RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 LINC00472Q9H8W2 130 aa1.16□□□□□ -2.22
HMGN1P28-201ENST00000521340 DNAH9Q9NYC9 4486 aa1.16□□□□□ -2.22
HMGN1P28-201ENST00000521340 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
HMGN1P28-201ENST00000521340 MGAM2Q2M2H8 2515 aa1.16□□□□□ -2.22
HMGN1P28-201ENST00000521340 COL6A5A8TX70 2615 aa1.16□□□□□ -2.22
HMGN1P28-201ENST00000521340 DNAH6Q9C0G6 4158 aa1.15□□□□□ -2.22
HMGN1P28-201ENST00000521340 DNAH17Q9UFH2 4485 aa1.15□□□□□ -2.23
HMGN1P28-201ENST00000521340 K7EIL1 84 aa1.15□□□□□ -2.23
HMGN1P28-201ENST00000521340 RPL37AP61513 92 aaKnown RBP1.15□□□□□ -2.23
HMGN1P28-201ENST00000521340 CASC2Q6XLA1 102 aa1.15□□□□□ -2.23
HMGN1P28-201ENST00000521340 PHF5AQ7RTV0 110 aaKnown RBP1.15□□□□□ -2.23
HMGN1P28-201ENST00000521340 LINC00208Q96KT6 92 aa1.15□□□□□ -2.23
HMGN1P28-201ENST00000521340 PLAC8Q9NZF1 115 aa1.15□□□□□ -2.23
HMGN1P28-201ENST00000521340 DNAH10Q8IVF4 4471 aa1.14□□□□□ -2.23
HMGN1P28-201ENST00000521340 LOC101927531A0A1B0GV80 90 aa1.14□□□□□ -2.23
HMGN1P28-201ENST00000521340 APLNQ9ULZ1 77 aa1.14□□□□□ -2.23
HMGN1P28-201ENST00000521340 ALMS1Q8TCU4 4167 aa1.14□□□□□ -2.23
HMGN1P28-201ENST00000521340 PRKDCP78527 4128 aaKnown RBP1.13□□□□□ -2.23
HMGN1P28-201ENST00000521340 VPS13DQ5THJ4 4388 aa1.13□□□□□ -2.23
HMGN1P28-201ENST00000521340 DNAH8Q96JB1 4490 aa1.13□□□□□ -2.23
HMGN1P28-201ENST00000521340 NBDYA0A0U1RRE5 68 aa1.13□□□□□ -2.23
HMGN1P28-201ENST00000521340 UBE2DNLQ8IWF7 75 aa1.13□□□□□ -2.23
HMGN1P28-201ENST00000521340 LIMD2Q9BT23 127 aa1.13□□□□□ -2.23
HMGN1P28-201ENST00000521340 PRR15LQ9BU68 103 aa1.13□□□□□ -2.23
HMGN1P28-201ENST00000521340 TP53AIP1Q9HCN2 124 aa1.13□□□□□ -2.23
HMGN1P28-201ENST00000521340 FBN3Q75N90 2809 aa1.12□□□□□ -2.23
HMGN1P28-201ENST00000521340 NUPR2A6NF83 97 aa1.12□□□□□ -2.23
HMGN1P28-201ENST00000521340 A6NN06 94 aa1.12□□□□□ -2.23
HMGN1P28-201ENST00000521340 MRPL34Q9BQ48 92 aaKnown RBP1.12□□□□□ -2.23
HMGN1P28-201ENST00000521340 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
HMGN1P28-201ENST00000521340 CDC42SE1Q9NRR8 79 aa1.12□□□□□ -2.23
HMGN1P28-201ENST00000521340 LINC01558Q9Y6Z2 57 aa1.12□□□□□ -2.23
HMGN1P28-201ENST00000521340 CSMD3Q7Z407 3707 aa1.12□□□□□ -2.23
HMGN1P28-201ENST00000521340 COL7A1Q02388 2944 aa1.11□□□□□ -2.23
HMGN1P28-201ENST00000521340 A0A087WTM6 91 aa1.11□□□□□ -2.23
HMGN1P28-201ENST00000521340 CHKB-CPT1BH3BT56 60 aa1.11□□□□□ -2.23
HMGN1P28-201ENST00000521340 ROMO1P60602 79 aa1.11□□□□□ -2.23
HMGN1P28-201ENST00000521340 DMAC1Q96GE9 116 aa1.11□□□□□ -2.23
HMGN1P28-201ENST00000521340 LYSTQ99698 3801 aa1.11□□□□□ -2.23
HMGN1P28-201ENST00000521340 RETNLBQ9BQ08 111 aa1.11□□□□□ -2.23
HMGN1P28-201ENST00000521340 DNAH7Q8WXX0 4024 aa1.1□□□□□ -2.23
HMGN1P28-201ENST00000521340 ATP11AUNQ6ZP68 121 aa1.1□□□□□ -2.23
HMGN1P28-201ENST00000521340 DNAH2Q9P225 4427 aa1.09□□□□□ -2.23
HMGN1P28-201ENST00000521340 SRRM2Q9UQ35 2752 aaKnown RBP1.09□□□□□ -2.23
HMGN1P28-201ENST00000521340 DNAH11Q96DT5 4516 aa1.09□□□□□ -2.23
HMGN1P28-201ENST00000521340 SPINK7P58062 85 aa1.09□□□□□ -2.23
HMGN1P28-201ENST00000521340 KRTAP21-3Q3LHN1 58 aa1.09□□□□□ -2.23
HMGN1P28-201ENST00000521340 SPAG11AQ6PDA7 123 aa1.09□□□□□ -2.23
HMGN1P28-201ENST00000521340 STARD9Q9P2P6 4700 aa1.09□□□□□ -2.24
HMGN1P28-201ENST00000521340 PLECQ15149 4684 aaKnown RBP1.09□□□□□ -2.24
HMGN1P28-201ENST00000521340 DNAH5Q8TE73 4624 aa1.08□□□□□ -2.24
HMGN1P28-201ENST00000521340 KRTAP10-4P60372 401 aaPredicted RBP1.08□□□□□ -2.24
HMGN1P28-201ENST00000521340 Q6ZSA8 131 aa1.08□□□□□ -2.24
HMGN1P28-201ENST00000521340 HECTD4Q9Y4D8 3996 aa1.08□□□□□ -2.24
HMGN1P28-201ENST00000521340 PKHD1L1Q86WI1 4243 aa1.08□□□□□ -2.24
HMGN1P28-201ENST00000521340 SACSQ9NZJ4 4579 aa1.08□□□□□ -2.24
HMGN1P28-201ENST00000521340 FRAS1Q86XX4 4008 aa1.07□□□□□ -2.24
HMGN1P28-201ENST00000521340 FLG2Q5D862 2391 aaPredicted RBP1.07□□□□□ -2.24
HMGN1P28-201ENST00000521340 SPINK6Q6UWN8 80 aa1.07□□□□□ -2.24
HMGN1P28-201ENST00000521340 SSBP3-AS1Q7Z2R9 100 aa1.07□□□□□ -2.24
HMGN1P28-201ENST00000521340 SPTSSBQ8NFR3 76 aa1.07□□□□□ -2.24
HMGN1P28-201ENST00000521340 MEGF8Q7Z7M0 2845 aa1.07□□□□□ -2.24
HMGN1P28-201ENST00000521340 TGP01266 2768 aa1.07□□□□□ -2.24
HMGN1P28-201ENST00000521340 KMT2AQ03164 3969 aa1.06□□□□□ -2.24
HMGN1P28-201ENST00000521340 ACYP2P14621 99 aa1.06□□□□□ -2.24
HMGN1P28-201ENST00000521340 C1orf134Q5TEV5 83 aa1.06□□□□□ -2.24
HMGN1P28-201ENST00000521340 SPATA8Q6RVD6 105 aa1.06□□□□□ -2.24
HMGN1P28-201ENST00000521340 FAT2Q9NYQ8 4349 aa1.06□□□□□ -2.24
HMGN1P28-201ENST00000521340 A0A1B0GU69 56 aa1.05□□□□□ -2.24
HMGN1P28-201ENST00000521340 RPS29P62273 56 aaKnown RBP1.05□□□□□ -2.24
HMGN1P28-201ENST00000521340 PKD1P98161 4303 aa1.05□□□□□ -2.24
HMGN1P28-201ENST00000521340 LY6G6CO95867 125 aa1.04□□□□□ -2.24
HMGN1P28-201ENST00000521340 H0YAA0 97 aa1.03□□□□□ -2.24
HMGN1P28-201ENST00000521340 UQCR11O14957 56 aa1.03□□□□□ -2.24
HMGN1P28-201ENST00000521340 MIR22HGQ0VDD5 57 aa1.03□□□□□ -2.24
HMGN1P28-201ENST00000521340 PKHD1P08F94 4074 aa1.02□□□□□ -2.25
HMGN1P28-201ENST00000521340 APOBP04114 4563 aaKnown RBP1.02□□□□□ -2.25
HMGN1P28-201ENST00000521340 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
HMGN1P28-201ENST00000521340 SPINK1P00995 79 aa1.02□□□□□ -2.25
HMGN1P28-201ENST00000521340 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
HMGN1P28-201ENST00000521340 TNXBP22105 4242 aa1.02□□□□□ -2.25
HMGN1P28-201ENST00000521340 VPS13BQ7Z7G8 4022 aa1.02□□□□□ -2.25
HMGN1P28-201ENST00000521340 LRP1BQ9NZR2 4599 aa1.01□□□□□ -2.25
HMGN1P28-201ENST00000521340 INE1O15225 51 aa1□□□□□ -2.25
HMGN1P28-201ENST00000521340 H1FX-AS1Q4G0G2 97 aa1□□□□□ -2.25
HMGN1P28-201ENST00000521340 CSAG1Q6PB30 78 aa1□□□□□ -2.25
HMGN1P28-201ENST00000521340 DMBT1Q9UGM3 2413 aaPredicted RBP1□□□□□ -2.25
HMGN1P28-201ENST00000521340 C9orf92A6NGG3 77 aa0.99□□□□□ -2.25
HMGN1P28-201ENST00000521340 COX6B2Q6YFQ2 88 aa0.99□□□□□ -2.25
HMGN1P28-201ENST00000521340 DYNC1H1Q14204 4646 aaKnown RBP0.98□□□□□ -2.25
HMGN1P28-201ENST00000521340 UBR4Q5T4S7 5183 aa0.98□□□□□ -2.25
HMGN1P28-201ENST00000521340 HYDINQ4G0P3 5121 aa0.98□□□□□ -2.25
HMGN1P28-201ENST00000521340 FAT1Q14517 4588 aa0.98□□□□□ -2.25
HMGN1P28-201ENST00000521340 HSPG2P98160 4391 aa0.97□□□□□ -2.25
HMGN1P28-201ENST00000521340 RPL37P61927 97 aaKnown RBP0.97□□□□□ -2.25
HMGN1P28-201ENST00000521340 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
HMGN1P28-201ENST00000521340 LRP1Q07954 4544 aaKnown RBP0.97□□□□□ -2.25
HMGN1P28-201ENST00000521340 SMR3BP02814 79 aaPredicted RBP0.96□□□□□ -2.26
HMGN1P28-201ENST00000521340 FAT3Q8TDW7 4589 aa0.96□□□□□ -2.26
HMGN1P28-201ENST00000521340 S4R3F8 94 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms