RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 DSCR8Q96T75 97 aa1.87□□□□□ -2.11
NPM1-210ENST00000523339 K7EQZ3 153 aa1.86□□□□□ -2.11
NPM1-210ENST00000523339 IGKV4-1P06312 121 aa1.86□□□□□ -2.11
NPM1-210ENST00000523339 LCE3AQ5TA76 89 aa1.86□□□□□ -2.11
NPM1-210ENST00000523339 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
NPM1-210ENST00000523339 A0A087WVE0 104 aa1.85□□□□□ -2.11
NPM1-210ENST00000523339 MMP24-AS1A0A0U1RRL7 71 aa1.85□□□□□ -2.11
NPM1-210ENST00000523339 A8MWP4 228 aa1.85□□□□□ -2.11
NPM1-210ENST00000523339 PDE6GP18545 87 aa1.85□□□□□ -2.11
NPM1-210ENST00000523339 SNCGO76070 127 aa1.84□□□□□ -2.11
NPM1-210ENST00000523339 SPRR2EP22531 72 aa1.84□□□□□ -2.11
NPM1-210ENST00000523339 SPRR2BP35325 72 aa1.84□□□□□ -2.11
NPM1-210ENST00000523339 SPRR2AP35326 72 aa1.84□□□□□ -2.11
NPM1-210ENST00000523339 A0A1B0GVX0 72 aa1.83□□□□□ -2.12
NPM1-210ENST00000523339 HIST1H4AP62805 103 aaKnown RBP1.83□□□□□ -2.12
NPM1-210ENST00000523339 PRR15Q8IV56 129 aa1.83□□□□□ -2.12
NPM1-210ENST00000523339 IMUPQ9GZP8 106 aa1.83□□□□□ -2.12
NPM1-210ENST00000523339 A0A1B0GW54 56 aa1.82□□□□□ -2.12
NPM1-210ENST00000523339 NREPQ16612 68 aa1.82□□□□□ -2.12
NPM1-210ENST00000523339 LINC00643Q86TS7 51 aa1.82□□□□□ -2.12
NPM1-210ENST00000523339 SIGMAR1Q99720 223 aa1.82□□□□□ -2.12
NPM1-210ENST00000523339 C8orf17Q9NRJ1 99 aa1.82□□□□□ -2.12
NPM1-210ENST00000523339 IGHV6-1A0A0B4J1U7 121 aa1.81□□□□□ -2.12
NPM1-210ENST00000523339 A8MUU9 505 aa1.81□□□□□ -2.12
NPM1-210ENST00000523339 K7ERU9 68 aa1.81□□□□□ -2.12
NPM1-210ENST00000523339 ACYP1P07311 99 aa1.81□□□□□ -2.12
NPM1-210ENST00000523339 CXCL6P80162 114 aa1.81□□□□□ -2.12
NPM1-210ENST00000523339 Q5W150 140 aa1.81□□□□□ -2.12
NPM1-210ENST00000523339 SPRR2FQ96RM1 72 aa1.81□□□□□ -2.12
NPM1-210ENST00000523339 WFDC13Q8IUB5 93 aa1.8□□□□□ -2.12
NPM1-210ENST00000523339 UBL5Q9BZL1 73 aa1.8□□□□□ -2.12
NPM1-210ENST00000523339 SS18L2Q9UHA2 77 aa1.8□□□□□ -2.12
NPM1-210ENST00000523339 SPRR2DP22532 72 aa1.79□□□□□ -2.12
NPM1-210ENST00000523339 OCR1Q9BZK8 76 aa1.79□□□□□ -2.12
NPM1-210ENST00000523339 FAM236AA0A1B0GUQ0 79 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 FAM236BA0A1B0GV22 79 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 HCG22E2RYF7 251 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 J3KT08 172 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 LINC00313P59037 77 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 ATP5EP2Q5VTU8 51 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 Q5VV11 94 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 TMEM254Q8TBM7 123 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 CYSTM1Q9H1C7 97 aa1.78□□□□□ -2.12
NPM1-210ENST00000523339 hDV103S1A0JD37 113 aa1.77□□□□□ -2.13
NPM1-210ENST00000523339 C8orf87E5RJ46 101 aa1.77□□□□□ -2.13
NPM1-210ENST00000523339 J3QR89 54 aa1.77□□□□□ -2.13
NPM1-210ENST00000523339 HRES1P13985 223 aa1.77□□□□□ -2.13
NPM1-210ENST00000523339 CASC2Q6XLA1 102 aa1.77□□□□□ -2.13
NPM1-210ENST00000523339 KRTAP5-5Q701N2 237 aaPredicted RBP1.77□□□□□ -2.13
NPM1-210ENST00000523339 MRPL34Q9BQ48 92 aaKnown RBP1.77□□□□□ -2.13
NPM1-210ENST00000523339 ZCCHC13Q8WW36 166 aaKnown RBP1.76□□□□□ -2.13
NPM1-210ENST00000523339 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
NPM1-210ENST00000523339 KRTAP12-2P59991 146 aa1.74□□□□□ -2.13
NPM1-210ENST00000523339 KLKP1Q107X0 134 aa1.74□□□□□ -2.13
NPM1-210ENST00000523339 NDUFB1O75438 58 aa1.73□□□□□ -2.13
NPM1-210ENST00000523339 CCDC179H3BU77 68 aa1.72□□□□□ -2.13
NPM1-210ENST00000523339 SPINK7P58062 85 aa1.72□□□□□ -2.13
NPM1-210ENST00000523339 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
NPM1-210ENST00000523339 TRAV7A0A075B6U4 112 aa1.71□□□□□ -2.14
NPM1-210ENST00000523339 H0Y9P7 68 aa1.71□□□□□ -2.14
NPM1-210ENST00000523339 NDUFS5O43920 106 aa1.71□□□□□ -2.14
NPM1-210ENST00000523339 CYP4F30PQ9H0H9 118 aa1.71□□□□□ -2.14
NPM1-210ENST00000523339 TRAV22A0A0B4J277 110 aa1.7□□□□□ -2.14
NPM1-210ENST00000523339 ATOX1O00244 68 aa1.7□□□□□ -2.14
NPM1-210ENST00000523339 UQCRQO14949 82 aa1.7□□□□□ -2.14
NPM1-210ENST00000523339 SCGB1A1P11684 91 aa1.7□□□□□ -2.14
NPM1-210ENST00000523339 SERP2Q8N6R1 65 aa1.7□□□□□ -2.14
NPM1-210ENST00000523339 SNURFQ9Y675 71 aa1.7□□□□□ -2.14
NPM1-210ENST00000523339 COX7CP15954 63 aa1.69□□□□□ -2.14
NPM1-210ENST00000523339 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
NPM1-210ENST00000523339 LINC00208Q96KT6 92 aa1.69□□□□□ -2.14
NPM1-210ENST00000523339 H7BZZ5 65 aa1.68□□□□□ -2.14
NPM1-210ENST00000523339 MT1BP07438 61 aa1.68□□□□□ -2.14
NPM1-210ENST00000523339 C4orf26Q17RF5 130 aa1.68□□□□□ -2.14
NPM1-210ENST00000523339 C20orf197Q8N268 126 aa1.68□□□□□ -2.14
NPM1-210ENST00000523339 C1orf64Q8NEQ6 169 aa1.68□□□□□ -2.14
NPM1-210ENST00000523339 TP53AIP1Q9HCN2 124 aa1.68□□□□□ -2.14
NPM1-210ENST00000523339 PRO2289Q9P1D8 64 aa1.68□□□□□ -2.14
NPM1-210ENST00000523339 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
NPM1-210ENST00000523339 C7orf65Q6ZTY9 151 aa1.67□□□□□ -2.14
NPM1-210ENST00000523339 ANAPC13Q9BS18 74 aa1.67□□□□□ -2.14
NPM1-210ENST00000523339 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
NPM1-210ENST00000523339 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
NPM1-210ENST00000523339 LOC101927531A0A1B0GV80 90 aa1.66□□□□□ -2.14
NPM1-210ENST00000523339 C5orf47Q569G3 176 aa1.66□□□□□ -2.14
NPM1-210ENST00000523339 PRAC1Q96KF2 57 aa1.66□□□□□ -2.14
NPM1-210ENST00000523339 NDUFAF8A1L188 74 aa1.65□□□□□ -2.15
NPM1-210ENST00000523339 H3BPC8 53 aa1.64□□□□□ -2.15
NPM1-210ENST00000523339 KRTAP19-8Q3LI54 63 aa1.64□□□□□ -2.15
NPM1-210ENST00000523339 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
NPM1-210ENST00000523339 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
NPM1-210ENST00000523339 SMIM20Q8N5G0 67 aa1.64□□□□□ -2.15
NPM1-210ENST00000523339 DMAC1Q96GE9 116 aa1.64□□□□□ -2.15
NPM1-210ENST00000523339 MP68P56378 58 aa1.63□□□□□ -2.15
NPM1-210ENST00000523339 LCA10Q71F78 164 aa1.63□□□□□ -2.15
NPM1-210ENST00000523339 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
NPM1-210ENST00000523339 CSAG1Q6PB30 78 aa1.61□□□□□ -2.15
NPM1-210ENST00000523339 SPANXA2-OT1Q8N9U9 137 aa1.61□□□□□ -2.15
NPM1-210ENST00000523339 PLAC4Q8WY50 150 aa1.6□□□□□ -2.15
NPM1-210ENST00000523339 MT4P47944 62 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms