RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 KRTAP6-2Q3LI66 62 aa0.2□□□□□ -2.38
USP47-206ENST00000525367 TRIOO75962 3097 aa0.2□□□□□ -2.38
USP47-206ENST00000525367 STAB1Q9NY15 2570 aa0.2□□□□□ -2.38
USP47-206ENST00000525367 RANBP2P49792 3224 aaKnown RBP0.2□□□□□ -2.38
USP47-206ENST00000525367 LYSTQ99698 3801 aa0.2□□□□□ -2.38
USP47-206ENST00000525367 USP9XQ93008 2570 aaPredicted RBP0.19□□□□□ -2.38
USP47-206ENST00000525367 KALRNO60229 2985 aa0.19□□□□□ -2.38
USP47-206ENST00000525367 SPRR2EP22531 72 aa0.19□□□□□ -2.38
USP47-206ENST00000525367 DEFB124Q8NES8 71 aa0.19□□□□□ -2.38
USP47-206ENST00000525367 Q9Y3F1 56 aa0.19□□□□□ -2.38
USP47-206ENST00000525367 TGP01266 2768 aa0.19□□□□□ -2.38
USP47-206ENST00000525367 MYO18BQ8IUG5 2567 aa0.19□□□□□ -2.38
USP47-206ENST00000525367 TLN2Q9Y4G6 2542 aa0.19□□□□□ -2.38
USP47-206ENST00000525367 SYNE2Q8WXH0 6885 aaKnown RBP0.18□□□□□ -2.38
USP47-206ENST00000525367 COL6A3P12111 3177 aa0.18□□□□□ -2.38
USP47-206ENST00000525367 SMR3BP02814 79 aaPredicted RBP0.18□□□□□ -2.38
USP47-206ENST00000525367 APELAP0DMC3 54 aa0.18□□□□□ -2.38
USP47-206ENST00000525367 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
USP47-206ENST00000525367 FSIP2Q5CZC0 6907 aa0.18□□□□□ -2.38
USP47-206ENST00000525367 PDZD2O15018 2839 aa0.18□□□□□ -2.38
USP47-206ENST00000525367 ZANQ9Y493 2812 aa0.18□□□□□ -2.38
USP47-206ENST00000525367 CRYBG3Q68DQ2 2970 aa0.18□□□□□ -2.38
USP47-206ENST00000525367 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
USP47-206ENST00000525367 HIVEP1P15822 2718 aa0.17□□□□□ -2.38
USP47-206ENST00000525367 CELSR3Q9NYQ7 3312 aa0.17□□□□□ -2.38
USP47-206ENST00000525367 RPS29P62273 56 aaKnown RBP0.17□□□□□ -2.38
USP47-206ENST00000525367 SPTAN1Q13813 2472 aaKnown RBP0.17□□□□□ -2.38
USP47-206ENST00000525367 DOPEY1Q5JWR5 2465 aa0.17□□□□□ -2.38
USP47-206ENST00000525367 ADGRG4Q8IZF6 3080 aa0.17□□□□□ -2.38
USP47-206ENST00000525367 CUBNO60494 3623 aa0.17□□□□□ -2.38
USP47-206ENST00000525367 NBEAL1Q6ZS30 2694 aa0.17□□□□□ -2.38
USP47-206ENST00000525367 TEP1Q99973 2627 aaKnown RBP0.17□□□□□ -2.38
USP47-206ENST00000525367 DMXL2Q8TDJ6 3036 aa0.16□□□□□ -2.38
USP47-206ENST00000525367 MGAQ8IWI9 3026 aa0.16□□□□□ -2.38
USP47-206ENST00000525367 USP9YO00507 2555 aaPredicted RBP0.15□□□□□ -2.38
USP47-206ENST00000525367 CFAP54Q96N23 3096 aa0.15□□□□□ -2.38
USP47-206ENST00000525367 SPTBN5Q9NRC6 3674 aaKnown RBP0.15□□□□□ -2.38
USP47-206ENST00000525367 KRTAP19-5Q3LI72 72 aa0.15□□□□□ -2.39
USP47-206ENST00000525367 MXRA5Q9NR99 2828 aa0.15□□□□□ -2.39
USP47-206ENST00000525367 WDR87Q6ZQQ6 2873 aa0.15□□□□□ -2.39
USP47-206ENST00000525367 LAMA1P25391 3075 aa0.15□□□□□ -2.39
USP47-206ENST00000525367 ITPR1Q14643 2758 aa0.14□□□□□ -2.39
USP47-206ENST00000525367 MT1HP80294 61 aa0.14□□□□□ -2.39
USP47-206ENST00000525367 TEX15Q9BXT5 2789 aa0.14□□□□□ -2.39
USP47-206ENST00000525367 ITPR3Q14573 2671 aa0.13□□□□□ -2.39
USP47-206ENST00000525367 SVEP1Q4LDE5 3571 aa0.13□□□□□ -2.39
USP47-206ENST00000525367 FLGP20930 4061 aaPredicted RBP0.13□□□□□ -2.39
USP47-206ENST00000525367 MT1EP04732 61 aa0.13□□□□□ -2.39
USP47-206ENST00000525367 LINC01556Q5JQF7 62 aa0.13□□□□□ -2.39
USP47-206ENST00000525367 ZFHX4Q86UP3 3567 aa0.12□□□□□ -2.39
USP47-206ENST00000525367 ATMQ13315 3056 aa0.12□□□□□ -2.39
USP47-206ENST00000525367 PRUNE2Q8WUY3 3088 aa0.12□□□□□ -2.39
USP47-206ENST00000525367 LRBAP50851 2863 aa0.12□□□□□ -2.39
USP47-206ENST00000525367 A0A096LPF7 62 aa0.12□□□□□ -2.39
USP47-206ENST00000525367 DEFB4AO15263 64 aa0.12□□□□□ -2.39
USP47-206ENST00000525367 AKAP9Q99996 3911 aa0.12□□□□□ -2.39
USP47-206ENST00000525367 RELNP78509 3460 aa0.11□□□□□ -2.39
USP47-206ENST00000525367 LRP2P98164 4655 aa0.11□□□□□ -2.39
USP47-206ENST00000525367 DEFB108BQ8NET1 73 aa0.11□□□□□ -2.39
USP47-206ENST00000525367 MT1LQ93083 61 aa0.11□□□□□ -2.39
USP47-206ENST00000525367 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
USP47-206ENST00000525367 CFAP46Q8IYW2 2715 aa0.11□□□□□ -2.39
USP47-206ENST00000525367 LAMA5O15230 3695 aa0.11□□□□□ -2.39
USP47-206ENST00000525367 SPENQ96T58 3664 aaKnown RBP0.11□□□□□ -2.39
USP47-206ENST00000525367 SRCAPQ6ZRS2 3230 aa0.11□□□□□ -2.39
USP47-206ENST00000525367 FRYLO94915 3013 aa0.11□□□□□ -2.39
USP47-206ENST00000525367 LAMA3Q16787 3333 aa0.1□□□□□ -2.39
USP47-206ENST00000525367 MYO9AB2RTY4 2548 aa0.1□□□□□ -2.39
USP47-206ENST00000525367 C5orf42Q9H799 3197 aa0.1□□□□□ -2.39
USP47-206ENST00000525367 CSMD1Q96PZ7 3565 aa0.1□□□□□ -2.39
USP47-206ENST00000525367 DNAH12Q6ZR08 3092 aa0.1□□□□□ -2.39
USP47-206ENST00000525367 VPS13BQ7Z7G8 4022 aa0.1□□□□□ -2.39
USP47-206ENST00000525367 MKI67P46013 3256 aaKnown RBP0.09□□□□□ -2.39
USP47-206ENST00000525367 LRP1BQ9NZR2 4599 aa0.09□□□□□ -2.39
USP47-206ENST00000525367 KRTAP19-7Q3SYF9 63 aa0.09□□□□□ -2.4
USP47-206ENST00000525367 COX14Q96I36 57 aa0.09□□□□□ -2.4
USP47-206ENST00000525367 SSPOA2VEC9 5147 aa0.09□□□□□ -2.4
USP47-206ENST00000525367 LAMA2P24043 3122 aaKnown RBP0.09□□□□□ -2.4
USP47-206ENST00000525367 PKD1P98161 4303 aa0.09□□□□□ -2.4
USP47-206ENST00000525367 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
USP47-206ENST00000525367 TLN1Q9Y490 2541 aaKnown RBP0.08□□□□□ -2.4
USP47-206ENST00000525367 MT1XP80297 61 aa0.08□□□□□ -2.4
USP47-206ENST00000525367 DNAH3Q8TD57 4116 aa0.08□□□□□ -2.4
USP47-206ENST00000525367 ANK3Q12955 4377 aaKnown RBP0.08□□□□□ -2.4
USP47-206ENST00000525367 SACSQ9NZJ4 4579 aa0.08□□□□□ -2.4
USP47-206ENST00000525367 ITPR2Q14571 2701 aa0.07□□□□□ -2.4
USP47-206ENST00000525367 CEP295Q9C0D2 2601 aa0.07□□□□□ -2.4
USP47-206ENST00000525367 NIPBLQ6KC79 2804 aaeCLIP0.07□□□□□ -2.4
USP47-206ENST00000525367 STATHP02808 62 aa0.07□□□□□ -2.4
USP47-206ENST00000525367 HTN3P15516 51 aa0.07□□□□□ -2.4
USP47-206ENST00000525367 KRTAP19-8Q3LI54 63 aa0.07□□□□□ -2.4
USP47-206ENST00000525367 DNAH11Q96DT5 4516 aa0.07□□□□□ -2.4
USP47-206ENST00000525367 SZT2Q5T011 3432 aa0.07□□□□□ -2.4
USP47-206ENST00000525367 FREM2Q5SZK8 3169 aa0.06□□□□□ -2.4
USP47-206ENST00000525367 NBPF19A0A087WUL8 3843 aa0.06□□□□□ -2.4
USP47-206ENST00000525367 DNAH9Q9NYC9 4486 aa0.06□□□□□ -2.4
USP47-206ENST00000525367 DYNC2H1Q8NCM8 4307 aaKnown RBP0.06□□□□□ -2.4
USP47-206ENST00000525367 DSTQ03001 7570 aaKnown RBP0.06□□□□□ -2.4
USP47-206ENST00000525367 FAT1Q14517 4588 aa0.06□□□□□ -2.4
USP47-206ENST00000525367 DNAH2Q9P225 4427 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms