RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 PLECQ15149 4684 aaKnown RBP5.45□□□□□ -1.54
FGFR1-227ENST00000526570 DNAH1Q9P2D7 4330 aa5.45□□□□□ -1.54
FGFR1-227ENST00000526570 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
FGFR1-227ENST00000526570 DNHD1Q96M86 4753 aa5.42□□□□□ -1.54
FGFR1-227ENST00000526570 CSMD3Q7Z407 3707 aa5.39□□□□□ -1.55
FGFR1-227ENST00000526570 VPS13DQ5THJ4 4388 aa5.35□□□□□ -1.55
FGFR1-227ENST00000526570 DNAH11Q96DT5 4516 aa5.33□□□□□ -1.56
FGFR1-227ENST00000526570 DNAH10Q8IVF4 4471 aa5.33□□□□□ -1.56
FGFR1-227ENST00000526570 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
FGFR1-227ENST00000526570 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
FGFR1-227ENST00000526570 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
FGFR1-227ENST00000526570 ANK2Q01484 3957 aa5.29□□□□□ -1.56
FGFR1-227ENST00000526570 STARD9Q9P2P6 4700 aa5.27□□□□□ -1.56
FGFR1-227ENST00000526570 DYNC1H1Q14204 4646 aaKnown RBP5.25□□□□□ -1.57
FGFR1-227ENST00000526570 DNAH3Q8TD57 4116 aa5.23□□□□□ -1.57
FGFR1-227ENST00000526570 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
FGFR1-227ENST00000526570 LRP1BQ9NZR2 4599 aa5.2□□□□□ -1.58
FGFR1-227ENST00000526570 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
FGFR1-227ENST00000526570 CMYA5Q8N3K9 4069 aa5.2□□□□□ -1.58
FGFR1-227ENST00000526570 PRKDCP78527 4128 aaKnown RBP5.2□□□□□ -1.58
FGFR1-227ENST00000526570 DNAH2Q9P225 4427 aa5.19□□□□□ -1.58
FGFR1-227ENST00000526570 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
FGFR1-227ENST00000526570 DYNC2H1Q8NCM8 4307 aaKnown RBP5.16□□□□□ -1.58
FGFR1-227ENST00000526570 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
FGFR1-227ENST00000526570 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
FGFR1-227ENST00000526570 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
FGFR1-227ENST00000526570 LYSTQ99698 3801 aa5.13□□□□□ -1.59
FGFR1-227ENST00000526570 DNAH6Q9C0G6 4158 aa5.11□□□□□ -1.59
FGFR1-227ENST00000526570 FAT1Q14517 4588 aa5.09□□□□□ -1.59
FGFR1-227ENST00000526570 SACSQ9NZJ4 4579 aa5.07□□□□□ -1.6
FGFR1-227ENST00000526570 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
FGFR1-227ENST00000526570 RYR1P21817 5038 aa5.05□□□□□ -1.6
FGFR1-227ENST00000526570 DNAH8Q96JB1 4490 aa5.05□□□□□ -1.6
FGFR1-227ENST00000526570 FRAS1Q86XX4 4008 aa5.04□□□□□ -1.6
FGFR1-227ENST00000526570 MT1HP80294 61 aa5.04□□□□□ -1.6
FGFR1-227ENST00000526570 DNAH7Q8WXX0 4024 aa5.01□□□□□ -1.61
FGFR1-227ENST00000526570 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
FGFR1-227ENST00000526570 RYR3Q15413 4870 aa4.93□□□□□ -1.62
FGFR1-227ENST00000526570 HECTD4Q9Y4D8 3996 aa4.93□□□□□ -1.62
FGFR1-227ENST00000526570 VPS13BQ7Z7G8 4022 aa4.91□□□□□ -1.62
FGFR1-227ENST00000526570 MT2AP02795 61 aa4.91□□□□□ -1.62
FGFR1-227ENST00000526570 APOBP04114 4563 aaKnown RBP4.88□□□□□ -1.63
FGFR1-227ENST00000526570 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
FGFR1-227ENST00000526570 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
FGFR1-227ENST00000526570 RYR2Q92736 4967 aa4.84□□□□□ -1.63
FGFR1-227ENST00000526570 MT1FP04733 61 aa4.82□□□□□ -1.64
FGFR1-227ENST00000526570 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
FGFR1-227ENST00000526570 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
FGFR1-227ENST00000526570 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
FGFR1-227ENST00000526570 FAT3Q8TDW7 4589 aa4.74□□□□□ -1.65
FGFR1-227ENST00000526570 HYDINQ4G0P3 5121 aa4.74□□□□□ -1.65
FGFR1-227ENST00000526570 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
FGFR1-227ENST00000526570 BIRC6Q9NR09 4857 aa4.72□□□□□ -1.65
FGFR1-227ENST00000526570 HSPG2P98160 4391 aa4.69□□□□□ -1.66
FGFR1-227ENST00000526570 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
FGFR1-227ENST00000526570 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
FGFR1-227ENST00000526570 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
FGFR1-227ENST00000526570 HERC2O95714 4834 aa4.62□□□□□ -1.67
FGFR1-227ENST00000526570 KRTAP12-4P60329 112 aa4.59□□□□□ -1.68
FGFR1-227ENST00000526570 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.68
FGFR1-227ENST00000526570 PKD1P98161 4303 aa4.57□□□□□ -1.68
FGFR1-227ENST00000526570 PKHD1P08F94 4074 aa4.55□□□□□ -1.68
FGFR1-227ENST00000526570 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
FGFR1-227ENST00000526570 HERC1Q15751 4861 aa4.53□□□□□ -1.68
FGFR1-227ENST00000526570 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
FGFR1-227ENST00000526570 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
FGFR1-227ENST00000526570 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
FGFR1-227ENST00000526570 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
FGFR1-227ENST00000526570 LPAP08519 4548 aa4.44□□□□□ -1.7
FGFR1-227ENST00000526570 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
FGFR1-227ENST00000526570 PCLOQ9Y6V0 5065 aa4.42□□□□□ -1.7
FGFR1-227ENST00000526570 KMT2CQ8NEZ4 4911 aaKnown RBP4.41□□□□□ -1.7
FGFR1-227ENST00000526570 LRP2P98164 4655 aa4.4□□□□□ -1.7
FGFR1-227ENST00000526570 TNXBP22105 4242 aa4.4□□□□□ -1.71
FGFR1-227ENST00000526570 MT1BP07438 61 aa4.37□□□□□ -1.71
FGFR1-227ENST00000526570 MT1XP80297 61 aa4.37□□□□□ -1.71
FGFR1-227ENST00000526570 SPRR2EP22531 72 aa4.35□□□□□ -1.71
FGFR1-227ENST00000526570 SPRR2BP35325 72 aa4.35□□□□□ -1.71
FGFR1-227ENST00000526570 SPRR2AP35326 72 aa4.35□□□□□ -1.71
FGFR1-227ENST00000526570 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
FGFR1-227ENST00000526570 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.71
FGFR1-227ENST00000526570 ABCA13Q86UQ4 5058 aa4.26□□□□□ -1.73
FGFR1-227ENST00000526570 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
FGFR1-227ENST00000526570 KRTAP19-2Q3LHN2 52 aa4.25□□□□□ -1.73
FGFR1-227ENST00000526570 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
FGFR1-227ENST00000526570 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
FGFR1-227ENST00000526570 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
FGFR1-227ENST00000526570 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
FGFR1-227ENST00000526570 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
FGFR1-227ENST00000526570 SPRR2DP22532 72 aa4.21□□□□□ -1.74
FGFR1-227ENST00000526570 MT3P25713 68 aa4.21□□□□□ -1.74
FGFR1-227ENST00000526570 LCE2BO14633 110 aa4.18□□□□□ -1.74
FGFR1-227ENST00000526570 MT1GP13640 62 aa4.12□□□□□ -1.75
FGFR1-227ENST00000526570 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
FGFR1-227ENST00000526570 PRM1P04553 51 aa4.08□□□□□ -1.76
FGFR1-227ENST00000526570 KRTAP9-2Q9BYQ4 174 aa4.08□□□□□ -1.76
FGFR1-227ENST00000526570 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
FGFR1-227ENST00000526570 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
FGFR1-227ENST00000526570 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
FGFR1-227ENST00000526570 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms