CCDC90B-209ENST00000527495 HTN3P15516 51 aa0.62□□□□□ -2.31
CCDC90B-209ENST00000527495 SPRR2EP22531 72 aa0.62□□□□□ -2.31
CCDC90B-209ENST00000527495 USP9XQ93008 2570 aaPredicted RBP0.62□□□□□ -2.31
CCDC90B-209ENST00000527495 ATMQ13315 3056 aa0.62□□□□□ -2.31
CCDC90B-209ENST00000527495 KALRNO60229 2985 aa0.62□□□□□ -2.31
CCDC90B-209ENST00000527495 NBEAQ8NFP9 2946 aa0.61□□□□□ -2.31
CCDC90B-209ENST00000527495 DNAH12Q6ZR08 3092 aa0.61□□□□□ -2.31
CCDC90B-209ENST00000527495 PRUNE2Q8WUY3 3088 aa0.61□□□□□ -2.31
CCDC90B-209ENST00000527495 MXRA5Q9NR99 2828 aa0.6□□□□□ -2.31
CCDC90B-209ENST00000527495 DNAH9Q9NYC9 4486 aa0.6□□□□□ -2.31
CCDC90B-209ENST00000527495 ITPR1Q14643 2758 aa0.6□□□□□ -2.31
CCDC90B-209ENST00000527495 SPTBN5Q9NRC6 3674 aaKnown RBP0.59□□□□□ -2.31
CCDC90B-209ENST00000527495 FAT1Q14517 4588 aa0.59□□□□□ -2.31
CCDC90B-209ENST00000527495 DNAH5Q8TE73 4624 aa0.59□□□□□ -2.31
CCDC90B-209ENST00000527495 CEP350Q5VT06 3117 aa0.58□□□□□ -2.32
CCDC90B-209ENST00000527495 FLNAP21333 2647 aaKnown RBP0.58□□□□□ -2.32
CCDC90B-209ENST00000527495 SMG1Q96Q15 3661 aaKnown RBP0.58□□□□□ -2.32
CCDC90B-209ENST00000527495 SVEP1Q4LDE5 3571 aa0.58□□□□□ -2.32
CCDC90B-209ENST00000527495 MAP1AP78559 2803 aaPredicted RBP0.58□□□□□ -2.32
CCDC90B-209ENST00000527495 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
CCDC90B-209ENST00000527495 SZT2Q5T011 3432 aa0.58□□□□□ -2.32
CCDC90B-209ENST00000527495 LAMA1P25391 3075 aa0.58□□□□□ -2.32
CCDC90B-209ENST00000527495 TGP01266 2768 aa0.57□□□□□ -2.32
CCDC90B-209ENST00000527495 DCHS1Q96JQ0 3298 aa0.57□□□□□ -2.32
CCDC90B-209ENST00000527495 LRP1BQ9NZR2 4599 aa0.57□□□□□ -2.32
CCDC90B-209ENST00000527495 TRRAPQ9Y4A5 3859 aa0.57□□□□□ -2.32
CCDC90B-209ENST00000527495 MYO18BQ8IUG5 2567 aa0.56□□□□□ -2.32
CCDC90B-209ENST00000527495 FASNP49327 2511 aaKnown RBP0.55□□□□□ -2.32
CCDC90B-209ENST00000527495 TEX15Q9BXT5 2789 aa0.55□□□□□ -2.32
CCDC90B-209ENST00000527495 HTTP42858 3142 aa0.55□□□□□ -2.32
CCDC90B-209ENST00000527495 CSMD2Q7Z408 3487 aa0.54□□□□□ -2.32
CCDC90B-209ENST00000527495 CFAP46Q8IYW2 2715 aa0.54□□□□□ -2.32
CCDC90B-209ENST00000527495 MKI67P46013 3256 aaKnown RBP0.54□□□□□ -2.32
CCDC90B-209ENST00000527495 HERC1Q15751 4861 aa0.54□□□□□ -2.32
CCDC90B-209ENST00000527495 XIRP2A4UGR9 3374 aa0.54□□□□□ -2.32
CCDC90B-209ENST00000527495 FREM2Q5SZK8 3169 aa0.53□□□□□ -2.32
CCDC90B-209ENST00000527495 DNAH17Q9UFH2 4485 aa0.52□□□□□ -2.33
CCDC90B-209ENST00000527495 DEFB4AO15263 64 aa0.52□□□□□ -2.33
CCDC90B-209ENST00000527495 DYNC1H1Q14204 4646 aaKnown RBP0.52□□□□□ -2.33
CCDC90B-209ENST00000527495 CFAP47Q6ZTR5 3102 aa0.51□□□□□ -2.33
CCDC90B-209ENST00000527495 DMDP11532 3685 aa0.51□□□□□ -2.33
CCDC90B-209ENST00000527495 ADGRG4Q8IZF6 3080 aa0.51□□□□□ -2.33
CCDC90B-209ENST00000527495 MUC3AQ02505 3323 aa0.5□□□□□ -2.33
CCDC90B-209ENST00000527495 WDFY4Q6ZS81 3184 aa0.5□□□□□ -2.33
CCDC90B-209ENST00000527495 ITPR2Q14571 2701 aa0.5□□□□□ -2.33
CCDC90B-209ENST00000527495 MGAM2Q2M2H8 2515 aa0.49□□□□□ -2.33
CCDC90B-209ENST00000527495 HMCN2Q8NDA2 5059 aa0.49□□□□□ -2.33
CCDC90B-209ENST00000527495 CENPEQ02224 2701 aa0.48□□□□□ -2.33
CCDC90B-209ENST00000527495 MT1EP04732 61 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms