RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 MEGF8Q7Z7M0 2845 aa0.98□□□□□ -2.25
CSDE1-211ENST00000525970 UBR5O95071 2799 aaPredicted RBP0.98□□□□□ -2.25
CSDE1-211ENST00000525970 PKD1L2Q7Z442 2459 aa0.97□□□□□ -2.25
CSDE1-211ENST00000525970 ASPMQ8IZT6 3477 aa0.97□□□□□ -2.25
CSDE1-211ENST00000525970 POLQO75417 2590 aa0.97□□□□□ -2.25
CSDE1-211ENST00000525970 MXRA5Q9NR99 2828 aa0.97□□□□□ -2.25
CSDE1-211ENST00000525970 SMR3BP02814 79 aaPredicted RBP0.97□□□□□ -2.25
CSDE1-211ENST00000525970 TTC28Q96AY4 2481 aa0.97□□□□□ -2.25
CSDE1-211ENST00000525970 HECTD1Q9ULT8 2610 aa0.97□□□□□ -2.25
CSDE1-211ENST00000525970 SETD2Q9BYW2 2564 aaPredicted RBP0.97□□□□□ -2.25
CSDE1-211ENST00000525970 RELNP78509 3460 aa0.96□□□□□ -2.25
CSDE1-211ENST00000525970 HIVEP1P15822 2718 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 ACACBO00763 2458 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 ITPR3Q14573 2671 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 FAM208BQ5VWN6 2430 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 BDP1A6H8Y1 2624 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 LAMA5O15230 3695 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 USP9YO00507 2555 aaPredicted RBP0.96□□□□□ -2.26
CSDE1-211ENST00000525970 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 ACANP16112 2415 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 FLNAP21333 2647 aaKnown RBP0.96□□□□□ -2.26
CSDE1-211ENST00000525970 ZANQ9Y493 2812 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 ABCA12Q86UK0 2595 aa0.96□□□□□ -2.26
CSDE1-211ENST00000525970 ZNF292O60281 2723 aa0.95□□□□□ -2.26
CSDE1-211ENST00000525970 CFAP46Q8IYW2 2715 aa0.95□□□□□ -2.26
CSDE1-211ENST00000525970 COL6A5A8TX70 2615 aa0.95□□□□□ -2.26
CSDE1-211ENST00000525970 TGP01266 2768 aa0.95□□□□□ -2.26
CSDE1-211ENST00000525970 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
CSDE1-211ENST00000525970 TNP1P09430 55 aa0.95□□□□□ -2.26
CSDE1-211ENST00000525970 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
CSDE1-211ENST00000525970 TENM4Q6N022 2769 aa0.95□□□□□ -2.26
CSDE1-211ENST00000525970 AKAP9Q99996 3911 aa0.95□□□□□ -2.26
CSDE1-211ENST00000525970 CACNA1AO00555 2505 aa0.94□□□□□ -2.26
CSDE1-211ENST00000525970 NIPBLQ6KC79 2804 aaeCLIP0.94□□□□□ -2.26
CSDE1-211ENST00000525970 SVEP1Q4LDE5 3571 aa0.94□□□□□ -2.26
CSDE1-211ENST00000525970 BSNQ9UPA5 3926 aa0.94□□□□□ -2.26
CSDE1-211ENST00000525970 FRAS1Q86XX4 4008 aa0.93□□□□□ -2.26
CSDE1-211ENST00000525970 MAST4O15021 2626 aa0.93□□□□□ -2.26
CSDE1-211ENST00000525970 MUC3AQ02505 3323 aa0.93□□□□□ -2.26
CSDE1-211ENST00000525970 PDZD2O15018 2839 aa0.93□□□□□ -2.26
CSDE1-211ENST00000525970 MYO18BQ8IUG5 2567 aa0.92□□□□□ -2.26
CSDE1-211ENST00000525970 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
CSDE1-211ENST00000525970 DNAH1Q9P2D7 4330 aa0.92□□□□□ -2.26
CSDE1-211ENST00000525970 NBPF19A0A087WUL8 3843 aa0.91□□□□□ -2.26
CSDE1-211ENST00000525970 PKD1L1Q8TDX9 2849 aa0.91□□□□□ -2.26
CSDE1-211ENST00000525970 COL7A1Q02388 2944 aa0.91□□□□□ -2.26
CSDE1-211ENST00000525970 Q5VSD8 79 aa0.91□□□□□ -2.26
CSDE1-211ENST00000525970 CSMD2Q7Z408 3487 aa0.91□□□□□ -2.26
CSDE1-211ENST00000525970 FASNP49327 2511 aaKnown RBP0.91□□□□□ -2.26
CSDE1-211ENST00000525970 VPS13CQ709C8 3753 aa0.91□□□□□ -2.26
CSDE1-211ENST00000525970 ANK3Q12955 4377 aaKnown RBP0.91□□□□□ -2.26
CSDE1-211ENST00000525970 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
CSDE1-211ENST00000525970 NSD1Q96L73 2696 aaPredicted RBP0.9□□□□□ -2.27
CSDE1-211ENST00000525970 FLNBO75369 2602 aaKnown RBP0.9□□□□□ -2.27
CSDE1-211ENST00000525970 TEP1Q99973 2627 aaKnown RBP0.9□□□□□ -2.27
CSDE1-211ENST00000525970 NBEAL1Q6ZS30 2694 aa0.9□□□□□ -2.27
CSDE1-211ENST00000525970 DMBT1Q9UGM3 2413 aaPredicted RBP0.89□□□□□ -2.27
CSDE1-211ENST00000525970 VWFP04275 2813 aa0.89□□□□□ -2.27
CSDE1-211ENST00000525970 DNAH8Q96JB1 4490 aa0.89□□□□□ -2.27
CSDE1-211ENST00000525970 VPS13DQ5THJ4 4388 aa0.89□□□□□ -2.27
CSDE1-211ENST00000525970 ATRQ13535 2644 aa0.89□□□□□ -2.27
CSDE1-211ENST00000525970 DNAH10Q8IVF4 4471 aa0.89□□□□□ -2.27
CSDE1-211ENST00000525970 FLNCQ14315 2725 aa0.88□□□□□ -2.27
CSDE1-211ENST00000525970 IGSF10Q6WRI0 2623 aa0.88□□□□□ -2.27
CSDE1-211ENST00000525970 CUBNO60494 3623 aa0.87□□□□□ -2.27
CSDE1-211ENST00000525970 DNAH3Q8TD57 4116 aa0.87□□□□□ -2.27
CSDE1-211ENST00000525970 CMYA5Q8N3K9 4069 aa0.87□□□□□ -2.27
CSDE1-211ENST00000525970 ITPR2Q14571 2701 aa0.87□□□□□ -2.27
CSDE1-211ENST00000525970 MGAM2Q2M2H8 2515 aa0.86□□□□□ -2.27
CSDE1-211ENST00000525970 HUWE1Q7Z6Z7 4374 aaKnown RBP0.86□□□□□ -2.27
CSDE1-211ENST00000525970 DNAH17Q9UFH2 4485 aa0.86□□□□□ -2.27
CSDE1-211ENST00000525970 DNAH9Q9NYC9 4486 aa0.86□□□□□ -2.27
CSDE1-211ENST00000525970 STAB1Q9NY15 2570 aa0.86□□□□□ -2.27
CSDE1-211ENST00000525970 TRRAPQ9Y4A5 3859 aa0.86□□□□□ -2.27
CSDE1-211ENST00000525970 USP24Q9UPU5 2620 aa0.85□□□□□ -2.27
CSDE1-211ENST00000525970 ANK2Q01484 3957 aa0.85□□□□□ -2.27
CSDE1-211ENST00000525970 DNAH11Q96DT5 4516 aa0.85□□□□□ -2.27
CSDE1-211ENST00000525970 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.27
CSDE1-211ENST00000525970 DYNC2H1Q8NCM8 4307 aaKnown RBP0.84□□□□□ -2.27
CSDE1-211ENST00000525970 CSMD3Q7Z407 3707 aa0.84□□□□□ -2.28
CSDE1-211ENST00000525970 DNAH2Q9P225 4427 aa0.83□□□□□ -2.28
CSDE1-211ENST00000525970 PRKDCP78527 4128 aaKnown RBP0.83□□□□□ -2.28
CSDE1-211ENST00000525970 DNAH6Q9C0G6 4158 aa0.82□□□□□ -2.28
CSDE1-211ENST00000525970 LYSTQ99698 3801 aa0.82□□□□□ -2.28
CSDE1-211ENST00000525970 M0R2T5 61 aa0.81□□□□□ -2.28
CSDE1-211ENST00000525970 HECTD4Q9Y4D8 3996 aa0.8□□□□□ -2.28
CSDE1-211ENST00000525970 DNAH7Q8WXX0 4024 aa0.8□□□□□ -2.28
CSDE1-211ENST00000525970 AHNAK2Q8IVF2 5795 aa0.8□□□□□ -2.28
CSDE1-211ENST00000525970 MYCBP2O75592 4640 aa0.8□□□□□ -2.28
CSDE1-211ENST00000525970 SACSQ9NZJ4 4579 aa0.79□□□□□ -2.28
CSDE1-211ENST00000525970 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
CSDE1-211ENST00000525970 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
CSDE1-211ENST00000525970 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
CSDE1-211ENST00000525970 STARD9Q9P2P6 4700 aa0.79□□□□□ -2.28
CSDE1-211ENST00000525970 PLECQ15149 4684 aaKnown RBP0.78□□□□□ -2.28
CSDE1-211ENST00000525970 KMT2AQ03164 3969 aa0.78□□□□□ -2.29
CSDE1-211ENST00000525970 DNAH5Q8TE73 4624 aa0.77□□□□□ -2.29
CSDE1-211ENST00000525970 MT1HL1P0DM35 61 aa0.77□□□□□ -2.29
CSDE1-211ENST00000525970 LRP1BQ9NZR2 4599 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms