RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 ALMS1Q8TCU4 4167 aa2.23□□□□□ -2.05
SGCE-211ENST00000522045 FRAS1Q86XX4 4008 aa2.22□□□□□ -2.05
SGCE-211ENST00000522045 F8P00451 2351 aa2.22□□□□□ -2.05
SGCE-211ENST00000522045 DMAC1Q96GE9 116 aa2.22□□□□□ -2.05
SGCE-211ENST00000522045 MAST4O15021 2626 aa2.22□□□□□ -2.05
SGCE-211ENST00000522045 PKD1L1Q8TDX9 2849 aa2.22□□□□□ -2.05
SGCE-211ENST00000522045 DNAH5Q8TE73 4624 aa2.21□□□□□ -2.06
SGCE-211ENST00000522045 C7orf65Q6ZTY9 151 aa2.21□□□□□ -2.06
SGCE-211ENST00000522045 SSBP3-AS1Q7Z2R9 100 aa2.21□□□□□ -2.06
SGCE-211ENST00000522045 BAHCC1Q9P281 2608 aa2.21□□□□□ -2.06
SGCE-211ENST00000522045 IGLV7-43P04211 117 aa2.2□□□□□ -2.06
SGCE-211ENST00000522045 SPINK7P58062 85 aa2.2□□□□□ -2.06
SGCE-211ENST00000522045 SPAG11AQ6PDA7 123 aa2.2□□□□□ -2.06
SGCE-211ENST00000522045 SACSQ9NZJ4 4579 aa2.2□□□□□ -2.06
SGCE-211ENST00000522045 ACYP2P14621 99 aa2.19□□□□□ -2.06
SGCE-211ENST00000522045 SPTSSBQ8NFR3 76 aa2.19□□□□□ -2.06
SGCE-211ENST00000522045 FLNBO75369 2602 aaKnown RBP2.19□□□□□ -2.06
SGCE-211ENST00000522045 KRTAP13-2Q52LG2 175 aa2.18□□□□□ -2.06
SGCE-211ENST00000522045 RBM12B-AS1Q9P1G2 102 aa2.18□□□□□ -2.06
SGCE-211ENST00000522045 STAB2Q8WWQ8 2551 aa2.17□□□□□ -2.06
SGCE-211ENST00000522045 CSMD3Q7Z407 3707 aa2.17□□□□□ -2.06
SGCE-211ENST00000522045 Q6ZSA8 131 aa2.17□□□□□ -2.06
SGCE-211ENST00000522045 STAB1Q9NY15 2570 aa2.17□□□□□ -2.06
SGCE-211ENST00000522045 LINC00313P59037 77 aa2.16□□□□□ -2.06
SGCE-211ENST00000522045 SPATA8Q6RVD6 105 aa2.16□□□□□ -2.06
SGCE-211ENST00000522045 SPINK6Q6UWN8 80 aa2.16□□□□□ -2.06
SGCE-211ENST00000522045 CIRBP-AS1Q8TBR5 109 aa2.16□□□□□ -2.06
SGCE-211ENST00000522045 NOTCH1P46531 2555 aa2.16□□□□□ -2.06
SGCE-211ENST00000522045 KMT2AQ03164 3969 aa2.15□□□□□ -2.06
SGCE-211ENST00000522045 C1orf134Q5TEV5 83 aa2.15□□□□□ -2.07
SGCE-211ENST00000522045 KRTAP4-1Q9BYQ7 146 aa2.15□□□□□ -2.07
SGCE-211ENST00000522045 NBEAL1Q6ZS30 2694 aa2.14□□□□□ -2.07
SGCE-211ENST00000522045 A0A1B0GU69 56 aa2.14□□□□□ -2.07
SGCE-211ENST00000522045 PKHD1L1Q86WI1 4243 aa2.14□□□□□ -2.07
SGCE-211ENST00000522045 MGAM2Q2M2H8 2515 aa2.13□□□□□ -2.07
SGCE-211ENST00000522045 RPS29P62273 56 aaKnown RBP2.13□□□□□ -2.07
SGCE-211ENST00000522045 TENM2Q9NT68 2774 aa2.12□□□□□ -2.07
SGCE-211ENST00000522045 FAT2Q9NYQ8 4349 aa2.12□□□□□ -2.07
SGCE-211ENST00000522045 UQCR11O14957 56 aa2.12□□□□□ -2.07
SGCE-211ENST00000522045 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
SGCE-211ENST00000522045 LRP1BQ9NZR2 4599 aa2.11□□□□□ -2.07
SGCE-211ENST00000522045 KRTAP21-3Q3LHN1 58 aa2.11□□□□□ -2.07
SGCE-211ENST00000522045 SRRM2Q9UQ35 2752 aaKnown RBP2.11□□□□□ -2.07
SGCE-211ENST00000522045 SPINK1P00995 79 aa2.1□□□□□ -2.07
SGCE-211ENST00000522045 COL6A5A8TX70 2615 aa2.1□□□□□ -2.07
SGCE-211ENST00000522045 COL7A1Q02388 2944 aa2.1□□□□□ -2.07
SGCE-211ENST00000522045 VPS13BQ7Z7G8 4022 aa2.09□□□□□ -2.07
SGCE-211ENST00000522045 APOBP04114 4563 aaKnown RBP2.09□□□□□ -2.07
SGCE-211ENST00000522045 LY6G6CO95867 125 aa2.09□□□□□ -2.07
SGCE-211ENST00000522045 RETNLBQ9BQ08 111 aa2.09□□□□□ -2.07
SGCE-211ENST00000522045 DYNC1H1Q14204 4646 aaKnown RBP2.09□□□□□ -2.07
SGCE-211ENST00000522045 PKD1P98161 4303 aa2.08□□□□□ -2.08
SGCE-211ENST00000522045 DNHD1Q96M86 4753 aa2.08□□□□□ -2.08
SGCE-211ENST00000522045 A8MUU9 505 aa2.08□□□□□ -2.08
SGCE-211ENST00000522045 C20orf166-AS1Q96NR2 134 aa2.08□□□□□ -2.08
SGCE-211ENST00000522045 LINC01554Q52M75 96 aa2.07□□□□□ -2.08
SGCE-211ENST00000522045 ADM2Q7Z4H4 148 aa2.07□□□□□ -2.08
SGCE-211ENST00000522045 LINC00304Q8N9R0 145 aa2.06□□□□□ -2.08
SGCE-211ENST00000522045 PKHD1P08F94 4074 aa2.06□□□□□ -2.08
SGCE-211ENST00000522045 HYDINQ4G0P3 5121 aa2.05□□□□□ -2.08
SGCE-211ENST00000522045 H0YAA0 97 aa2.05□□□□□ -2.08
SGCE-211ENST00000522045 FBN3Q75N90 2809 aa2.05□□□□□ -2.08
SGCE-211ENST00000522045 CAMK2N1Q7Z7J9 78 aa2.04□□□□□ -2.08
SGCE-211ENST00000522045 H1FX-AS1Q4G0G2 97 aa2.03□□□□□ -2.08
SGCE-211ENST00000522045 TNXBP22105 4242 aa2.03□□□□□ -2.08
SGCE-211ENST00000522045 MEGF8Q7Z7M0 2845 aa2.02□□□□□ -2.09
SGCE-211ENST00000522045 KRTAP10-4P60372 401 aaPredicted RBP2.02□□□□□ -2.09
SGCE-211ENST00000522045 CSAG1Q6PB30 78 aa2.02□□□□□ -2.09
SGCE-211ENST00000522045 FAT1Q14517 4588 aa2.01□□□□□ -2.09
SGCE-211ENST00000522045 A0A1B0GU33 70 aa2.01□□□□□ -2.09
SGCE-211ENST00000522045 COX6B2Q6YFQ2 88 aa2.01□□□□□ -2.09
SGCE-211ENST00000522045 HSPG2P98160 4391 aa2□□□□□ -2.09
SGCE-211ENST00000522045 KRTAP25-1Q3LHN0 102 aa2□□□□□ -2.09
SGCE-211ENST00000522045 FAT3Q8TDW7 4589 aa1.99□□□□□ -2.09
SGCE-211ENST00000522045 RYR2Q92736 4967 aa1.98□□□□□ -2.09
SGCE-211ENST00000522045 C9orf92A6NGG3 77 aa1.98□□□□□ -2.09
SGCE-211ENST00000522045 TGP01266 2768 aa1.98□□□□□ -2.09
SGCE-211ENST00000522045 LRP1Q07954 4544 aaKnown RBP1.97□□□□□ -2.09
SGCE-211ENST00000522045 K7ERS5 55 aa1.96□□□□□ -2.1
SGCE-211ENST00000522045 RPL37P61927 97 aaKnown RBP1.95□□□□□ -2.1
SGCE-211ENST00000522045 ROMO1P60602 79 aa1.94□□□□□ -2.1
SGCE-211ENST00000522045 RYR1P21817 5038 aa1.93□□□□□ -2.1
SGCE-211ENST00000522045 SMR3BP02814 79 aaPredicted RBP1.93□□□□□ -2.1
SGCE-211ENST00000522045 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
SGCE-211ENST00000522045 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
SGCE-211ENST00000522045 MYCBP2O75592 4640 aa1.92□□□□□ -2.1
SGCE-211ENST00000522045 FLG2Q5D862 2391 aaPredicted RBP1.92□□□□□ -2.1
SGCE-211ENST00000522045 S4R3F8 94 aa1.92□□□□□ -2.1
SGCE-211ENST00000522045 FCGBPQ9Y6R7 5405 aaPredicted RBP1.9□□□□□ -2.11
SGCE-211ENST00000522045 P0C880 135 aa1.88□□□□□ -2.11
SGCE-211ENST00000522045 TPRXLQ17RH7 258 aa1.88□□□□□ -2.11
SGCE-211ENST00000522045 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
SGCE-211ENST00000522045 A0A0D9SG42 100 aa1.86□□□□□ -2.11
SGCE-211ENST00000522045 M0QZ58 72 aa1.86□□□□□ -2.11
SGCE-211ENST00000522045 MT1HL1P0DM35 61 aa1.86□□□□□ -2.11
SGCE-211ENST00000522045 Q5VSD8 79 aa1.86□□□□□ -2.11
SGCE-211ENST00000522045 CRIPTQ9P021 101 aa1.85□□□□□ -2.11
SGCE-211ENST00000522045 RYR3Q15413 4870 aa1.84□□□□□ -2.12
SGCE-211ENST00000522045 KMT2CQ8NEZ4 4911 aaKnown RBP1.83□□□□□ -2.12
SGCE-211ENST00000522045 C10orf95Q9H7T3 257 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms