RNA–Protein interactions for RNA: ENST00000518963.5

PSD3-208, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-208ENST00000518963 M0QY20 66 aa0.57□□□□□ -2.32
PSD3-208ENST00000518963 CELSR1Q9NYQ6 3014 aa0.57□□□□□ -2.32
PSD3-208ENST00000518963 SPENQ96T58 3664 aaKnown RBP0.57□□□□□ -2.32
PSD3-208ENST00000518963 LPAP08519 4548 aa0.57□□□□□ -2.32
PSD3-208ENST00000518963 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 LRP1Q07954 4544 aaKnown RBP0.56□□□□□ -2.32
PSD3-208ENST00000518963 SPG11Q96JI7 2443 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 TACC2O95359 2948 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 CSMD2Q7Z408 3487 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 MTORP42345 2549 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 MMP24-AS1A0A0U1RRL7 71 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 SPRR2DP22532 72 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 CSMD1Q96PZ7 3565 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 NF1P21359 2839 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 CSPG4Q6UVK1 2322 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 PCNX1Q96RV3 2341 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 SYNE2Q8WXH0 6885 aaKnown RBP0.56□□□□□ -2.32
PSD3-208ENST00000518963 NBEAL1Q6ZS30 2694 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 ADGRG4Q8IZF6 3080 aa0.56□□□□□ -2.32
PSD3-208ENST00000518963 TLN1Q9Y490 2541 aaKnown RBP0.56□□□□□ -2.32
PSD3-208ENST00000518963 USP9YO00507 2555 aaPredicted RBP0.55□□□□□ -2.32
PSD3-208ENST00000518963 DCHS2Q6V1P9 2916 aa0.55□□□□□ -2.32
PSD3-208ENST00000518963 MYCBP2O75592 4640 aa0.55□□□□□ -2.32
PSD3-208ENST00000518963 ANKHD1Q8IWZ3 2542 aaKnown RBP0.55□□□□□ -2.32
PSD3-208ENST00000518963 DEFB133Q30KQ1 61 aa0.55□□□□□ -2.32
PSD3-208ENST00000518963 HIVEP1P15822 2718 aa0.55□□□□□ -2.32
PSD3-208ENST00000518963 TGP01266 2768 aa0.55□□□□□ -2.32
PSD3-208ENST00000518963 CCDC168Q8NDH2 2452 aa0.55□□□□□ -2.32
PSD3-208ENST00000518963 AKAP9Q99996 3911 aa0.55□□□□□ -2.32
PSD3-208ENST00000518963 STAB1Q9NY15 2570 aa0.54□□□□□ -2.32
PSD3-208ENST00000518963 PKD1L1Q8TDX9 2849 aa0.54□□□□□ -2.32
PSD3-208ENST00000518963 VPS13CQ709C8 3753 aa0.54□□□□□ -2.32
PSD3-208ENST00000518963 A8MTW9 85 aa0.54□□□□□ -2.32
PSD3-208ENST00000518963 DSTQ03001 7570 aaKnown RBP0.54□□□□□ -2.32
PSD3-208ENST00000518963 NEBP20929 6669 aa0.53□□□□□ -2.32
PSD3-208ENST00000518963 NBEAL2Q6ZNJ1 2754 aa0.53□□□□□ -2.32
PSD3-208ENST00000518963 ACANP16112 2415 aa0.53□□□□□ -2.32
PSD3-208ENST00000518963 SONP18583 2426 aaKnown RBP0.53□□□□□ -2.32
PSD3-208ENST00000518963 HIVEP3Q5T1R4 2406 aa0.53□□□□□ -2.32
PSD3-208ENST00000518963 H3BNG1 76 aa0.53□□□□□ -2.32
PSD3-208ENST00000518963 COL6A5A8TX70 2615 aa0.53□□□□□ -2.32
PSD3-208ENST00000518963 MXRA5Q9NR99 2828 aa0.53□□□□□ -2.32
PSD3-208ENST00000518963 CUBNO60494 3623 aa0.53□□□□□ -2.32
PSD3-208ENST00000518963 KIAA1109Q2LD37 5005 aa0.53□□□□□ -2.33
PSD3-208ENST00000518963 TLN2Q9Y4G6 2542 aa0.53□□□□□ -2.33
PSD3-208ENST00000518963 FLNAP21333 2647 aaKnown RBP0.52□□□□□ -2.33
PSD3-208ENST00000518963 VPS13BQ7Z7G8 4022 aa0.52□□□□□ -2.33
PSD3-208ENST00000518963 STATHP02808 62 aa0.51□□□□□ -2.33
PSD3-208ENST00000518963 SPRR2BP35325 72 aa0.51□□□□□ -2.33
PSD3-208ENST00000518963 MGAM2Q2M2H8 2515 aa0.5□□□□□ -2.33
PSD3-208ENST00000518963 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
PSD3-208ENST00000518963 NSD1Q96L73 2696 aaPredicted RBP0.5□□□□□ -2.33
PSD3-208ENST00000518963 DEFB110Q30KQ9 67 aa0.5□□□□□ -2.33
PSD3-208ENST00000518963 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
PSD3-208ENST00000518963 COL7A1Q02388 2944 aa0.5□□□□□ -2.33
PSD3-208ENST00000518963 LYSTQ99698 3801 aa0.5□□□□□ -2.33
PSD3-208ENST00000518963 DNHD1Q96M86 4753 aa0.5□□□□□ -2.33
PSD3-208ENST00000518963 ZANQ9Y493 2812 aa0.5□□□□□ -2.33
PSD3-208ENST00000518963 SVEP1Q4LDE5 3571 aa0.49□□□□□ -2.33
PSD3-208ENST00000518963 TENM2Q9NT68 2774 aa0.49□□□□□ -2.33
PSD3-208ENST00000518963 CMYA5Q8N3K9 4069 aa0.49□□□□□ -2.33
PSD3-208ENST00000518963 WNK1Q9H4A3 2382 aa0.48□□□□□ -2.33
PSD3-208ENST00000518963 TRRAPQ9Y4A5 3859 aa0.48□□□□□ -2.33
PSD3-208ENST00000518963 M0QZ58 72 aa0.48□□□□□ -2.33
PSD3-208ENST00000518963 TNP1P09430 55 aa0.48□□□□□ -2.33
PSD3-208ENST00000518963 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
PSD3-208ENST00000518963 ANK3Q12955 4377 aaKnown RBP0.48□□□□□ -2.33
PSD3-208ENST00000518963 STAB2Q8WWQ8 2551 aa0.47□□□□□ -2.33
PSD3-208ENST00000518963 SNRPGP62308 76 aaKnown RBP0.47□□□□□ -2.33
PSD3-208ENST00000518963 PKD1P98161 4303 aa0.46□□□□□ -2.34
PSD3-208ENST00000518963 HECTD4Q9Y4D8 3996 aa0.46□□□□□ -2.34
PSD3-208ENST00000518963 KMT2DO14686 5537 aa0.46□□□□□ -2.34
PSD3-208ENST00000518963 DEFB108AA8MXU0 73 aa0.46□□□□□ -2.34
PSD3-208ENST00000518963 COX14Q96I36 57 aa0.46□□□□□ -2.34
PSD3-208ENST00000518963 RYR3Q15413 4870 aa0.46□□□□□ -2.34
PSD3-208ENST00000518963 DNAH3Q8TD57 4116 aa0.46□□□□□ -2.34
PSD3-208ENST00000518963 KMT2CQ8NEZ4 4911 aaKnown RBP0.45□□□□□ -2.34
PSD3-208ENST00000518963 H3BSH0 61 aa0.45□□□□□ -2.34
PSD3-208ENST00000518963 RYR2Q92736 4967 aa0.45□□□□□ -2.34
PSD3-208ENST00000518963 EPPK1P58107 5090 aaKnown RBP0.45□□□□□ -2.34
PSD3-208ENST00000518963 SRRM2Q9UQ35 2752 aaKnown RBP0.45□□□□□ -2.34
PSD3-208ENST00000518963 KRTAP20-1Q3LI63 56 aa0.44□□□□□ -2.34
PSD3-208ENST00000518963 DEFB108BQ8NET1 73 aa0.44□□□□□ -2.34
PSD3-208ENST00000518963 DYNC2H1Q8NCM8 4307 aaKnown RBP0.44□□□□□ -2.34
PSD3-208ENST00000518963 RYR1P21817 5038 aa0.44□□□□□ -2.34
PSD3-208ENST00000518963 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
PSD3-208ENST00000518963 DNAH7Q8WXX0 4024 aa0.43□□□□□ -2.34
PSD3-208ENST00000518963 DNAH1Q9P2D7 4330 aa0.43□□□□□ -2.34
PSD3-208ENST00000518963 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
PSD3-208ENST00000518963 BIRC6Q9NR09 4857 aa0.43□□□□□ -2.34
PSD3-208ENST00000518963 DNAH9Q9NYC9 4486 aa0.43□□□□□ -2.34
PSD3-208ENST00000518963 H3BUX3 64 aa0.43□□□□□ -2.34
PSD3-208ENST00000518963 POLR2KP53803 58 aaKnown RBP0.43□□□□□ -2.34
PSD3-208ENST00000518963 SACSQ9NZJ4 4579 aa0.42□□□□□ -2.34
PSD3-208ENST00000518963 HYDINQ4G0P3 5121 aa0.42□□□□□ -2.34
PSD3-208ENST00000518963 PKHD1P08F94 4074 aa0.42□□□□□ -2.34
PSD3-208ENST00000518963 SMR3BP02814 79 aaPredicted RBP0.42□□□□□ -2.34
PSD3-208ENST00000518963 SPRR2AP35326 72 aa0.42□□□□□ -2.34
PSD3-208ENST00000518963 DEFB136Q30KP8 78 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms