RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 ETDBQ3ZM63 59 aa0.98□□□□□ -2.25
CSMD1-214ENST00000524177 SPAG11AQ6PDA7 123 aa0.98□□□□□ -2.25
CSMD1-214ENST00000524177 C20orf197Q8N268 126 aa0.98□□□□□ -2.25
CSMD1-214ENST00000524177 TOMM5Q8N4H5 51 aa0.98□□□□□ -2.25
CSMD1-214ENST00000524177 COX7B2Q8TF08 81 aa0.98□□□□□ -2.25
CSMD1-214ENST00000524177 SYNE2Q8WXH0 6885 aaKnown RBP0.97□□□□□ -2.25
CSMD1-214ENST00000524177 TRAV22A0A0B4J277 110 aa0.97□□□□□ -2.25
CSMD1-214ENST00000524177 ARMS2P0C7Q2 107 aa0.97□□□□□ -2.25
CSMD1-214ENST00000524177 IGLC3P0DOY3 106 aa0.97□□□□□ -2.25
CSMD1-214ENST00000524177 BVES-AS1Q5T3Y7 98 aa0.97□□□□□ -2.25
CSMD1-214ENST00000524177 LINC00643Q86TS7 51 aa0.97□□□□□ -2.25
CSMD1-214ENST00000524177 NMES1Q9C002 83 aa0.97□□□□□ -2.25
CSMD1-214ENST00000524177 CDC42SE2Q9NRR3 84 aa0.97□□□□□ -2.25
CSMD1-214ENST00000524177 V9GYV3 84 aa0.97□□□□□ -2.25
CSMD1-214ENST00000524177 H3BUT2 72 aa0.96□□□□□ -2.26
CSMD1-214ENST00000524177 COX17Q14061 63 aa0.96□□□□□ -2.26
CSMD1-214ENST00000524177 Q5VV11 94 aa0.96□□□□□ -2.26
CSMD1-214ENST00000524177 BAGE3Q86Y29 109 aa0.96□□□□□ -2.26
CSMD1-214ENST00000524177 TMEM167BQ9NRX6 74 aa0.96□□□□□ -2.26
CSMD1-214ENST00000524177 ARL2-SNX15V9GYD0 113 aa0.96□□□□□ -2.26
CSMD1-214ENST00000524177 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
CSMD1-214ENST00000524177 CTXND1A0A1B0GTU2 59 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 LOC101927531A0A1B0GV80 90 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 UMAD1C9J7I0 102 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 F8VRH5 84 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 M0QY20 66 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 UQCR11O14957 56 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 MGPP08493 103 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 GCHFRP30047 84 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 CRIP1P50238 77 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 MT1HP80294 61 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 KRTAP19-2Q3LHN2 52 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 Q6ZQY7 126 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 BAGE2Q86Y30 109 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 C18orf32Q8TCD1 76 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 HIGD1BQ9P298 99 aa0.95□□□□□ -2.26
CSMD1-214ENST00000524177 FLGP20930 4061 aaPredicted RBP0.94□□□□□ -2.26
CSMD1-214ENST00000524177 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.94□□□□□ -2.26
CSMD1-214ENST00000524177 MYMXA0A1B0GTQ4 84 aa0.94□□□□□ -2.26
CSMD1-214ENST00000524177 LINC00959A0A1B0GUT2 108 aa0.94□□□□□ -2.26
CSMD1-214ENST00000524177 F8WEM9 126 aa0.94□□□□□ -2.26
CSMD1-214ENST00000524177 LEPROTL1O95214 131 aa0.94□□□□□ -2.26
CSMD1-214ENST00000524177 SMIM13P0DJ93 91 aa0.94□□□□□ -2.26
CSMD1-214ENST00000524177 ATP5EP2Q5VTU8 51 aa0.94□□□□□ -2.26
CSMD1-214ENST00000524177 SFTA2Q6UW10 78 aa0.94□□□□□ -2.26
CSMD1-214ENST00000524177 CNFNQ9BYD5 112 aa0.94□□□□□ -2.26
CSMD1-214ENST00000524177 TRBV30A0A0K0K1B3 111 aa0.93□□□□□ -2.26
CSMD1-214ENST00000524177 C7orf77A4D0Y5 90 aa0.93□□□□□ -2.26
CSMD1-214ENST00000524177 D6R8Y8 96 aa0.93□□□□□ -2.26
CSMD1-214ENST00000524177 NDUFA1O15239 70 aa0.93□□□□□ -2.26
CSMD1-214ENST00000524177 SERF2P84101 59 aa0.93□□□□□ -2.26
CSMD1-214ENST00000524177 MUSTN1Q8IVN3 82 aa0.93□□□□□ -2.26
CSMD1-214ENST00000524177 NEBP20929 6669 aa0.93□□□□□ -2.26
CSMD1-214ENST00000524177 NCR3O14931 201 aa0.92□□□□□ -2.26
CSMD1-214ENST00000524177 RPS29P62273 56 aaKnown RBP0.92□□□□□ -2.26
CSMD1-214ENST00000524177 Q5BKY6 102 aa0.92□□□□□ -2.26
CSMD1-214ENST00000524177 RPL39LQ96EH5 51 aaKnown RBP0.92□□□□□ -2.26
CSMD1-214ENST00000524177 PRR15LQ9BU68 103 aa0.92□□□□□ -2.26
CSMD1-214ENST00000524177 C6orf48Q9UBA6 75 aa0.92□□□□□ -2.26
CSMD1-214ENST00000524177 UBE2D4Q9Y2X8 147 aa0.92□□□□□ -2.26
CSMD1-214ENST00000524177 LINC01558Q9Y6Z2 57 aa0.92□□□□□ -2.26
CSMD1-214ENST00000524177 I3L3M4 83 aa0.91□□□□□ -2.26
CSMD1-214ENST00000524177 M0R2T5 61 aa0.91□□□□□ -2.26
CSMD1-214ENST00000524177 ACYP2P14621 99 aa0.91□□□□□ -2.26
CSMD1-214ENST00000524177 Q6JHZ5 121 aa0.91□□□□□ -2.26
CSMD1-214ENST00000524177 LINC00575Q6W349 94 aa0.91□□□□□ -2.26
CSMD1-214ENST00000524177 LINC00846Q9NV44 126 aa0.91□□□□□ -2.26
CSMD1-214ENST00000524177 SPINK1P00995 79 aa0.9□□□□□ -2.27
CSMD1-214ENST00000524177 POLR2KP53803 58 aaKnown RBP0.9□□□□□ -2.27
CSMD1-214ENST00000524177 PRLHP81277 87 aa0.9□□□□□ -2.27
CSMD1-214ENST00000524177 Q8IZM0 81 aa0.9□□□□□ -2.27
CSMD1-214ENST00000524177 SMIM11BQ8TCY0 68 aa0.9□□□□□ -2.27
CSMD1-214ENST00000524177 LINC00208Q96KT6 92 aa0.9□□□□□ -2.27
CSMD1-214ENST00000524177 SSPOA2VEC9 5147 aa0.9□□□□□ -2.27
CSMD1-214ENST00000524177 A0A1B0GUT8 65 aa0.89□□□□□ -2.27
CSMD1-214ENST00000524177 H0Y9P7 68 aa0.89□□□□□ -2.27
CSMD1-214ENST00000524177 NDUFB1O75438 58 aa0.89□□□□□ -2.27
CSMD1-214ENST00000524177 FCER1GP30273 86 aa0.89□□□□□ -2.27
CSMD1-214ENST00000524177 IFI27P40305 119 aaPredicted RBP0.89□□□□□ -2.27
CSMD1-214ENST00000524177 COX6B2Q6YFQ2 88 aa0.89□□□□□ -2.27
CSMD1-214ENST00000524177 SPRR4Q96PI1 79 aa0.89□□□□□ -2.27
CSMD1-214ENST00000524177 USH2AO75445 5202 aa0.88□□□□□ -2.27
CSMD1-214ENST00000524177 A0A087WVE0 104 aa0.88□□□□□ -2.27
CSMD1-214ENST00000524177 RPL39P62891 51 aaKnown RBP0.88□□□□□ -2.27
CSMD1-214ENST00000524177 Q96NJ1 140 aa0.88□□□□□ -2.27
CSMD1-214ENST00000524177 SMIM2Q9BVW6 85 aa0.88□□□□□ -2.27
CSMD1-214ENST00000524177 TOMM7Q9P0U1 55 aa0.88□□□□□ -2.27
CSMD1-214ENST00000524177 GNG13Q9P2W3 67 aa0.88□□□□□ -2.27
CSMD1-214ENST00000524177 FXYD6-FXYD2A0A087WZ82 144 aa0.87□□□□□ -2.27
CSMD1-214ENST00000524177 COX8AP10176 69 aa0.87□□□□□ -2.27
CSMD1-214ENST00000524177 RPL37P61927 97 aaKnown RBP0.87□□□□□ -2.27
CSMD1-214ENST00000524177 KRTAP19-6Q3LI70 58 aa0.87□□□□□ -2.27
CSMD1-214ENST00000524177 SSBP3-AS1Q7Z2R9 100 aa0.87□□□□□ -2.27
CSMD1-214ENST00000524177 TRBV7-4A0A0J9YYF1 115 aa0.86□□□□□ -2.27
CSMD1-214ENST00000524177 MT2AP02795 61 aa0.86□□□□□ -2.27
CSMD1-214ENST00000524177 MT1FP04733 61 aa0.86□□□□□ -2.27
CSMD1-214ENST00000524177 SPRR1AP35321 89 aa0.86□□□□□ -2.27
CSMD1-214ENST00000524177 ATXN8Q156A1 80 aa0.86□□□□□ -2.27
CSMD1-214ENST00000524177 KRTAP20-1Q3LI63 56 aa0.86□□□□□ -2.27
CSMD1-214ENST00000524177 PLAC4Q8WY50 150 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms