RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 H3BUA1 57 aa-1□□□□□ -2.57
CSDE1-210ENST00000525878 DEFB4AO15263 64 aa-1□□□□□ -2.57
CSDE1-210ENST00000525878 MRPL33O75394 65 aaKnown RBP-1□□□□□ -2.57
CSDE1-210ENST00000525878 S100PP25815 95 aa-1□□□□□ -2.57
CSDE1-210ENST00000525878 BVES-AS1Q5T3Y7 98 aa-1□□□□□ -2.57
CSDE1-210ENST00000525878 MINOS1Q5TGZ0 78 aa-1□□□□□ -2.57
CSDE1-210ENST00000525878 CFAP74Q9C0B2 1584 aa-1□□□□□ -2.57
CSDE1-210ENST00000525878 PREX2Q70Z35 1606 aa-1□□□□□ -2.57
CSDE1-210ENST00000525878 M0QZ58 72 aa-1.01□□□□□ -2.57
CSDE1-210ENST00000525878 ATP5EP2Q5VTU8 51 aa-1.01□□□□□ -2.57
CSDE1-210ENST00000525878 TCEAL7Q9BRU2 100 aa-1.01□□□□□ -2.57
CSDE1-210ENST00000525878 ALS2Q96Q42 1657 aa-1.01□□□□□ -2.57
CSDE1-210ENST00000525878 WDFY4Q6ZS81 3184 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 M0QY20 66 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 M0R143 59 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 SFTA3P0C7M3 94 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 TIAM1Q13009 1591 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 DEFB121Q5J5C9 76 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 PYY3Q5JQD4 70 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 LMTK2Q8IWU2 1503 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 UBL5Q9BZL1 73 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 C6orf48Q9UBA6 75 aa-1.02□□□□□ -2.57
CSDE1-210ENST00000525878 GLI2P10070 1586 aa-1.03□□□□□ -2.57
CSDE1-210ENST00000525878 PVALEFA0A1B0GWK0 134 aa-1.03□□□□□ -2.57
CSDE1-210ENST00000525878 S100A16Q96FQ6 103 aaKnown RBP-1.03□□□□□ -2.57
CSDE1-210ENST00000525878 USP34Q70CQ2 3546 aa-1.03□□□□□ -2.57
CSDE1-210ENST00000525878 MUC3AQ02505 3323 aa-1.03□□□□□ -2.57
CSDE1-210ENST00000525878 ABCA8O94911 1581 aa-1.04□□□□□ -2.58
CSDE1-210ENST00000525878 ABCC6O95255 1503 aa-1.04□□□□□ -2.58
CSDE1-210ENST00000525878 DCAF1Q9Y4B6 1507 aa-1.04□□□□□ -2.58
CSDE1-210ENST00000525878 ETDCA0A1B0GVM5 59 aa-1.04□□□□□ -2.58
CSDE1-210ENST00000525878 A8MTW9 85 aa-1.04□□□□□ -2.58
CSDE1-210ENST00000525878 SMIM13P0DJ93 91 aa-1.04□□□□□ -2.58
CSDE1-210ENST00000525878 FCER1GP30273 86 aa-1.04□□□□□ -2.58
CSDE1-210ENST00000525878 DCHS1Q96JQ0 3298 aa-1.05□□□□□ -2.58
CSDE1-210ENST00000525878 PKIAP61925 76 aa-1.05□□□□□ -2.58
CSDE1-210ENST00000525878 TDRG1Q3Y452 100 aa-1.05□□□□□ -2.58
CSDE1-210ENST00000525878 DNAH14Q0VDD8 3507 aa-1.05□□□□□ -2.58
CSDE1-210ENST00000525878 ENHOQ6UWT2 76 aa-1.06□□□□□ -2.58
CSDE1-210ENST00000525878 XIRP2A4UGR9 3374 aa-1.06□□□□□ -2.58
CSDE1-210ENST00000525878 ABCC1P33527 1531 aa-1.06□□□□□ -2.58
CSDE1-210ENST00000525878 CEP250Q9BV73 2442 aa-1.06□□□□□ -2.58
CSDE1-210ENST00000525878 IQGAP3Q86VI3 1631 aa-1.07□□□□□ -2.58
CSDE1-210ENST00000525878 ABCA9Q8IUA7 1624 aa-1.07□□□□□ -2.58
CSDE1-210ENST00000525878 EP400Q96L91 3159 aa-1.07□□□□□ -2.58
CSDE1-210ENST00000525878 KANTRA0A1W2PQU2 76 aa-1.07□□□□□ -2.58
CSDE1-210ENST00000525878 MT1FP04733 61 aa-1.07□□□□□ -2.58
CSDE1-210ENST00000525878 DEFB114Q30KQ6 69 aa-1.07□□□□□ -2.58
CSDE1-210ENST00000525878 A0A087WXM4 84 aa-1.08□□□□□ -2.58
CSDE1-210ENST00000525878 S100A8P05109 93 aa-1.08□□□□□ -2.58
CSDE1-210ENST00000525878 SPART-AS1P0CW21 52 aa-1.08□□□□□ -2.58
CSDE1-210ENST00000525878 LEAP2Q969E1 77 aa-1.08□□□□□ -2.58
CSDE1-210ENST00000525878 LMO7Q8WWI1 1683 aa-1.08□□□□□ -2.58
CSDE1-210ENST00000525878 UACAQ9BZF9 1416 aa-1.08□□□□□ -2.58
CSDE1-210ENST00000525878 MROH2AA6NES4 1674 aa-1.09□□□□□ -2.58
CSDE1-210ENST00000525878 V9GYS6 101 aa-1.09□□□□□ -2.58
CSDE1-210ENST00000525878 DNAH12Q6ZR08 3092 aa-1.09□□□□□ -2.58
CSDE1-210ENST00000525878 UNC80Q8N2C7 3258 aa-1.09□□□□□ -2.58
CSDE1-210ENST00000525878 MKI67P46013 3256 aaKnown RBP-1.1□□□□□ -2.59
CSDE1-210ENST00000525878 DEFB136Q30KP8 78 aa-1.1□□□□□ -2.59
CSDE1-210ENST00000525878 KRTAP19-6Q3LI70 58 aa-1.1□□□□□ -2.59
CSDE1-210ENST00000525878 ANKARQ7Z5J8 1434 aa-1.1□□□□□ -2.59
CSDE1-210ENST00000525878 CENPEQ02224 2701 aa-1.1□□□□□ -2.59
CSDE1-210ENST00000525878 CFAP47Q6ZTR5 3102 aa-1.11□□□□□ -2.59
CSDE1-210ENST00000525878 RRBP1Q9P2E9 1410 aaKnown RBP-1.11□□□□□ -2.59
CSDE1-210ENST00000525878 H3BUT2 72 aa-1.11□□□□□ -2.59
CSDE1-210ENST00000525878 RPS29P62273 56 aaKnown RBP-1.11□□□□□ -2.59
CSDE1-210ENST00000525878 ST20Q9HBF5 79 aa-1.11□□□□□ -2.59
CSDE1-210ENST00000525878 CCDC180Q9P1Z9 1646 aa-1.12□□□□□ -2.59
CSDE1-210ENST00000525878 ABCA6Q8N139 1617 aa-1.13□□□□□ -2.59
CSDE1-210ENST00000525878 Q9H521 79 aa-1.13□□□□□ -2.59
CSDE1-210ENST00000525878 KAAG1Q9UBP8 84 aa-1.13□□□□□ -2.59
CSDE1-210ENST00000525878 RB1CC1Q8TDY2 1594 aa-1.13□□□□□ -2.59
CSDE1-210ENST00000525878 ADIRFQ15847 76 aa-1.14□□□□□ -2.59
CSDE1-210ENST00000525878 C18orf32Q8TCD1 76 aa-1.15□□□□□ -2.59
CSDE1-210ENST00000525878 H3BVH4 76 aa-1.16□□□□□ -2.6
CSDE1-210ENST00000525878 EFCAB6Q5THR3 1501 aa-1.16□□□□□ -2.6
CSDE1-210ENST00000525878 ASPMQ8IZT6 3477 aa-1.16□□□□□ -2.6
CSDE1-210ENST00000525878 DDX60Q8IY21 1712 aaKnown RBP-1.17□□□□□ -2.6
CSDE1-210ENST00000525878 ABRACLQ9P1F3 81 aa-1.17□□□□□ -2.6
CSDE1-210ENST00000525878 K7EMI3 77 aa-1.18□□□□□ -2.6
CSDE1-210ENST00000525878 POLR2KP53803 58 aaKnown RBP-1.18□□□□□ -2.6
CSDE1-210ENST00000525878 ATXN8Q156A1 80 aa-1.18□□□□□ -2.6
CSDE1-210ENST00000525878 NRXN3Q9Y4C0 1643 aa-1.18□□□□□ -2.6
CSDE1-210ENST00000525878 SYCP2Q9BX26 1530 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 UGGT2Q9NYU1 1516 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 SMIM27A0A1W2PRY6 76 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 LOC400499M0QZD8 3231 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 EEA1Q15075 1411 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 WFDC10BQ8IUB3 73 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 LINC00308Q8TCZ7 52 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 S100A13Q99584 98 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 HILPDAQ9Y5L2 63 aa-1.19□□□□□ -2.6
CSDE1-210ENST00000525878 TMEM167BQ9NRX6 74 aa-1.2□□□□□ -2.6
CSDE1-210ENST00000525878 CCDC18Q5T9S5 1454 aa-1.2□□□□□ -2.6
CSDE1-210ENST00000525878 IQGAP1P46940 1657 aa-1.2□□□□□ -2.6
CSDE1-210ENST00000525878 DUOX2Q9NRD8 1548 aa-1.2□□□□□ -2.6
CSDE1-210ENST00000525878 M0R1W7 72 aa-1.21□□□□□ -2.6
CSDE1-210ENST00000525878 CLTCL1P53675 1640 aa-1.22□□□□□ -2.6
CSDE1-210ENST00000525878 LINC01549A6NIU2 74 aa-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms