RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 C7orf33Q8WU49 177 aa3.06□□□□□ -1.92
CD44-218ENST00000525469 IGLV1-50A0A075B6I6 118 aa3.05□□□□□ -1.92
CD44-218ENST00000525469 A0A087WSZ3 146 aa3.05□□□□□ -1.92
CD44-218ENST00000525469 IGKV2-24A0A0C4DH68 120 aa3.05□□□□□ -1.92
CD44-218ENST00000525469 HRES1P13985 223 aa3.05□□□□□ -1.92
CD44-218ENST00000525469 KRTAP10-4P60372 401 aaPredicted RBP3.05□□□□□ -1.92
CD44-218ENST00000525469 A0A096LPF7 62 aa3.04□□□□□ -1.92
CD44-218ENST00000525469 DMAC1Q96GE9 116 aa3.04□□□□□ -1.92
CD44-218ENST00000525469 FAT3Q8TDW7 4589 aa3.03□□□□□ -1.92
CD44-218ENST00000525469 KRTAP4-16G5E9R7 235 aaPredicted RBP3.03□□□□□ -1.92
CD44-218ENST00000525469 CSAG1Q6PB30 78 aa3.03□□□□□ -1.92
CD44-218ENST00000525469 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
CD44-218ENST00000525469 IGLV10-54A0A075B6I4 117 aa3.02□□□□□ -1.93
CD44-218ENST00000525469 K7ERS5 55 aa3.02□□□□□ -1.93
CD44-218ENST00000525469 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
CD44-218ENST00000525469 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
CD44-218ENST00000525469 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
CD44-218ENST00000525469 LINC00472Q9H8W2 130 aa3.02□□□□□ -1.93
CD44-218ENST00000525469 CRCT1Q9UGL9 99 aa3.02□□□□□ -1.93
CD44-218ENST00000525469 MMP24-AS1A0A0U1RRL7 71 aa3.01□□□□□ -1.93
CD44-218ENST00000525469 SPRR1BP22528 89 aa3.01□□□□□ -1.93
CD44-218ENST00000525469 PCOTHQ58A44 107 aa3□□□□□ -1.93
CD44-218ENST00000525469 C15orf56Q8N910 161 aa2.99□□□□□ -1.93
CD44-218ENST00000525469 MRPL34Q9BQ48 92 aaKnown RBP2.99□□□□□ -1.93
CD44-218ENST00000525469 FAT4Q6V0I7 4981 aa2.99□□□□□ -1.93
CD44-218ENST00000525469 TNXBP22105 4242 aa2.99□□□□□ -1.93
CD44-218ENST00000525469 ZNF861PO60384 105 aa2.98□□□□□ -1.93
CD44-218ENST00000525469 C8orf17Q9NRJ1 99 aa2.98□□□□□ -1.93
CD44-218ENST00000525469 MUC2Q02817 5179 aa2.98□□□□□ -1.93
CD44-218ENST00000525469 IGLV7-43P04211 117 aa2.97□□□□□ -1.93
CD44-218ENST00000525469 A0A1B0GVX0 72 aa2.96□□□□□ -1.94
CD44-218ENST00000525469 KRTAP16-1A8MUX0 517 aa2.96□□□□□ -1.94
CD44-218ENST00000525469 DEFB116Q30KQ4 102 aa2.96□□□□□ -1.94
CD44-218ENST00000525469 LINC01556Q5JQF7 62 aa2.96□□□□□ -1.94
CD44-218ENST00000525469 ADM2Q7Z4H4 148 aa2.96□□□□□ -1.94
CD44-218ENST00000525469 ANAPC11Q9NYG5 84 aa2.96□□□□□ -1.94
CD44-218ENST00000525469 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
CD44-218ENST00000525469 PANO1I0J062 215 aa2.94□□□□□ -1.94
CD44-218ENST00000525469 C14orf177Q52M58 125 aa2.94□□□□□ -1.94
CD44-218ENST00000525469 DNAH8Q96JB1 4490 aa2.93□□□□□ -1.94
CD44-218ENST00000525469 CHTF8P0CG12 524 aa2.93□□□□□ -1.94
CD44-218ENST00000525469 LINC00483Q53H64 154 aa2.93□□□□□ -1.94
CD44-218ENST00000525469 A8MUU9 505 aa2.92□□□□□ -1.94
CD44-218ENST00000525469 KRTAP10-8P60410 259 aa2.92□□□□□ -1.94
CD44-218ENST00000525469 KRTAP26-1Q6PEX3 210 aa2.92□□□□□ -1.94
CD44-218ENST00000525469 LPAP08519 4548 aa2.9□□□□□ -1.94
CD44-218ENST00000525469 FAM168BA1KXE4 195 aa2.9□□□□□ -1.95
CD44-218ENST00000525469 SPINK6Q6UWN8 80 aa2.89□□□□□ -1.95
CD44-218ENST00000525469 COX6B2Q6YFQ2 88 aa2.88□□□□□ -1.95
CD44-218ENST00000525469 C20orf166-AS1Q96NR2 134 aa2.88□□□□□ -1.95
CD44-218ENST00000525469 Q5W150 140 aa2.87□□□□□ -1.95
CD44-218ENST00000525469 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
CD44-218ENST00000525469 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
CD44-218ENST00000525469 SPINT4Q6UDR6 99 aa2.86□□□□□ -1.95
CD44-218ENST00000525469 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
CD44-218ENST00000525469 Q96NJ1 140 aa2.85□□□□□ -1.95
CD44-218ENST00000525469 PSORS1C2Q9UIG4 136 aa2.85□□□□□ -1.95
CD44-218ENST00000525469 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
CD44-218ENST00000525469 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
CD44-218ENST00000525469 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
CD44-218ENST00000525469 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
CD44-218ENST00000525469 KRTAP11-1Q8IUC1 163 aa2.83□□□□□ -1.96
CD44-218ENST00000525469 SPACA4Q8TDM5 124 aa2.83□□□□□ -1.96
CD44-218ENST00000525469 A0A1B0GU33 70 aa2.82□□□□□ -1.96
CD44-218ENST00000525469 P0C880 135 aa2.82□□□□□ -1.96
CD44-218ENST00000525469 PRLHP81277 87 aa2.82□□□□□ -1.96
CD44-218ENST00000525469 SSBP3-AS1Q7Z2R9 100 aa2.81□□□□□ -1.96
CD44-218ENST00000525469 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
CD44-218ENST00000525469 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
CD44-218ENST00000525469 H1FX-AS1Q4G0G2 97 aa2.78□□□□□ -1.96
CD44-218ENST00000525469 KRTAP7-1Q8IUC3 87 aa2.78□□□□□ -1.96
CD44-218ENST00000525469 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
CD44-218ENST00000525469 KRTAP13-1Q8IUC0 172 aa2.77□□□□□ -1.97
CD44-218ENST00000525469 H0YAA0 97 aa2.76□□□□□ -1.97
CD44-218ENST00000525469 A0A096LNI7 61 aa2.75□□□□□ -1.97
CD44-218ENST00000525469 A0A0G2JQZ4 141 aa2.75□□□□□ -1.97
CD44-218ENST00000525469 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
CD44-218ENST00000525469 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
CD44-218ENST00000525469 RPL37P61927 97 aaKnown RBP2.75□□□□□ -1.97
CD44-218ENST00000525469 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
CD44-218ENST00000525469 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
CD44-218ENST00000525469 TPRXLQ17RH7 258 aa2.71□□□□□ -1.98
CD44-218ENST00000525469 KRTAP1-4P0C5Y4 121 aa2.68□□□□□ -1.98
CD44-218ENST00000525469 TYMSOSQ8TAI1 123 aa2.68□□□□□ -1.98
CD44-218ENST00000525469 M0R2T5 61 aa2.67□□□□□ -1.98
CD44-218ENST00000525469 SPINK1P00995 79 aa2.67□□□□□ -1.98
CD44-218ENST00000525469 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
CD44-218ENST00000525469 RPS29P62273 56 aaKnown RBP2.64□□□□□ -1.99
CD44-218ENST00000525469 MT1HP80294 61 aa2.64□□□□□ -1.99
CD44-218ENST00000525469 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
CD44-218ENST00000525469 KRTAP4-1Q9BYQ7 146 aa2.63□□□□□ -1.99
CD44-218ENST00000525469 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
CD44-218ENST00000525469 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
CD44-218ENST00000525469 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
CD44-218ENST00000525469 PP632Q6XCG6 107 aa2.57□□□□□ -2
CD44-218ENST00000525469 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
CD44-218ENST00000525469 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
CD44-218ENST00000525469 M0QZ58 72 aa2.55□□□□□ -2
CD44-218ENST00000525469 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
CD44-218ENST00000525469 S4R3F8 94 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms