RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
NKX3-1-202ENST00000523261 LOC110117498A0A087WWA1 95 aa5.32□□□□□ -1.56
NKX3-1-202ENST00000523261 C14orf144Q96I85 54 aa5.32□□□□□ -1.56
NKX3-1-202ENST00000523261 BAALC-AS2P0C853 105 aa5.31□□□□□ -1.56
NKX3-1-202ENST00000523261 HIST1H2BLQ99880 126 aa5.31□□□□□ -1.56
NKX3-1-202ENST00000523261 CASC2Q6XLA1 102 aa5.3□□□□□ -1.56
NKX3-1-202ENST00000523261 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
NKX3-1-202ENST00000523261 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
NKX3-1-202ENST00000523261 K7ERJ3 54 aa5.28□□□□□ -1.56
NKX3-1-202ENST00000523261 S100A1P23297 94 aa5.27□□□□□ -1.57
NKX3-1-202ENST00000523261 JMJD7-PLA2G4BH0Y9G9 81 aa5.25□□□□□ -1.57
NKX3-1-202ENST00000523261 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
NKX3-1-202ENST00000523261 S100A2P29034 98 aa5.22□□□□□ -1.57
NKX3-1-202ENST00000523261 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
NKX3-1-202ENST00000523261 C14orf132Q9NPU4 83 aa5.22□□□□□ -1.57
NKX3-1-202ENST00000523261 PAM16Q9Y3D7 125 aa5.22□□□□□ -1.57
NKX3-1-202ENST00000523261 R4GN34 69 aa5.22□□□□□ -1.57
NKX3-1-202ENST00000523261 Q8N9L7 120 aa5.21□□□□□ -1.58
NKX3-1-202ENST00000523261 NDUFC1O43677 76 aa5.2□□□□□ -1.58
NKX3-1-202ENST00000523261 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
NKX3-1-202ENST00000523261 BPY2O14599 106 aa5.19□□□□□ -1.58
NKX3-1-202ENST00000523261 MT1EP04732 61 aa5.19□□□□□ -1.58
NKX3-1-202ENST00000523261 SCGB1C2P0DMR2 95 aa5.18□□□□□ -1.58
NKX3-1-202ENST00000523261 SPATA45Q537H7 98 aa5.17□□□□□ -1.58
NKX3-1-202ENST00000523261 M0QZ58 72 aa5.15□□□□□ -1.59
NKX3-1-202ENST00000523261 LINC01554Q52M75 96 aa5.12□□□□□ -1.59
NKX3-1-202ENST00000523261 P0C880 135 aa5.1□□□□□ -1.59
NKX3-1-202ENST00000523261 HSD52Q0P140 79 aa5.09□□□□□ -1.59
NKX3-1-202ENST00000523261 MT1GP13640 62 aa5.08□□□□□ -1.6
NKX3-1-202ENST00000523261 ATXN8Q156A1 80 aa5.08□□□□□ -1.6
NKX3-1-202ENST00000523261 CYP4F30PQ9H0H9 118 aa5.08□□□□□ -1.6
NKX3-1-202ENST00000523261 VAMP8Q9BV40 100 aa5.06□□□□□ -1.6
NKX3-1-202ENST00000523261 K7EP34 96 aa5.05□□□□□ -1.6
NKX3-1-202ENST00000523261 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
NKX3-1-202ENST00000523261 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
NKX3-1-202ENST00000523261 MT1MQ8N339 61 aa5□□□□□ -1.61
NKX3-1-202ENST00000523261 TP53AIP1Q9HCN2 124 aa5□□□□□ -1.61
NKX3-1-202ENST00000523261 NAA38Q9BRA0 125 aaKnown RBP4.98□□□□□ -1.61
NKX3-1-202ENST00000523261 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
NKX3-1-202ENST00000523261 S100A6P06703 90 aa4.96□□□□□ -1.62
NKX3-1-202ENST00000523261 LOC105371267A0A1B0GV96 52 aa4.95□□□□□ -1.62
NKX3-1-202ENST00000523261 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
NKX3-1-202ENST00000523261 ACYP1P07311 99 aa4.91□□□□□ -1.62
NKX3-1-202ENST00000523261 LOC101927531A0A1B0GV80 90 aa4.9□□□□□ -1.63
NKX3-1-202ENST00000523261 AHNAKQ09666 5890 aaKnown RBP4.89□□□□□ -1.63
NKX3-1-202ENST00000523261 BATFQ16520 125 aa4.89□□□□□ -1.63
NKX3-1-202ENST00000523261 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
NKX3-1-202ENST00000523261 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
NKX3-1-202ENST00000523261 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
NKX3-1-202ENST00000523261 MT1LQ93083 61 aa4.83□□□□□ -1.64
NKX3-1-202ENST00000523261 MT-ATP8P03928 68 aa4.82□□□□□ -1.64
NKX3-1-202ENST00000523261 A0A1W2PPM0 123 aa4.79□□□□□ -1.64
NKX3-1-202ENST00000523261 SMIM6P0DI80 62 aa4.78□□□□□ -1.64
NKX3-1-202ENST00000523261 H3BT86 120 aa4.76□□□□□ -1.65
NKX3-1-202ENST00000523261 UQCR10Q9UDW1 63 aa4.76□□□□□ -1.65
NKX3-1-202ENST00000523261 TSTD3H0UI37 97 aa4.75□□□□□ -1.65
NKX3-1-202ENST00000523261 UBL5Q9BZL1 73 aa4.74□□□□□ -1.65
NKX3-1-202ENST00000523261 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
NKX3-1-202ENST00000523261 PYY3Q5JQD4 70 aa4.72□□□□□ -1.65
NKX3-1-202ENST00000523261 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
NKX3-1-202ENST00000523261 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
NKX3-1-202ENST00000523261 SPCS1Q9Y6A9 102 aa4.7□□□□□ -1.66
NKX3-1-202ENST00000523261 A0A0D9SG42 100 aa4.69□□□□□ -1.66
NKX3-1-202ENST00000523261 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
NKX3-1-202ENST00000523261 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
NKX3-1-202ENST00000523261 PCP4L1A6NKN8 68 aa4.65□□□□□ -1.67
NKX3-1-202ENST00000523261 H0Y9P7 68 aa4.65□□□□□ -1.67
NKX3-1-202ENST00000523261 ATOX1O00244 68 aa4.63□□□□□ -1.67
NKX3-1-202ENST00000523261 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
NKX3-1-202ENST00000523261 H3BS24 57 aa4.62□□□□□ -1.67
NKX3-1-202ENST00000523261 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
NKX3-1-202ENST00000523261 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
NKX3-1-202ENST00000523261 M0R143 59 aa4.59□□□□□ -1.67
NKX3-1-202ENST00000523261 UQCRQO14949 82 aa4.58□□□□□ -1.68
NKX3-1-202ENST00000523261 TAX1BP3O14907 124 aa4.51□□□□□ -1.69
NKX3-1-202ENST00000523261 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
NKX3-1-202ENST00000523261 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
NKX3-1-202ENST00000523261 LINC00208Q96KT6 92 aa4.5□□□□□ -1.69
NKX3-1-202ENST00000523261 DMAC1Q96GE9 116 aa4.49□□□□□ -1.69
NKX3-1-202ENST00000523261 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
NKX3-1-202ENST00000523261 COL5A1-AS1Q5SY13 56 aa4.46□□□□□ -1.7
NKX3-1-202ENST00000523261 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
NKX3-1-202ENST00000523261 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
NKX3-1-202ENST00000523261 A0A1B0GV90 55 aa4.43□□□□□ -1.7
NKX3-1-202ENST00000523261 C9orf118A6NHY6 69 aa4.42□□□□□ -1.7
NKX3-1-202ENST00000523261 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
NKX3-1-202ENST00000523261 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
NKX3-1-202ENST00000523261 PCP4P48539 62 aa4.36□□□□□ -1.71
NKX3-1-202ENST00000523261 TRAV7A0A075B6U4 112 aa4.35□□□□□ -1.71
NKX3-1-202ENST00000523261 MP68P56378 58 aa4.32□□□□□ -1.72
NKX3-1-202ENST00000523261 PRO0461Q9UI25 63 aa4.32□□□□□ -1.72
NKX3-1-202ENST00000523261 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
NKX3-1-202ENST00000523261 GTF2H5Q6ZYL4 71 aa4.29□□□□□ -1.72
NKX3-1-202ENST00000523261 SPTSSBQ8NFR3 76 aa4.29□□□□□ -1.72
NKX3-1-202ENST00000523261 HIST1H4AP62805 103 aaKnown RBP4.28□□□□□ -1.72
NKX3-1-202ENST00000523261 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
NKX3-1-202ENST00000523261 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
NKX3-1-202ENST00000523261 F8W1H4 67 aa4.22□□□□□ -1.73
NKX3-1-202ENST00000523261 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
NKX3-1-202ENST00000523261 ACYP2P14621 99 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms