RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 MEGF8Q7Z7M0 2845 aa2.77□□□□□ -1.97
CTNND1-212ENST00000525902 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
CTNND1-212ENST00000525902 FBN3Q75N90 2809 aa2.75□□□□□ -1.97
CTNND1-212ENST00000525902 CUBNO60494 3623 aa2.75□□□□□ -1.97
CTNND1-212ENST00000525902 MT1HL1P0DM35 61 aa2.75□□□□□ -1.97
CTNND1-212ENST00000525902 CSMD2Q7Z408 3487 aa2.75□□□□□ -1.97
CTNND1-212ENST00000525902 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
CTNND1-212ENST00000525902 DNAH9Q9NYC9 4486 aa2.7□□□□□ -1.98
CTNND1-212ENST00000525902 DNAH17Q9UFH2 4485 aa2.68□□□□□ -1.98
CTNND1-212ENST00000525902 DNAH1Q9P2D7 4330 aa2.68□□□□□ -1.98
CTNND1-212ENST00000525902 DNAH3Q8TD57 4116 aa2.67□□□□□ -1.98
CTNND1-212ENST00000525902 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
CTNND1-212ENST00000525902 DNAH10Q8IVF4 4471 aa2.67□□□□□ -1.98
CTNND1-212ENST00000525902 DNAH2Q9P225 4427 aa2.67□□□□□ -1.98
CTNND1-212ENST00000525902 VPS13DQ5THJ4 4388 aa2.66□□□□□ -1.98
CTNND1-212ENST00000525902 ZNF469Q96JG9 3925 aaPredicted RBP2.66□□□□□ -1.98
CTNND1-212ENST00000525902 KRTAP10-5P60370 271 aa2.64□□□□□ -1.99
CTNND1-212ENST00000525902 PLECQ15149 4684 aaKnown RBP2.63□□□□□ -1.99
CTNND1-212ENST00000525902 CMYA5Q8N3K9 4069 aa2.62□□□□□ -1.99
CTNND1-212ENST00000525902 ANK2Q01484 3957 aa2.62□□□□□ -1.99
CTNND1-212ENST00000525902 DNAH11Q96DT5 4516 aa2.61□□□□□ -1.99
CTNND1-212ENST00000525902 KRTAP19-4Q3LI73 84 aa2.61□□□□□ -1.99
CTNND1-212ENST00000525902 DNAH8Q96JB1 4490 aa2.59□□□□□ -1.99
CTNND1-212ENST00000525902 DYNC2H1Q8NCM8 4307 aaKnown RBP2.57□□□□□ -2
CTNND1-212ENST00000525902 DNAH5Q8TE73 4624 aa2.57□□□□□ -2
CTNND1-212ENST00000525902 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
CTNND1-212ENST00000525902 COL7A1Q02388 2944 aa2.54□□□□□ -2
CTNND1-212ENST00000525902 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
CTNND1-212ENST00000525902 DNAH6Q9C0G6 4158 aa2.53□□□□□ -2
CTNND1-212ENST00000525902 MT3P25713 68 aa2.53□□□□□ -2
CTNND1-212ENST00000525902 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
CTNND1-212ENST00000525902 STARD9Q9P2P6 4700 aa2.51□□□□□ -2.01
CTNND1-212ENST00000525902 CSMD3Q7Z407 3707 aa2.51□□□□□ -2.01
CTNND1-212ENST00000525902 DNHD1Q96M86 4753 aa2.5□□□□□ -2.01
CTNND1-212ENST00000525902 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
CTNND1-212ENST00000525902 DYNC1H1Q14204 4646 aaKnown RBP2.49□□□□□ -2.01
CTNND1-212ENST00000525902 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.49□□□□□ -2.01
CTNND1-212ENST00000525902 KRTAP4-5Q9BYR2 181 aa2.48□□□□□ -2.01
CTNND1-212ENST00000525902 LRP1BQ9NZR2 4599 aa2.48□□□□□ -2.01
CTNND1-212ENST00000525902 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
CTNND1-212ENST00000525902 FAT2Q9NYQ8 4349 aa2.46□□□□□ -2.02
CTNND1-212ENST00000525902 KRTAP4-1Q9BYQ7 146 aa2.45□□□□□ -2.02
CTNND1-212ENST00000525902 LYSTQ99698 3801 aa2.45□□□□□ -2.02
CTNND1-212ENST00000525902 HECTD4Q9Y4D8 3996 aa2.44□□□□□ -2.02
CTNND1-212ENST00000525902 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
CTNND1-212ENST00000525902 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
CTNND1-212ENST00000525902 KRTAP4-8Q9BYQ9 185 aa2.42□□□□□ -2.02
CTNND1-212ENST00000525902 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
CTNND1-212ENST00000525902 PCLOQ9Y6V0 5065 aa2.4□□□□□ -2.02
CTNND1-212ENST00000525902 KMT2AQ03164 3969 aa2.4□□□□□ -2.03
CTNND1-212ENST00000525902 FRAS1Q86XX4 4008 aa2.39□□□□□ -2.03
CTNND1-212ENST00000525902 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
CTNND1-212ENST00000525902 KRTAP9-4Q9BYQ2 154 aa2.37□□□□□ -2.03
CTNND1-212ENST00000525902 FAT1Q14517 4588 aa2.37□□□□□ -2.03
CTNND1-212ENST00000525902 KRTAP9-2Q9BYQ4 174 aa2.36□□□□□ -2.03
CTNND1-212ENST00000525902 APOBP04114 4563 aaKnown RBP2.35□□□□□ -2.03
CTNND1-212ENST00000525902 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
CTNND1-212ENST00000525902 FAT3Q8TDW7 4589 aa2.35□□□□□ -2.03
CTNND1-212ENST00000525902 MT1HP80294 61 aa2.35□□□□□ -2.03
CTNND1-212ENST00000525902 MT2AP02795 61 aa2.34□□□□□ -2.03
CTNND1-212ENST00000525902 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
CTNND1-212ENST00000525902 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
CTNND1-212ENST00000525902 HSPG2P98160 4391 aa2.29□□□□□ -2.04
CTNND1-212ENST00000525902 MT1FP04733 61 aa2.29□□□□□ -2.04
CTNND1-212ENST00000525902 RYR3Q15413 4870 aa2.29□□□□□ -2.04
CTNND1-212ENST00000525902 PKHD1L1Q86WI1 4243 aa2.29□□□□□ -2.04
CTNND1-212ENST00000525902 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
CTNND1-212ENST00000525902 MYCBP2O75592 4640 aa2.29□□□□□ -2.04
CTNND1-212ENST00000525902 PKHD1P08F94 4074 aa2.28□□□□□ -2.04
CTNND1-212ENST00000525902 RYR2Q92736 4967 aa2.28□□□□□ -2.04
CTNND1-212ENST00000525902 KRTAP19-1Q8IUB9 90 aa2.28□□□□□ -2.04
CTNND1-212ENST00000525902 RYR1P21817 5038 aa2.26□□□□□ -2.05
CTNND1-212ENST00000525902 KRTAP9-6A0A140TA67 174 aa2.26□□□□□ -2.05
CTNND1-212ENST00000525902 LRP1Q07954 4544 aaKnown RBP2.26□□□□□ -2.05
CTNND1-212ENST00000525902 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
CTNND1-212ENST00000525902 PKD1P98161 4303 aa2.25□□□□□ -2.05
CTNND1-212ENST00000525902 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
CTNND1-212ENST00000525902 MT1XP80297 61 aa2.22□□□□□ -2.05
CTNND1-212ENST00000525902 KRTAP10-7P60409 375 aaPredicted RBP2.21□□□□□ -2.06
CTNND1-212ENST00000525902 HYDINQ4G0P3 5121 aa2.21□□□□□ -2.06
CTNND1-212ENST00000525902 BIRC6Q9NR09 4857 aa2.21□□□□□ -2.06
CTNND1-212ENST00000525902 KMT2CQ8NEZ4 4911 aaKnown RBP2.2□□□□□ -2.06
CTNND1-212ENST00000525902 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
CTNND1-212ENST00000525902 HERC1Q15751 4861 aa2.19□□□□□ -2.06
CTNND1-212ENST00000525902 KRTAP9-7A8MTY7 169 aa2.19□□□□□ -2.06
CTNND1-212ENST00000525902 TNXBP22105 4242 aa2.18□□□□□ -2.06
CTNND1-212ENST00000525902 MT1BP07438 61 aa2.18□□□□□ -2.06
CTNND1-212ENST00000525902 KRTAP4-8A0A0G2JLE6 195 aa2.17□□□□□ -2.06
CTNND1-212ENST00000525902 HERC2O95714 4834 aa2.17□□□□□ -2.06
CTNND1-212ENST00000525902 PRM1P04553 51 aa2.16□□□□□ -2.06
CTNND1-212ENST00000525902 KRTAP9-8Q9BYQ0 159 aa2.16□□□□□ -2.06
CTNND1-212ENST00000525902 LCE5AQ5TCM9 118 aa2.16□□□□□ -2.06
CTNND1-212ENST00000525902 KRTAP4-7Q9BYR0 210 aa2.15□□□□□ -2.07
CTNND1-212ENST00000525902 KIAA1109Q2LD37 5005 aa2.14□□□□□ -2.07
CTNND1-212ENST00000525902 EPPK1P58107 5090 aaKnown RBP2.14□□□□□ -2.07
CTNND1-212ENST00000525902 LCE3BQ5TA77 95 aa2.13□□□□□ -2.07
CTNND1-212ENST00000525902 LCE4AQ5TA78 99 aa2.12□□□□□ -2.07
CTNND1-212ENST00000525902 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
CTNND1-212ENST00000525902 KRTAP9-3Q9BYQ3 159 aa2.12□□□□□ -2.07
CTNND1-212ENST00000525902 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms