RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 DMBT1Q9UGM3 2413 aaPredicted RBP1.88□□□□□ -2.11
CD44-213ENST00000525209 A0A096LPF7 62 aa1.88□□□□□ -2.11
CD44-213ENST00000525209 SPINK9Q5DT21 86 aa1.88□□□□□ -2.11
CD44-213ENST00000525209 TMEM167AQ8TBQ9 72 aa1.88□□□□□ -2.11
CD44-213ENST00000525209 DNAH1Q9P2D7 4330 aa1.87□□□□□ -2.11
CD44-213ENST00000525209 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
CD44-213ENST00000525209 ARHGAP5-AS1Q96IT6 56 aa1.87□□□□□ -2.11
CD44-213ENST00000525209 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
CD44-213ENST00000525209 KMT2AQ03164 3969 aa1.86□□□□□ -2.11
CD44-213ENST00000525209 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
CD44-213ENST00000525209 LCE3AQ5TA76 89 aa1.86□□□□□ -2.11
CD44-213ENST00000525209 DEFB104AQ8WTQ1 72 aa1.86□□□□□ -2.11
CD44-213ENST00000525209 I3L2K1 104 aa1.85□□□□□ -2.11
CD44-213ENST00000525209 DEFB1P60022 68 aa1.85□□□□□ -2.11
CD44-213ENST00000525209 NOP10Q9NPE3 64 aaKnown RBP1.85□□□□□ -2.11
CD44-213ENST00000525209 HERC2O95714 4834 aa1.85□□□□□ -2.11
CD44-213ENST00000525209 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.11
CD44-213ENST00000525209 LINC01546A6NGU7 62 aa1.84□□□□□ -2.11
CD44-213ENST00000525209 TP53AIP1Q9HCN2 124 aa1.84□□□□□ -2.11
CD44-213ENST00000525209 CRIPTQ9P021 101 aa1.84□□□□□ -2.11
CD44-213ENST00000525209 TIMM8BQ9Y5J9 83 aaPredicted RBP1.83□□□□□ -2.12
CD44-213ENST00000525209 CRIP1P50238 77 aa1.82□□□□□ -2.12
CD44-213ENST00000525209 PRCDQ00LT1 54 aa1.82□□□□□ -2.12
CD44-213ENST00000525209 WT1-ASQ06250 92 aa1.82□□□□□ -2.12
CD44-213ENST00000525209 K7EIM0 57 aa1.81□□□□□ -2.12
CD44-213ENST00000525209 K7EQZ3 153 aa1.81□□□□□ -2.12
CD44-213ENST00000525209 PLECQ15149 4684 aaKnown RBP1.81□□□□□ -2.12
CD44-213ENST00000525209 PKHD1P08F94 4074 aa1.8□□□□□ -2.12
CD44-213ENST00000525209 UBR4Q5T4S7 5183 aa1.8□□□□□ -2.12
CD44-213ENST00000525209 H0YGX0 51 aa1.8□□□□□ -2.12
CD44-213ENST00000525209 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
CD44-213ENST00000525209 MRPL34Q9BQ48 92 aaKnown RBP1.8□□□□□ -2.12
CD44-213ENST00000525209 DNAH10Q8IVF4 4471 aa1.79□□□□□ -2.12
CD44-213ENST00000525209 WFDC10BQ8IUB3 73 aa1.79□□□□□ -2.12
CD44-213ENST00000525209 IAPPP10997 89 aa1.78□□□□□ -2.12
CD44-213ENST00000525209 CNFNQ9BYD5 112 aa1.78□□□□□ -2.12
CD44-213ENST00000525209 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
CD44-213ENST00000525209 COX6B2Q6YFQ2 88 aa1.77□□□□□ -2.13
CD44-213ENST00000525209 CDKN2A-AS1Q9UH64 79 aa1.77□□□□□ -2.13
CD44-213ENST00000525209 PRO0255Q9UI72 69 aa1.77□□□□□ -2.13
CD44-213ENST00000525209 HERC1Q15751 4861 aa1.77□□□□□ -2.13
CD44-213ENST00000525209 VPS13DQ5THJ4 4388 aa1.77□□□□□ -2.13
CD44-213ENST00000525209 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
CD44-213ENST00000525209 PKD1P98161 4303 aa1.76□□□□□ -2.13
CD44-213ENST00000525209 HSPG2P98160 4391 aa1.76□□□□□ -2.13
CD44-213ENST00000525209 DNAH6Q9C0G6 4158 aa1.75□□□□□ -2.13
CD44-213ENST00000525209 SPINK4O60575 86 aa1.75□□□□□ -2.13
CD44-213ENST00000525209 LINC00158P58513 81 aa1.75□□□□□ -2.13
CD44-213ENST00000525209 COX6A2Q02221 97 aa1.75□□□□□ -2.13
CD44-213ENST00000525209 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
CD44-213ENST00000525209 Q8IZM0 81 aa1.75□□□□□ -2.13
CD44-213ENST00000525209 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
CD44-213ENST00000525209 DNAH2Q9P225 4427 aa1.74□□□□□ -2.13
CD44-213ENST00000525209 CLPSL2Q6UWE3 100 aa1.74□□□□□ -2.13
CD44-213ENST00000525209 RNF213Q63HN8 5207 aa1.73□□□□□ -2.13
CD44-213ENST00000525209 H3BNG1 76 aa1.73□□□□□ -2.13
CD44-213ENST00000525209 FAT2Q9NYQ8 4349 aa1.72□□□□□ -2.13
CD44-213ENST00000525209 KLK9Q2XQG4 91 aa1.72□□□□□ -2.13
CD44-213ENST00000525209 VPS13BQ7Z7G8 4022 aa1.71□□□□□ -2.14
CD44-213ENST00000525209 LINC01556Q5JQF7 62 aa1.71□□□□□ -2.14
CD44-213ENST00000525209 LELP1Q5T871 98 aa1.71□□□□□ -2.14
CD44-213ENST00000525209 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
CD44-213ENST00000525209 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
CD44-213ENST00000525209 TMEM167BQ9NRX6 74 aa1.7□□□□□ -2.14
CD44-213ENST00000525209 FSIP2Q5CZC0 6907 aa1.7□□□□□ -2.14
CD44-213ENST00000525209 DYNC1H1Q14204 4646 aaKnown RBP1.7□□□□□ -2.14
CD44-213ENST00000525209 H0YAA0 97 aa1.69□□□□□ -2.14
CD44-213ENST00000525209 APOBP04114 4563 aaKnown RBP1.69□□□□□ -2.14
CD44-213ENST00000525209 DNAH11Q96DT5 4516 aa1.69□□□□□ -2.14
CD44-213ENST00000525209 MYCBP2O75592 4640 aa1.68□□□□□ -2.14
CD44-213ENST00000525209 SPINK6Q6UWN8 80 aa1.68□□□□□ -2.14
CD44-213ENST00000525209 Q6ZSA8 131 aa1.68□□□□□ -2.14
CD44-213ENST00000525209 LINC00308Q8TCZ7 52 aa1.68□□□□□ -2.14
CD44-213ENST00000525209 LRP1BQ9NZR2 4599 aa1.67□□□□□ -2.14
CD44-213ENST00000525209 MT1HL1P0DM35 61 aa1.67□□□□□ -2.14
CD44-213ENST00000525209 A8MTW9 85 aa1.66□□□□□ -2.14
CD44-213ENST00000525209 DNAH5Q8TE73 4624 aa1.65□□□□□ -2.14
CD44-213ENST00000525209 M0R2T5 61 aa1.65□□□□□ -2.15
CD44-213ENST00000525209 SPRR1AP35321 89 aa1.65□□□□□ -2.15
CD44-213ENST00000525209 KRTAP10-4P60372 401 aaPredicted RBP1.64□□□□□ -2.15
CD44-213ENST00000525209 CRCT1Q9UGL9 99 aa1.64□□□□□ -2.15
CD44-213ENST00000525209 FAT1Q14517 4588 aa1.64□□□□□ -2.15
CD44-213ENST00000525209 A0A096LNI7 61 aa1.63□□□□□ -2.15
CD44-213ENST00000525209 A0A0D9SG42 100 aa1.63□□□□□ -2.15
CD44-213ENST00000525209 LRP1Q07954 4544 aaKnown RBP1.62□□□□□ -2.15
CD44-213ENST00000525209 FAT3Q8TDW7 4589 aa1.61□□□□□ -2.15
CD44-213ENST00000525209 HMCN2Q8NDA2 5059 aa1.61□□□□□ -2.15
CD44-213ENST00000525209 H1FX-AS1Q4G0G2 97 aa1.61□□□□□ -2.15
CD44-213ENST00000525209 C6orf48Q9UBA6 75 aa1.6□□□□□ -2.15
CD44-213ENST00000525209 LRP2P98164 4655 aa1.6□□□□□ -2.15
CD44-213ENST00000525209 LCE1CQ5T751 118 aa1.59□□□□□ -2.15
CD44-213ENST00000525209 LCE1BQ5T7P3 118 aa1.59□□□□□ -2.15
CD44-213ENST00000525209 DEFB105AQ8NG35 78 aa1.59□□□□□ -2.15
CD44-213ENST00000525209 LPAP08519 4548 aa1.58□□□□□ -2.16
CD44-213ENST00000525209 PKHD1L1Q86WI1 4243 aa1.58□□□□□ -2.16
CD44-213ENST00000525209 SPRR1BP22528 89 aa1.58□□□□□ -2.16
CD44-213ENST00000525209 WFDC13Q8IUB5 93 aa1.58□□□□□ -2.16
CD44-213ENST00000525209 SMIM2Q9BVW6 85 aa1.58□□□□□ -2.16
CD44-213ENST00000525209 TOMM7Q9P0U1 55 aa1.58□□□□□ -2.16
CD44-213ENST00000525209 NDUFA1O15239 70 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms