RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 ANK3Q12955 4377 aaKnown RBP5.04□□□□□ -1.6
KDM2A-207ENST00000526258 CSMD2Q7Z408 3487 aa5.02□□□□□ -1.61
KDM2A-207ENST00000526258 CSMD3Q7Z407 3707 aa4.98□□□□□ -1.61
KDM2A-207ENST00000526258 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
KDM2A-207ENST00000526258 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
KDM2A-207ENST00000526258 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
KDM2A-207ENST00000526258 HUWE1Q7Z6Z7 4374 aaKnown RBP4.92□□□□□ -1.62
KDM2A-207ENST00000526258 DNAH11Q96DT5 4516 aa4.91□□□□□ -1.62
KDM2A-207ENST00000526258 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
KDM2A-207ENST00000526258 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
KDM2A-207ENST00000526258 DNAH10Q8IVF4 4471 aa4.85□□□□□ -1.63
KDM2A-207ENST00000526258 FAT1Q14517 4588 aa4.85□□□□□ -1.63
KDM2A-207ENST00000526258 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
KDM2A-207ENST00000526258 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
KDM2A-207ENST00000526258 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
KDM2A-207ENST00000526258 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
KDM2A-207ENST00000526258 DNAH2Q9P225 4427 aa4.76□□□□□ -1.65
KDM2A-207ENST00000526258 ZNF469Q96JG9 3925 aaPredicted RBP4.74□□□□□ -1.65
KDM2A-207ENST00000526258 DNAH5Q8TE73 4624 aa4.72□□□□□ -1.65
KDM2A-207ENST00000526258 MT2AP02795 61 aa4.72□□□□□ -1.65
KDM2A-207ENST00000526258 AKAP9Q99996 3911 aa4.71□□□□□ -1.65
KDM2A-207ENST00000526258 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
KDM2A-207ENST00000526258 MT1HP80294 61 aa4.68□□□□□ -1.66
KDM2A-207ENST00000526258 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
KDM2A-207ENST00000526258 DNAH1Q9P2D7 4330 aa4.66□□□□□ -1.66
KDM2A-207ENST00000526258 LCE3BQ5TA77 95 aa4.65□□□□□ -1.66
KDM2A-207ENST00000526258 MT1FP04733 61 aa4.61□□□□□ -1.67
KDM2A-207ENST00000526258 PLECQ15149 4684 aaKnown RBP4.61□□□□□ -1.67
KDM2A-207ENST00000526258 DNAH17Q9UFH2 4485 aa4.57□□□□□ -1.68
KDM2A-207ENST00000526258 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
KDM2A-207ENST00000526258 DNAH9Q9NYC9 4486 aa4.51□□□□□ -1.69
KDM2A-207ENST00000526258 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
KDM2A-207ENST00000526258 MT1GP13640 62 aa4.47□□□□□ -1.69
KDM2A-207ENST00000526258 SACSQ9NZJ4 4579 aa4.45□□□□□ -1.7
KDM2A-207ENST00000526258 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
KDM2A-207ENST00000526258 KRTAP19-8Q3LI54 63 aa4.42□□□□□ -1.7
KDM2A-207ENST00000526258 VPS13DQ5THJ4 4388 aa4.41□□□□□ -1.7
KDM2A-207ENST00000526258 MT1XP80297 61 aa4.41□□□□□ -1.7
KDM2A-207ENST00000526258 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
KDM2A-207ENST00000526258 LRP1BQ9NZR2 4599 aa4.4□□□□□ -1.71
KDM2A-207ENST00000526258 FAT3Q8TDW7 4589 aa4.36□□□□□ -1.71
KDM2A-207ENST00000526258 DYNC1H1Q14204 4646 aaKnown RBP4.35□□□□□ -1.71
KDM2A-207ENST00000526258 ANK2Q01484 3957 aa4.34□□□□□ -1.72
KDM2A-207ENST00000526258 DNAH3Q8TD57 4116 aa4.31□□□□□ -1.72
KDM2A-207ENST00000526258 SPRR2EP22531 72 aa4.3□□□□□ -1.72
KDM2A-207ENST00000526258 SPRR2BP35325 72 aa4.3□□□□□ -1.72
KDM2A-207ENST00000526258 SPRR2AP35326 72 aa4.3□□□□□ -1.72
KDM2A-207ENST00000526258 MYCBP2O75592 4640 aa4.3□□□□□ -1.72
KDM2A-207ENST00000526258 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
KDM2A-207ENST00000526258 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
KDM2A-207ENST00000526258 MT1BP07438 61 aa4.25□□□□□ -1.73
KDM2A-207ENST00000526258 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
KDM2A-207ENST00000526258 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
KDM2A-207ENST00000526258 RYR1P21817 5038 aa4.22□□□□□ -1.73
KDM2A-207ENST00000526258 PRM1P04553 51 aa4.22□□□□□ -1.73
KDM2A-207ENST00000526258 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
KDM2A-207ENST00000526258 SPRR2DP22532 72 aa4.19□□□□□ -1.74
KDM2A-207ENST00000526258 STARD9Q9P2P6 4700 aa4.19□□□□□ -1.74
KDM2A-207ENST00000526258 FAT2Q9NYQ8 4349 aa4.19□□□□□ -1.74
KDM2A-207ENST00000526258 FRAS1Q86XX4 4008 aa4.17□□□□□ -1.74
KDM2A-207ENST00000526258 CMYA5Q8N3K9 4069 aa4.16□□□□□ -1.74
KDM2A-207ENST00000526258 LYSTQ99698 3801 aa4.16□□□□□ -1.74
KDM2A-207ENST00000526258 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
KDM2A-207ENST00000526258 LCE2BO14633 110 aa4.14□□□□□ -1.75
KDM2A-207ENST00000526258 DNAH6Q9C0G6 4158 aa4.14□□□□□ -1.75
KDM2A-207ENST00000526258 MT1LQ93083 61 aa4.08□□□□□ -1.76
KDM2A-207ENST00000526258 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
KDM2A-207ENST00000526258 KMT2AQ03164 3969 aa4.05□□□□□ -1.76
KDM2A-207ENST00000526258 PRKDCP78527 4128 aaKnown RBP4.04□□□□□ -1.76
KDM2A-207ENST00000526258 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
KDM2A-207ENST00000526258 DNHD1Q96M86 4753 aa4.04□□□□□ -1.76
KDM2A-207ENST00000526258 DNAH7Q8WXX0 4024 aa4.02□□□□□ -1.77
KDM2A-207ENST00000526258 HECTD4Q9Y4D8 3996 aa4.01□□□□□ -1.77
KDM2A-207ENST00000526258 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
KDM2A-207ENST00000526258 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
KDM2A-207ENST00000526258 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
KDM2A-207ENST00000526258 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
KDM2A-207ENST00000526258 MT1EP04732 61 aa3.94□□□□□ -1.78
KDM2A-207ENST00000526258 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
KDM2A-207ENST00000526258 LRP2P98164 4655 aa3.92□□□□□ -1.78
KDM2A-207ENST00000526258 MT3P25713 68 aa3.91□□□□□ -1.78
KDM2A-207ENST00000526258 LCE2CQ5TA81 110 aa3.91□□□□□ -1.78
KDM2A-207ENST00000526258 RYR3Q15413 4870 aa3.9□□□□□ -1.78
KDM2A-207ENST00000526258 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
KDM2A-207ENST00000526258 PKD1P98161 4303 aa3.85□□□□□ -1.79
KDM2A-207ENST00000526258 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
KDM2A-207ENST00000526258 LCE2DQ5TA82 110 aaPredicted RBP3.85□□□□□ -1.79
KDM2A-207ENST00000526258 KRTAP17-1Q9BYP8 105 aa3.85□□□□□ -1.79
KDM2A-207ENST00000526258 MT1MQ8N339 61 aa3.81□□□□□ -1.8
KDM2A-207ENST00000526258 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
KDM2A-207ENST00000526258 HSPG2P98160 4391 aa3.8□□□□□ -1.8
KDM2A-207ENST00000526258 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
KDM2A-207ENST00000526258 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
KDM2A-207ENST00000526258 HERC2O95714 4834 aa3.78□□□□□ -1.8
KDM2A-207ENST00000526258 RYR2Q92736 4967 aa3.78□□□□□ -1.81
KDM2A-207ENST00000526258 KMT2CQ8NEZ4 4911 aaKnown RBP3.78□□□□□ -1.81
KDM2A-207ENST00000526258 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
KDM2A-207ENST00000526258 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
KDM2A-207ENST00000526258 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
KDM2A-207ENST00000526258 HERC1Q15751 4861 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms