RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 STAB2Q8WWQ8 2551 aa1.11□□□□□ -2.23
TRAPPC13-212ENST00000520525 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
TRAPPC13-212ENST00000520525 NEBP20929 6669 aa1.11□□□□□ -2.23
TRAPPC13-212ENST00000520525 BSNQ9UPA5 3926 aa1.1□□□□□ -2.23
TRAPPC13-212ENST00000520525 NIPBLQ6KC79 2804 aaeCLIP1.1□□□□□ -2.23
TRAPPC13-212ENST00000520525 A0A096LNI7 61 aa1.1□□□□□ -2.23
TRAPPC13-212ENST00000520525 COX6B2Q6YFQ2 88 aa1.1□□□□□ -2.23
TRAPPC13-212ENST00000520525 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
TRAPPC13-212ENST00000520525 OTOGQ6ZRI0 2925 aa1.1□□□□□ -2.23
TRAPPC13-212ENST00000520525 ALMS1Q8TCU4 4167 aa1.1□□□□□ -2.23
TRAPPC13-212ENST00000520525 RPL37P61927 97 aaKnown RBP1.09□□□□□ -2.23
TRAPPC13-212ENST00000520525 PRO2289Q9P1D8 64 aa1.09□□□□□ -2.23
TRAPPC13-212ENST00000520525 APCP25054 2843 aa1.09□□□□□ -2.24
TRAPPC13-212ENST00000520525 DSPP15924 2871 aaKnown RBP1.09□□□□□ -2.24
TRAPPC13-212ENST00000520525 ITPR2Q14571 2701 aa1.09□□□□□ -2.24
TRAPPC13-212ENST00000520525 SMG1Q96Q15 3661 aaKnown RBP1.08□□□□□ -2.24
TRAPPC13-212ENST00000520525 HTN3P15516 51 aa1.08□□□□□ -2.24
TRAPPC13-212ENST00000520525 KRTAP20-1Q3LI63 56 aa1.08□□□□□ -2.24
TRAPPC13-212ENST00000520525 PLAC4Q8WY50 150 aa1.08□□□□□ -2.24
TRAPPC13-212ENST00000520525 CACNA1EQ15878 2313 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 DNAH14Q0VDD8 3507 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 DEFB4AO15263 64 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 SPART-AS1P0CW21 52 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 LINC01556Q5JQF7 62 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 SPINK6Q6UWN8 80 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 SPACA4Q8TDM5 124 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 CSPG4Q6UVK1 2322 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 CACNA1HO95180 2353 aa1.07□□□□□ -2.24
TRAPPC13-212ENST00000520525 HERC2O95714 4834 aa1.06□□□□□ -2.24
TRAPPC13-212ENST00000520525 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
TRAPPC13-212ENST00000520525 H3BNG1 76 aa1.06□□□□□ -2.24
TRAPPC13-212ENST00000520525 NBASA2RRP1 2371 aa1.06□□□□□ -2.24
TRAPPC13-212ENST00000520525 ACANP16112 2415 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 SONP18583 2426 aaKnown RBP1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 DCHS2Q6V1P9 2916 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 DEFB135Q30KP9 77 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 UBE2DNLQ8IWF7 75 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 CHD7Q9P2D1 2997 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 APLNQ9ULZ1 77 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 S4R3F8 94 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 ATMQ13315 3056 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 FAT4Q6V0I7 4981 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 APC2O95996 2303 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 AKAP6Q13023 2319 aa1.05□□□□□ -2.24
TRAPPC13-212ENST00000520525 A0A0D9SG42 100 aa1.04□□□□□ -2.24
TRAPPC13-212ENST00000520525 Q6ZRN7 208 aaPredicted RBP1.04□□□□□ -2.24
TRAPPC13-212ENST00000520525 DMXL2Q8TDJ6 3036 aa1.04□□□□□ -2.24
TRAPPC13-212ENST00000520525 ACACAQ13085 2346 aa1.04□□□□□ -2.24
TRAPPC13-212ENST00000520525 ROS1P08922 2347 aa1.03□□□□□ -2.24
TRAPPC13-212ENST00000520525 FLG2Q5D862 2391 aaPredicted RBP1.03□□□□□ -2.24
TRAPPC13-212ENST00000520525 INE1O15225 51 aa1.03□□□□□ -2.24
TRAPPC13-212ENST00000520525 DEFB124Q8NES8 71 aa1.03□□□□□ -2.24
TRAPPC13-212ENST00000520525 MGAQ8IWI9 3026 aa1.03□□□□□ -2.24
TRAPPC13-212ENST00000520525 TRIOO75962 3097 aa1.03□□□□□ -2.24
TRAPPC13-212ENST00000520525 HIVEP1P15822 2718 aa1.02□□□□□ -2.25
TRAPPC13-212ENST00000520525 ADGRG4Q8IZF6 3080 aa1.02□□□□□ -2.25
TRAPPC13-212ENST00000520525 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
TRAPPC13-212ENST00000520525 WDFY3Q8IZQ1 3526 aa1.02□□□□□ -2.25
TRAPPC13-212ENST00000520525 SSPOA2VEC9 5147 aa1□□□□□ -2.25
TRAPPC13-212ENST00000520525 MAP1AP78559 2803 aaPredicted RBP0.99□□□□□ -2.25
TRAPPC13-212ENST00000520525 MYO15AQ9UKN7 3530 aa0.98□□□□□ -2.25
TRAPPC13-212ENST00000520525 NBPF19A0A087WUL8 3843 aa0.98□□□□□ -2.25
TRAPPC13-212ENST00000520525 CENPEQ02224 2701 aa0.98□□□□□ -2.25
TRAPPC13-212ENST00000520525 SVEP1Q4LDE5 3571 aa0.97□□□□□ -2.25
TRAPPC13-212ENST00000520525 CSMD2Q7Z408 3487 aa0.97□□□□□ -2.25
TRAPPC13-212ENST00000520525 SPENQ96T58 3664 aaKnown RBP0.97□□□□□ -2.25
TRAPPC13-212ENST00000520525 CHD9Q3L8U1 2897 aa0.97□□□□□ -2.25
TRAPPC13-212ENST00000520525 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
TRAPPC13-212ENST00000520525 COL7A1Q02388 2944 aa0.95□□□□□ -2.26
TRAPPC13-212ENST00000520525 M0QZ58 72 aa0.95□□□□□ -2.26
TRAPPC13-212ENST00000520525 RNF213Q63HN8 5207 aa0.93□□□□□ -2.26
TRAPPC13-212ENST00000520525 KMT2DO14686 5537 aa0.93□□□□□ -2.26
TRAPPC13-212ENST00000520525 CUBNO60494 3623 aa0.92□□□□□ -2.26
TRAPPC13-212ENST00000520525 Q5VSD8 79 aa0.92□□□□□ -2.26
TRAPPC13-212ENST00000520525 DMDP11532 3685 aa0.92□□□□□ -2.26
TRAPPC13-212ENST00000520525 VPS13DQ5THJ4 4388 aa0.92□□□□□ -2.26
TRAPPC13-212ENST00000520525 C9orf92A6NGG3 77 aa0.91□□□□□ -2.26
TRAPPC13-212ENST00000520525 RPS29P62273 56 aaKnown RBP0.91□□□□□ -2.26
TRAPPC13-212ENST00000520525 HMCN2Q8NDA2 5059 aa0.9□□□□□ -2.27
TRAPPC13-212ENST00000520525 DSTQ03001 7570 aaKnown RBP0.89□□□□□ -2.27
TRAPPC13-212ENST00000520525 LAMA1P25391 3075 aa0.89□□□□□ -2.27
TRAPPC13-212ENST00000520525 HRNRQ86YZ3 2850 aaPredicted RBP0.89□□□□□ -2.27
TRAPPC13-212ENST00000520525 TACC2O95359 2948 aa0.89□□□□□ -2.27
TRAPPC13-212ENST00000520525 SRRM2Q9UQ35 2752 aaKnown RBP0.87□□□□□ -2.27
TRAPPC13-212ENST00000520525 KRTAP10-4P60372 401 aaPredicted RBP0.87□□□□□ -2.27
TRAPPC13-212ENST00000520525 DNAH11Q96DT5 4516 aa0.87□□□□□ -2.27
TRAPPC13-212ENST00000520525 AKAP9Q99996 3911 aa0.86□□□□□ -2.27
TRAPPC13-212ENST00000520525 TNP1P09430 55 aa0.86□□□□□ -2.27
TRAPPC13-212ENST00000520525 SMR3AQ99954 134 aa0.86□□□□□ -2.27
TRAPPC13-212ENST00000520525 KRTAP2-3P0C7H8 128 aa0.85□□□□□ -2.27
TRAPPC13-212ENST00000520525 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
TRAPPC13-212ENST00000520525 KRTAP2-4Q9BYR9 128 aa0.85□□□□□ -2.27
TRAPPC13-212ENST00000520525 DNAH1Q9P2D7 4330 aa0.84□□□□□ -2.27
TRAPPC13-212ENST00000520525 MYCBP2O75592 4640 aa0.83□□□□□ -2.28
TRAPPC13-212ENST00000520525 MUC5ACP98088 5654 aa0.83□□□□□ -2.28
TRAPPC13-212ENST00000520525 LAMA5O15230 3695 aa0.82□□□□□ -2.28
TRAPPC13-212ENST00000520525 VPS13CQ709C8 3753 aa0.82□□□□□ -2.28
TRAPPC13-212ENST00000520525 HUWE1Q7Z6Z7 4374 aaKnown RBP0.82□□□□□ -2.28
TRAPPC13-212ENST00000520525 DNAH8Q96JB1 4490 aa0.81□□□□□ -2.28
TRAPPC13-212ENST00000520525 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms