RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 CRIP1P50238 77 aa-2.9□□□□□ -2.87
NPM1-206ENST00000519955 LEAP2Q969E1 77 aa-2.9□□□□□ -2.87
NPM1-206ENST00000519955 TJP1Q07157 1748 aa-2.91□□□□□ -2.88
NPM1-206ENST00000519955 TTC37Q6PGP7 1564 aa-2.91□□□□□ -2.88
NPM1-206ENST00000519955 RNF17Q9BXT8 1623 aaKnown RBP-2.92□□□□□ -2.88
NPM1-206ENST00000519955 NRAPQ86VF7 1730 aa-2.92□□□□□ -2.88
NPM1-206ENST00000519955 NCBP2-AS2Q69YL0 99 aa-2.92□□□□□ -2.88
NPM1-206ENST00000519955 C6orf48Q9UBA6 75 aa-2.92□□□□□ -2.88
NPM1-206ENST00000519955 INO80Q9ULG1 1556 aaPredicted RBP-2.92□□□□□ -2.88
NPM1-206ENST00000519955 SFTA3P0C7M3 94 aa-2.93□□□□□ -2.88
NPM1-206ENST00000519955 FCER1GP30273 86 aa-2.94□□□□□ -2.88
NPM1-206ENST00000519955 KCNQ1DNQ9H478 68 aa-2.94□□□□□ -2.88
NPM1-206ENST00000519955 WDFY4Q6ZS81 3184 aa-2.95□□□□□ -2.88
NPM1-206ENST00000519955 MUC3AQ02505 3323 aa-2.95□□□□□ -2.88
NPM1-206ENST00000519955 EP400Q96L91 3159 aa-2.96□□□□□ -2.88
NPM1-206ENST00000519955 ARHGAP35Q9NRY4 1499 aa-2.96□□□□□ -2.88
NPM1-206ENST00000519955 CFAP43Q8NDM7 1665 aa-2.97□□□□□ -2.88
NPM1-206ENST00000519955 HFM1A2PYH4 1435 aa-2.97□□□□□ -2.88
NPM1-206ENST00000519955 TDRG1Q3Y452 100 aa-2.98□□□□□ -2.89
NPM1-206ENST00000519955 A0A087WXM4 84 aa-2.99□□□□□ -2.89
NPM1-206ENST00000519955 UBL5Q9BZL1 73 aa-2.99□□□□□ -2.89
NPM1-206ENST00000519955 RICTORQ6R327 1708 aa-2.99□□□□□ -2.89
NPM1-206ENST00000519955 KIF21BO75037 1637 aa-3□□□□□ -2.89
NPM1-206ENST00000519955 UACAQ9BZF9 1416 aa-3□□□□□ -2.89
NPM1-206ENST00000519955 CROCC2H7BZ55 1655 aa-3□□□□□ -2.89
NPM1-206ENST00000519955 DEFB121Q5J5C9 76 aa-3.03□□□□□ -2.89
NPM1-206ENST00000519955 RALGAPBQ86X10 1494 aa-3.03□□□□□ -2.9
NPM1-206ENST00000519955 DCHS1Q96JQ0 3298 aa-3.04□□□□□ -2.9
NPM1-206ENST00000519955 MYO5CQ9NQX4 1742 aa-3.05□□□□□ -2.9
NPM1-206ENST00000519955 DNAH14Q0VDD8 3507 aa-3.05□□□□□ -2.9
NPM1-206ENST00000519955 CEP250Q9BV73 2442 aa-3.05□□□□□ -2.9
NPM1-206ENST00000519955 SMIM13P0DJ93 91 aa-3.05□□□□□ -2.9
NPM1-206ENST00000519955 PREX2Q70Z35 1606 aa-3.05□□□□□ -2.9
NPM1-206ENST00000519955 ETDCA0A1B0GVM5 59 aa-3.06□□□□□ -2.9
NPM1-206ENST00000519955 NHSQ6T4R5 1651 aa-3.06□□□□□ -2.9
NPM1-206ENST00000519955 ASXL1Q8IXJ9 1541 aa-3.06□□□□□ -2.9
NPM1-206ENST00000519955 MKI67P46013 3256 aaKnown RBP-3.07□□□□□ -2.9
NPM1-206ENST00000519955 CLASP1Q7Z460 1538 aa-3.08□□□□□ -2.9
NPM1-206ENST00000519955 KDM5DQ9BY66 1539 aa-3.09□□□□□ -2.9
NPM1-206ENST00000519955 ST20Q9HBF5 79 aa-3.11□□□□□ -2.91
NPM1-206ENST00000519955 FAM208AQ9UK61 1670 aaKnown RBP-3.11□□□□□ -2.91
NPM1-206ENST00000519955 ADIRFQ15847 76 aa-3.14□□□□□ -2.91
NPM1-206ENST00000519955 ABRACLQ9P1F3 81 aa-3.14□□□□□ -2.91
NPM1-206ENST00000519955 KAAG1Q9UBP8 84 aa-3.15□□□□□ -2.91
NPM1-206ENST00000519955 CFAP47Q6ZTR5 3102 aa-3.16□□□□□ -2.91
NPM1-206ENST00000519955 ABCC6O95255 1503 aa-3.17□□□□□ -2.92
NPM1-206ENST00000519955 EIF2AK4Q9P2K8 1649 aaKnown RBP-3.17□□□□□ -2.92
NPM1-206ENST00000519955 ENHOQ6UWT2 76 aa-3.17□□□□□ -2.92
NPM1-206ENST00000519955 USP34Q70CQ2 3546 aa-3.18□□□□□ -2.92
NPM1-206ENST00000519955 DEFB114Q30KQ6 69 aa-3.18□□□□□ -2.92
NPM1-206ENST00000519955 EEA1Q15075 1411 aa-3.19□□□□□ -2.92
NPM1-206ENST00000519955 MROH1Q8NDA8 1641 aa-3.19□□□□□ -2.92
NPM1-206ENST00000519955 DIP2AQ14689 1571 aa-3.21□□□□□ -2.92
NPM1-206ENST00000519955 GLI2P10070 1586 aa-3.21□□□□□ -2.92
NPM1-206ENST00000519955 H3BUT2 72 aa-3.22□□□□□ -2.92
NPM1-206ENST00000519955 RRBP1Q9P2E9 1410 aaKnown RBP-3.22□□□□□ -2.93
NPM1-206ENST00000519955 C3P01024 1663 aa-3.23□□□□□ -2.93
NPM1-206ENST00000519955 S100A13Q99584 98 aa-3.24□□□□□ -2.93
NPM1-206ENST00000519955 ABCC1P33527 1531 aa-3.24□□□□□ -2.93
NPM1-206ENST00000519955 TIAM1Q13009 1591 aa-3.25□□□□□ -2.93
NPM1-206ENST00000519955 POLR2KP53803 58 aaKnown RBP-3.25□□□□□ -2.93
NPM1-206ENST00000519955 SMIM27A0A1W2PRY6 76 aa-3.26□□□□□ -2.93
NPM1-206ENST00000519955 LMTK2Q8IWU2 1503 aa-3.29□□□□□ -2.94
NPM1-206ENST00000519955 DCAF1Q9Y4B6 1507 aa-3.29□□□□□ -2.94
NPM1-206ENST00000519955 UNC80Q8N2C7 3258 aa-3.3□□□□□ -2.94
NPM1-206ENST00000519955 MADDQ8WXG6 1647 aa-3.31□□□□□ -2.94
NPM1-206ENST00000519955 DNAH12Q6ZR08 3092 aa-3.31□□□□□ -2.94
NPM1-206ENST00000519955 WFDC10BQ8IUB3 73 aa-3.32□□□□□ -2.94
NPM1-206ENST00000519955 CFAP74Q9C0B2 1584 aa-3.37□□□□□ -2.95
NPM1-206ENST00000519955 GNG2P59768 71 aa-3.37□□□□□ -2.95
NPM1-206ENST00000519955 TTTY10Q9BZA0 68 aa-3.37□□□□□ -2.95
NPM1-206ENST00000519955 LINC00308Q8TCZ7 52 aa-3.38□□□□□ -2.95
NPM1-206ENST00000519955 TMEM167BQ9NRX6 74 aa-3.38□□□□□ -2.95
NPM1-206ENST00000519955 K7EMI3 77 aa-3.39□□□□□ -2.95
NPM1-206ENST00000519955 DEFB131AP59861 70 aa-3.39□□□□□ -2.95
NPM1-206ENST00000519955 XIRP2A4UGR9 3374 aa-3.4□□□□□ -2.95
NPM1-206ENST00000519955 LOC400499M0QZD8 3231 aa-3.4□□□□□ -2.95
NPM1-206ENST00000519955 ALS2Q96Q42 1657 aa-3.43□□□□□ -2.96
NPM1-206ENST00000519955 H3BVH4 76 aa-3.43□□□□□ -2.96
NPM1-206ENST00000519955 C18orf32Q8TCD1 76 aa-3.43□□□□□ -2.96
NPM1-206ENST00000519955 ANKARQ7Z5J8 1434 aa-3.44□□□□□ -2.96
NPM1-206ENST00000519955 NMES1Q9C002 83 aa-3.44□□□□□ -2.96
NPM1-206ENST00000519955 ASPMQ8IZT6 3477 aa-3.44□□□□□ -2.96
NPM1-206ENST00000519955 CENPFP49454 3210 aa-3.46□□□□□ -2.96
NPM1-206ENST00000519955 CCDC180Q9P1Z9 1646 aa-3.47□□□□□ -2.96
NPM1-206ENST00000519955 MROH2AA6NES4 1674 aa-3.48□□□□□ -2.97
NPM1-206ENST00000519955 ATXN8Q156A1 80 aa-3.48□□□□□ -2.97
NPM1-206ENST00000519955 VCANP13611 3396 aa-3.48□□□□□ -2.97
NPM1-206ENST00000519955 RB1CC1Q8TDY2 1594 aa-3.49□□□□□ -2.97
NPM1-206ENST00000519955 LMO7Q8WWI1 1683 aa-3.49□□□□□ -2.97
NPM1-206ENST00000519955 EFCAB6Q5THR3 1501 aa-3.51□□□□□ -2.97
NPM1-206ENST00000519955 CCDC18Q5T9S5 1454 aa-3.52□□□□□ -2.97
NPM1-206ENST00000519955 NRXN3Q9Y4C0 1643 aa-3.52□□□□□ -2.97
NPM1-206ENST00000519955 M0R1W7 72 aa-3.53□□□□□ -2.97
NPM1-206ENST00000519955 KRTAP19-2Q3LHN2 52 aa-3.53□□□□□ -2.97
NPM1-206ENST00000519955 SCRIBQ14160 1630 aa-3.55□□□□□ -2.98
NPM1-206ENST00000519955 SERF2P84101 59 aa-3.57□□□□□ -2.98
NPM1-206ENST00000519955 CDH23Q9H251 3354 aa-3.57□□□□□ -2.98
NPM1-206ENST00000519955 BRCA2P51587 3418 aa-3.58□□□□□ -2.98
NPM1-206ENST00000519955 SYCP2Q9BX26 1530 aa-3.6□□□□□ -2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms