RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 KRTAP3-3Q9BYR6 98 aa3.81□□□□□ -1.8
CHD7-203ENST00000525508 RYR1P21817 5038 aa3.79□□□□□ -1.8
CHD7-203ENST00000525508 KRTAP3-2Q9BYR7 98 aa3.78□□□□□ -1.8
CHD7-203ENST00000525508 DNAH10Q8IVF4 4471 aa3.76□□□□□ -1.81
CHD7-203ENST00000525508 DNAH8Q96JB1 4490 aa3.76□□□□□ -1.81
CHD7-203ENST00000525508 MYCBP2O75592 4640 aa3.74□□□□□ -1.81
CHD7-203ENST00000525508 DNAH1Q9P2D7 4330 aa3.73□□□□□ -1.81
CHD7-203ENST00000525508 LYSTQ99698 3801 aa3.72□□□□□ -1.81
CHD7-203ENST00000525508 LORP23490 312 aaPredicted RBP3.71□□□□□ -1.82
CHD7-203ENST00000525508 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
CHD7-203ENST00000525508 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
CHD7-203ENST00000525508 DYNC1H1Q14204 4646 aaKnown RBP3.68□□□□□ -1.82
CHD7-203ENST00000525508 STARD9Q9P2P6 4700 aa3.68□□□□□ -1.82
CHD7-203ENST00000525508 PRKDCP78527 4128 aaKnown RBP3.67□□□□□ -1.82
CHD7-203ENST00000525508 FAT3Q8TDW7 4589 aa3.66□□□□□ -1.82
CHD7-203ENST00000525508 LRP1BQ9NZR2 4599 aa3.65□□□□□ -1.82
CHD7-203ENST00000525508 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
CHD7-203ENST00000525508 DNAH17Q9UFH2 4485 aa3.61□□□□□ -1.83
CHD7-203ENST00000525508 SACSQ9NZJ4 4579 aa3.61□□□□□ -1.83
CHD7-203ENST00000525508 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
CHD7-203ENST00000525508 VPS13BQ7Z7G8 4022 aa3.6□□□□□ -1.83
CHD7-203ENST00000525508 KMT2AQ03164 3969 aa3.59□□□□□ -1.83
CHD7-203ENST00000525508 RYR3Q15413 4870 aa3.58□□□□□ -1.84
CHD7-203ENST00000525508 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
CHD7-203ENST00000525508 DNAH2Q9P225 4427 aa3.57□□□□□ -1.84
CHD7-203ENST00000525508 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
CHD7-203ENST00000525508 INE1O15225 51 aa3.56□□□□□ -1.84
CHD7-203ENST00000525508 LRP1Q07954 4544 aaKnown RBP3.54□□□□□ -1.84
CHD7-203ENST00000525508 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
CHD7-203ENST00000525508 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
CHD7-203ENST00000525508 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
CHD7-203ENST00000525508 ALMS1Q8TCU4 4167 aa3.52□□□□□ -1.85
CHD7-203ENST00000525508 APOBP04114 4563 aaKnown RBP3.51□□□□□ -1.85
CHD7-203ENST00000525508 ANK2Q01484 3957 aa3.5□□□□□ -1.85
CHD7-203ENST00000525508 KRTAP17-1Q9BYP8 105 aa3.44□□□□□ -1.86
CHD7-203ENST00000525508 LRP2P98164 4655 aa3.44□□□□□ -1.86
CHD7-203ENST00000525508 MT1HP80294 61 aa3.43□□□□□ -1.86
CHD7-203ENST00000525508 FAT2Q9NYQ8 4349 aa3.43□□□□□ -1.86
CHD7-203ENST00000525508 PCLOQ9Y6V0 5065 aa3.43□□□□□ -1.86
CHD7-203ENST00000525508 HERC2O95714 4834 aa3.42□□□□□ -1.86
CHD7-203ENST00000525508 MT2AP02795 61 aa3.4□□□□□ -1.87
CHD7-203ENST00000525508 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
CHD7-203ENST00000525508 DNAH6Q9C0G6 4158 aa3.38□□□□□ -1.87
CHD7-203ENST00000525508 DYNC2H1Q8NCM8 4307 aaKnown RBP3.38□□□□□ -1.87
CHD7-203ENST00000525508 FRAS1Q86XX4 4008 aa3.37□□□□□ -1.87
CHD7-203ENST00000525508 MT1FP04733 61 aa3.36□□□□□ -1.87
CHD7-203ENST00000525508 CMYA5Q8N3K9 4069 aa3.34□□□□□ -1.87
CHD7-203ENST00000525508 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.88
CHD7-203ENST00000525508 PKHD1P08F94 4074 aa3.31□□□□□ -1.88
CHD7-203ENST00000525508 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
CHD7-203ENST00000525508 DNAH7Q8WXX0 4024 aa3.3□□□□□ -1.88
CHD7-203ENST00000525508 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
CHD7-203ENST00000525508 DNAH3Q8TD57 4116 aa3.29□□□□□ -1.88
CHD7-203ENST00000525508 SPRR2GQ9BYE4 73 aa3.28□□□□□ -1.88
CHD7-203ENST00000525508 KMT2CQ8NEZ4 4911 aaKnown RBP3.27□□□□□ -1.89
CHD7-203ENST00000525508 RYR2Q92736 4967 aa3.25□□□□□ -1.89
CHD7-203ENST00000525508 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
CHD7-203ENST00000525508 EPPK1P58107 5090 aaKnown RBP3.22□□□□□ -1.89
CHD7-203ENST00000525508 LPAP08519 4548 aa3.21□□□□□ -1.9
CHD7-203ENST00000525508 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
CHD7-203ENST00000525508 HECTD4Q9Y4D8 3996 aa3.2□□□□□ -1.9
CHD7-203ENST00000525508 KRTAP19-1Q8IUB9 90 aa3.18□□□□□ -1.9
CHD7-203ENST00000525508 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
CHD7-203ENST00000525508 HSPG2P98160 4391 aa3.15□□□□□ -1.9
CHD7-203ENST00000525508 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.91
CHD7-203ENST00000525508 KRTAP10-7P60409 375 aaPredicted RBP3.15□□□□□ -1.91
CHD7-203ENST00000525508 BIRC6Q9NR09 4857 aa3.14□□□□□ -1.91
CHD7-203ENST00000525508 PKD1P98161 4303 aa3.12□□□□□ -1.91
CHD7-203ENST00000525508 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
CHD7-203ENST00000525508 HERC1Q15751 4861 aa3.1□□□□□ -1.91
CHD7-203ENST00000525508 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
CHD7-203ENST00000525508 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
CHD7-203ENST00000525508 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
CHD7-203ENST00000525508 RNF213Q63HN8 5207 aa3.07□□□□□ -1.92
CHD7-203ENST00000525508 KRTAP9-8Q9BYQ0 159 aa3.07□□□□□ -1.92
CHD7-203ENST00000525508 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
CHD7-203ENST00000525508 MT1XP80297 61 aa3.05□□□□□ -1.92
CHD7-203ENST00000525508 LCE2CQ5TA81 110 aa3.05□□□□□ -1.92
CHD7-203ENST00000525508 MT1BP07438 61 aa3.04□□□□□ -1.92
CHD7-203ENST00000525508 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
CHD7-203ENST00000525508 MUC2Q02817 5179 aa3□□□□□ -1.93
CHD7-203ENST00000525508 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
CHD7-203ENST00000525508 FAT4Q6V0I7 4981 aa2.96□□□□□ -1.94
CHD7-203ENST00000525508 MT1GP13640 62 aa2.96□□□□□ -1.94
CHD7-203ENST00000525508 SPRR2EP22531 72 aa2.96□□□□□ -1.94
CHD7-203ENST00000525508 SPRR2BP35325 72 aa2.96□□□□□ -1.94
CHD7-203ENST00000525508 SPRR2AP35326 72 aa2.96□□□□□ -1.94
CHD7-203ENST00000525508 LCE3BQ5TA77 95 aa2.94□□□□□ -1.94
CHD7-203ENST00000525508 MUC17Q685J3 4493 aa2.93□□□□□ -1.94
CHD7-203ENST00000525508 LCE2BO14633 110 aa2.92□□□□□ -1.94
CHD7-203ENST00000525508 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
CHD7-203ENST00000525508 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
CHD7-203ENST00000525508 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
CHD7-203ENST00000525508 LCE2DQ5TA82 110 aaPredicted RBP2.88□□□□□ -1.95
CHD7-203ENST00000525508 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
CHD7-203ENST00000525508 TNXBP22105 4242 aa2.84□□□□□ -1.95
CHD7-203ENST00000525508 PKHD1L1Q86WI1 4243 aa2.84□□□□□ -1.95
CHD7-203ENST00000525508 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.96
CHD7-203ENST00000525508 FLGP20930 4061 aaPredicted RBP2.84□□□□□ -1.96
CHD7-203ENST00000525508 SPRR2DP22532 72 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms