RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 FLNCQ14315 2725 aa2.79□□□□□ -1.96
NUDCD1-204ENST00000521439 DNAH10Q8IVF4 4471 aa2.79□□□□□ -1.96
NUDCD1-204ENST00000521439 FLG2Q5D862 2391 aaPredicted RBP2.79□□□□□ -1.96
NUDCD1-204ENST00000521439 ZNF462Q96JM2 2506 aa2.78□□□□□ -1.96
NUDCD1-204ENST00000521439 APLNQ9ULZ1 77 aa2.78□□□□□ -1.96
NUDCD1-204ENST00000521439 CENPEQ02224 2701 aa2.78□□□□□ -1.96
NUDCD1-204ENST00000521439 TENM4Q6N022 2769 aa2.78□□□□□ -1.97
NUDCD1-204ENST00000521439 ZNF469Q96JG9 3925 aaPredicted RBP2.77□□□□□ -1.97
NUDCD1-204ENST00000521439 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
NUDCD1-204ENST00000521439 UBR5O95071 2799 aaPredicted RBP2.77□□□□□ -1.97
NUDCD1-204ENST00000521439 SRRM2Q9UQ35 2752 aaKnown RBP2.77□□□□□ -1.97
NUDCD1-204ENST00000521439 SPINK1P00995 79 aa2.77□□□□□ -1.97
NUDCD1-204ENST00000521439 RPS29P62273 56 aaKnown RBP2.77□□□□□ -1.97
NUDCD1-204ENST00000521439 DNAH7Q8WXX0 4024 aa2.77□□□□□ -1.97
NUDCD1-204ENST00000521439 DNAH9Q9NYC9 4486 aa2.77□□□□□ -1.97
NUDCD1-204ENST00000521439 POLQO75417 2590 aa2.76□□□□□ -1.97
NUDCD1-204ENST00000521439 SETD2Q9BYW2 2564 aaPredicted RBP2.76□□□□□ -1.97
NUDCD1-204ENST00000521439 VWFP04275 2813 aa2.76□□□□□ -1.97
NUDCD1-204ENST00000521439 PRKDCP78527 4128 aaKnown RBP2.76□□□□□ -1.97
NUDCD1-204ENST00000521439 SPINK6Q6UWN8 80 aa2.76□□□□□ -1.97
NUDCD1-204ENST00000521439 FRAS1Q86XX4 4008 aa2.76□□□□□ -1.97
NUDCD1-204ENST00000521439 FLNAP21333 2647 aaKnown RBP2.76□□□□□ -1.97
NUDCD1-204ENST00000521439 CCDC168Q8NDH2 2452 aa2.76□□□□□ -1.97
NUDCD1-204ENST00000521439 ABCA12Q86UK0 2595 aa2.75□□□□□ -1.97
NUDCD1-204ENST00000521439 DNAH6Q9C0G6 4158 aa2.75□□□□□ -1.97
NUDCD1-204ENST00000521439 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
NUDCD1-204ENST00000521439 S4R3F8 94 aa2.74□□□□□ -1.97
NUDCD1-204ENST00000521439 CMYA5Q8N3K9 4069 aa2.73□□□□□ -1.97
NUDCD1-204ENST00000521439 HUWE1Q7Z6Z7 4374 aaKnown RBP2.73□□□□□ -1.97
NUDCD1-204ENST00000521439 PKD1L1Q8TDX9 2849 aa2.73□□□□□ -1.97
NUDCD1-204ENST00000521439 HECTD1Q9ULT8 2610 aa2.73□□□□□ -1.97
NUDCD1-204ENST00000521439 MYO18BQ8IUG5 2567 aa2.73□□□□□ -1.97
NUDCD1-204ENST00000521439 HECTD4Q9Y4D8 3996 aa2.73□□□□□ -1.97
NUDCD1-204ENST00000521439 HELZ2Q9BYK8 2649 aaKnown RBP2.72□□□□□ -1.97
NUDCD1-204ENST00000521439 DNAH2Q9P225 4427 aa2.72□□□□□ -1.97
NUDCD1-204ENST00000521439 BAHCC1Q9P281 2608 aa2.71□□□□□ -1.98
NUDCD1-204ENST00000521439 CUBNO60494 3623 aa2.71□□□□□ -1.98
NUDCD1-204ENST00000521439 IGSF10Q6WRI0 2623 aa2.71□□□□□ -1.98
NUDCD1-204ENST00000521439 PDZD2O15018 2839 aa2.7□□□□□ -1.98
NUDCD1-204ENST00000521439 TENM3Q9P273 2699 aa2.7□□□□□ -1.98
NUDCD1-204ENST00000521439 FAM208BQ5VWN6 2430 aa2.7□□□□□ -1.98
NUDCD1-204ENST00000521439 FBN1P35555 2871 aaKnown RBP2.7□□□□□ -1.98
NUDCD1-204ENST00000521439 MEGF8Q7Z7M0 2845 aa2.69□□□□□ -1.98
NUDCD1-204ENST00000521439 SACSQ9NZJ4 4579 aa2.68□□□□□ -1.98
NUDCD1-204ENST00000521439 TEP1Q99973 2627 aaKnown RBP2.67□□□□□ -1.98
NUDCD1-204ENST00000521439 CACNA1AO00555 2505 aa2.67□□□□□ -1.98
NUDCD1-204ENST00000521439 DNAH11Q96DT5 4516 aa2.66□□□□□ -1.98
NUDCD1-204ENST00000521439 Q5VSD8 79 aa2.65□□□□□ -1.99
NUDCD1-204ENST00000521439 PLECQ15149 4684 aaKnown RBP2.65□□□□□ -1.99
NUDCD1-204ENST00000521439 ACANP16112 2415 aa2.64□□□□□ -1.99
NUDCD1-204ENST00000521439 FASNP49327 2511 aaKnown RBP2.64□□□□□ -1.99
NUDCD1-204ENST00000521439 TENM1Q9UKZ4 2725 aa2.63□□□□□ -1.99
NUDCD1-204ENST00000521439 NBEAL1Q6ZS30 2694 aa2.63□□□□□ -1.99
NUDCD1-204ENST00000521439 A0A0D9SG42 100 aa2.63□□□□□ -1.99
NUDCD1-204ENST00000521439 CSMD3Q7Z407 3707 aa2.63□□□□□ -1.99
NUDCD1-204ENST00000521439 NSD1Q96L73 2696 aaPredicted RBP2.62□□□□□ -1.99
NUDCD1-204ENST00000521439 MAST4O15021 2626 aa2.62□□□□□ -1.99
NUDCD1-204ENST00000521439 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
NUDCD1-204ENST00000521439 ITPR2Q14571 2701 aa2.61□□□□□ -1.99
NUDCD1-204ENST00000521439 TGP01266 2768 aa2.6□□□□□ -1.99
NUDCD1-204ENST00000521439 J3QKU1 62 aa2.6□□□□□ -1.99
NUDCD1-204ENST00000521439 ATRQ13535 2644 aa2.6□□□□□ -1.99
NUDCD1-204ENST00000521439 M0QZ58 72 aa2.59□□□□□ -1.99
NUDCD1-204ENST00000521439 KRTAP12-1P59990 96 aa2.59□□□□□ -1.99
NUDCD1-204ENST00000521439 SMR3AQ99954 134 aa2.59□□□□□ -1.99
NUDCD1-204ENST00000521439 DNAH5Q8TE73 4624 aa2.59□□□□□ -2
NUDCD1-204ENST00000521439 FLNBO75369 2602 aaKnown RBP2.58□□□□□ -2
NUDCD1-204ENST00000521439 COL7A1Q02388 2944 aa2.58□□□□□ -2
NUDCD1-204ENST00000521439 PKHD1L1Q86WI1 4243 aa2.57□□□□□ -2
NUDCD1-204ENST00000521439 NOTCH1P46531 2555 aa2.56□□□□□ -2
NUDCD1-204ENST00000521439 USP24Q9UPU5 2620 aa2.55□□□□□ -2
NUDCD1-204ENST00000521439 COL6A5A8TX70 2615 aa2.53□□□□□ -2
NUDCD1-204ENST00000521439 LRP1BQ9NZR2 4599 aa2.52□□□□□ -2.01
NUDCD1-204ENST00000521439 STAB2Q8WWQ8 2551 aa2.52□□□□□ -2.01
NUDCD1-204ENST00000521439 KMT2AQ03164 3969 aa2.51□□□□□ -2.01
NUDCD1-204ENST00000521439 FBN3Q75N90 2809 aa2.5□□□□□ -2.01
NUDCD1-204ENST00000521439 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
NUDCD1-204ENST00000521439 LRP1Q07954 4544 aaKnown RBP2.48□□□□□ -2.01
NUDCD1-204ENST00000521439 VPS13BQ7Z7G8 4022 aa2.48□□□□□ -2.01
NUDCD1-204ENST00000521439 APOBP04114 4563 aaKnown RBP2.47□□□□□ -2.01
NUDCD1-204ENST00000521439 STARD9Q9P2P6 4700 aa2.47□□□□□ -2.01
NUDCD1-204ENST00000521439 MYCBP2O75592 4640 aa2.46□□□□□ -2.01
NUDCD1-204ENST00000521439 MGAM2Q2M2H8 2515 aa2.46□□□□□ -2.01
NUDCD1-204ENST00000521439 PKHD1P08F94 4074 aa2.46□□□□□ -2.02
NUDCD1-204ENST00000521439 DYNC1H1Q14204 4646 aaKnown RBP2.46□□□□□ -2.02
NUDCD1-204ENST00000521439 STAB1Q9NY15 2570 aa2.46□□□□□ -2.02
NUDCD1-204ENST00000521439 PKD1P98161 4303 aa2.46□□□□□ -2.02
NUDCD1-204ENST00000521439 HSPG2P98160 4391 aa2.45□□□□□ -2.02
NUDCD1-204ENST00000521439 TNXBP22105 4242 aa2.44□□□□□ -2.02
NUDCD1-204ENST00000521439 FAT2Q9NYQ8 4349 aa2.44□□□□□ -2.02
NUDCD1-204ENST00000521439 C9orf92A6NGG3 77 aa2.42□□□□□ -2.02
NUDCD1-204ENST00000521439 FAT3Q8TDW7 4589 aa2.42□□□□□ -2.02
NUDCD1-204ENST00000521439 FAT1Q14517 4588 aa2.4□□□□□ -2.03
NUDCD1-204ENST00000521439 DMBT1Q9UGM3 2413 aaPredicted RBP2.39□□□□□ -2.03
NUDCD1-204ENST00000521439 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
NUDCD1-204ENST00000521439 KRTAP21-3Q3LHN1 58 aa2.29□□□□□ -2.04
NUDCD1-204ENST00000521439 FLGP20930 4061 aaPredicted RBP2.29□□□□□ -2.04
NUDCD1-204ENST00000521439 TNP1P09430 55 aa2.27□□□□□ -2.05
NUDCD1-204ENST00000521439 DNHD1Q96M86 4753 aa2.25□□□□□ -2.05
NUDCD1-204ENST00000521439 CRCT1Q9UGL9 99 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms