RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SNCGO76070 127 aa2.17□□□□□ -2.06
CTNNA1-216ENST00000519489 VPS25Q9BRG1 176 aa2.17□□□□□ -2.06
CTNNA1-216ENST00000519489 OCR1Q9BZK8 76 aa2.16□□□□□ -2.06
CTNNA1-216ENST00000519489 UQCC3Q6UW78 93 aa2.15□□□□□ -2.07
CTNNA1-216ENST00000519489 ADM2Q7Z4H4 148 aa2.15□□□□□ -2.07
CTNNA1-216ENST00000519489 MRPL34Q9BQ48 92 aaKnown RBP2.15□□□□□ -2.07
CTNNA1-216ENST00000519489 PCP4L1A6NKN8 68 aa2.13□□□□□ -2.07
CTNNA1-216ENST00000519489 hDV103S1A0JD37 113 aa2.12□□□□□ -2.07
CTNNA1-216ENST00000519489 LINC01554Q52M75 96 aa2.12□□□□□ -2.07
CTNNA1-216ENST00000519489 TMEM254Q8TBM7 123 aa2.12□□□□□ -2.07
CTNNA1-216ENST00000519489 SEC61GP60059 68 aa2.11□□□□□ -2.07
CTNNA1-216ENST00000519489 R4GN34 69 aa2.11□□□□□ -2.07
CTNNA1-216ENST00000519489 MMP24-AS1A0A0U1RRL7 71 aa2.09□□□□□ -2.07
CTNNA1-216ENST00000519489 H0YGX0 51 aa2.08□□□□□ -2.08
CTNNA1-216ENST00000519489 M0QZ58 72 aa2.08□□□□□ -2.08
CTNNA1-216ENST00000519489 P0C880 135 aa2.08□□□□□ -2.08
CTNNA1-216ENST00000519489 TMEM218A2RU14 115 aa2.07□□□□□ -2.08
CTNNA1-216ENST00000519489 SYS1-DBNDD2H3BUS1 97 aa2.07□□□□□ -2.08
CTNNA1-216ENST00000519489 Q6ZQT0 140 aa2.06□□□□□ -2.08
CTNNA1-216ENST00000519489 LINC01545Q5VT33 79 aa2.05□□□□□ -2.08
CTNNA1-216ENST00000519489 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
CTNNA1-216ENST00000519489 HCG22E2RYF7 251 aa2.04□□□□□ -2.08
CTNNA1-216ENST00000519489 NDUFC1O43677 76 aa2.03□□□□□ -2.08
CTNNA1-216ENST00000519489 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
CTNNA1-216ENST00000519489 ORMDL1Q9P0S3 153 aa2.03□□□□□ -2.08
CTNNA1-216ENST00000519489 A0A1B0GX51 115 aa2.02□□□□□ -2.09
CTNNA1-216ENST00000519489 CXCL6P80162 114 aa2.02□□□□□ -2.09
CTNNA1-216ENST00000519489 TMEM256-PLSCR3K7ERE1 68 aa2.01□□□□□ -2.09
CTNNA1-216ENST00000519489 DNAL4O96015 105 aa2.01□□□□□ -2.09
CTNNA1-216ENST00000519489 BATFQ16520 125 aa2□□□□□ -2.09
CTNNA1-216ENST00000519489 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
CTNNA1-216ENST00000519489 ATOH7Q8N100 152 aa2□□□□□ -2.09
CTNNA1-216ENST00000519489 A0A0D9SG42 100 aa1.99□□□□□ -2.09
CTNNA1-216ENST00000519489 H3BQ85 93 aa1.99□□□□□ -2.09
CTNNA1-216ENST00000519489 C9JAW5 83 aa1.98□□□□□ -2.09
CTNNA1-216ENST00000519489 HIST1H4GQ99525 98 aa1.97□□□□□ -2.09
CTNNA1-216ENST00000519489 A0A1W2PPM0 123 aa1.96□□□□□ -2.1
CTNNA1-216ENST00000519489 KRTDAPP60985 99 aa1.96□□□□□ -2.1
CTNNA1-216ENST00000519489 C20orf197Q8N268 126 aa1.96□□□□□ -2.1
CTNNA1-216ENST00000519489 SNAPINO95295 136 aa1.95□□□□□ -2.1
CTNNA1-216ENST00000519489 NREPQ16612 68 aa1.95□□□□□ -2.1
CTNNA1-216ENST00000519489 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
CTNNA1-216ENST00000519489 YPEL4Q96NS1 127 aa1.95□□□□□ -2.1
CTNNA1-216ENST00000519489 MT-ATP8P03928 68 aa1.94□□□□□ -2.1
CTNNA1-216ENST00000519489 C10orf95Q9H7T3 257 aa1.94□□□□□ -2.1
CTNNA1-216ENST00000519489 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
CTNNA1-216ENST00000519489 APOC3P02656 99 aa1.93□□□□□ -2.1
CTNNA1-216ENST00000519489 CLLU1Q5K131 121 aa1.93□□□□□ -2.1
CTNNA1-216ENST00000519489 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
CTNNA1-216ENST00000519489 K7EP34 96 aa1.92□□□□□ -2.1
CTNNA1-216ENST00000519489 CEND1Q8N111 149 aa1.91□□□□□ -2.1
CTNNA1-216ENST00000519489 A0A0B4J2C4 111 aa1.9□□□□□ -2.11
CTNNA1-216ENST00000519489 MT1AP04731 61 aa1.9□□□□□ -2.11
CTNNA1-216ENST00000519489 COA6Q5JTJ3 125 aaKnown RBP1.9□□□□□ -2.11
CTNNA1-216ENST00000519489 Q8N9L7 120 aa1.89□□□□□ -2.11
CTNNA1-216ENST00000519489 A0A1B0GW54 56 aa1.88□□□□□ -2.11
CTNNA1-216ENST00000519489 PSMB2P49721 201 aa1.88□□□□□ -2.11
CTNNA1-216ENST00000519489 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
CTNNA1-216ENST00000519489 SVBPQ8N300 66 aa1.88□□□□□ -2.11
CTNNA1-216ENST00000519489 PRO1854Q9UHT4 67 aa1.88□□□□□ -2.11
CTNNA1-216ENST00000519489 NDUFA5Q16718 116 aa1.86□□□□□ -2.11
CTNNA1-216ENST00000519489 NAA38Q9BRA0 125 aaKnown RBP1.86□□□□□ -2.11
CTNNA1-216ENST00000519489 CYP4F30PQ9H0H9 118 aa1.86□□□□□ -2.11
CTNNA1-216ENST00000519489 HSBP1L1C9JCN9 74 aa1.85□□□□□ -2.11
CTNNA1-216ENST00000519489 BPY2O14599 106 aa1.85□□□□□ -2.11
CTNNA1-216ENST00000519489 ACYP1P07311 99 aa1.85□□□□□ -2.11
CTNNA1-216ENST00000519489 BAALC-AS2P0C853 105 aa1.85□□□□□ -2.11
CTNNA1-216ENST00000519489 LOC110117498A0A087WWA1 95 aa1.84□□□□□ -2.11
CTNNA1-216ENST00000519489 COX6CP09669 75 aa1.84□□□□□ -2.11
CTNNA1-216ENST00000519489 C14orf132Q9NPU4 83 aa1.83□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BKO60814 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BJP06899 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BOP23527 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BBP33778 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BDP58876 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BCP62807 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST2H2BEQ16778 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BHQ93079 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BNQ99877 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BMQ99879 126 aa1.82□□□□□ -2.12
CTNNA1-216ENST00000519489 JMJD7-PLA2G4BH0Y9G9 81 aa1.81□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST3H2BBQ8N257 126 aa1.81□□□□□ -2.12
CTNNA1-216ENST00000519489 TP53AIP1Q9HCN2 124 aa1.79□□□□□ -2.12
CTNNA1-216ENST00000519489 SCGB1C2P0DMR2 95 aa1.78□□□□□ -2.12
CTNNA1-216ENST00000519489 HIST1H2BLQ99880 126 aa1.78□□□□□ -2.12
CTNNA1-216ENST00000519489 TRAV22A0A0B4J277 110 aa1.77□□□□□ -2.13
CTNNA1-216ENST00000519489 COX8AP10176 69 aa1.77□□□□□ -2.13
CTNNA1-216ENST00000519489 FXYD2P54710 66 aa1.77□□□□□ -2.13
CTNNA1-216ENST00000519489 HIGD1BQ9P298 99 aa1.77□□□□□ -2.13
CTNNA1-216ENST00000519489 V9GYY9 64 aa1.77□□□□□ -2.13
CTNNA1-216ENST00000519489 SMIM26A0A096LP01 95 aa1.76□□□□□ -2.13
CTNNA1-216ENST00000519489 K7ERJ3 54 aa1.76□□□□□ -2.13
CTNNA1-216ENST00000519489 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
CTNNA1-216ENST00000519489 C14orf144Q96I85 54 aa1.74□□□□□ -2.13
CTNNA1-216ENST00000519489 DLEU1O43261 78 aa1.73□□□□□ -2.13
CTNNA1-216ENST00000519489 ATXN8Q156A1 80 aa1.71□□□□□ -2.14
CTNNA1-216ENST00000519489 FAM240AA0A1B0GVK7 77 aa1.7□□□□□ -2.14
CTNNA1-216ENST00000519489 PSPHP1O15172 72 aa1.7□□□□□ -2.14
CTNNA1-216ENST00000519489 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms