RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 NDUFC1O43677 76 aa0.1□□□□□ -2.39
SMN1-210ENST00000518504 MPC2O95563 127 aa0.1□□□□□ -2.39
SMN1-210ENST00000518504 HMGN2P05204 90 aaKnown RBP0.1□□□□□ -2.39
SMN1-210ENST00000518504 DEFB1P60022 68 aa0.1□□□□□ -2.39
SMN1-210ENST00000518504 MT1LQ93083 61 aa0.1□□□□□ -2.39
SMN1-210ENST00000518504 RHPN1-AS1Q9BWJ2 59 aa0.1□□□□□ -2.39
SMN1-210ENST00000518504 TRBV6-1A0A0K0K1D8 114 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 A0A1B0GWA3 101 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 H7BZZ5 65 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 NDUFA4O00483 81 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 APELAP0DMC3 54 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 RPS29P62273 56 aaKnown RBP0.09□□□□□ -2.4
SMN1-210ENST00000518504 KRTAP6-1Q3LI64 71 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 PIGYQ3MUY2 71 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 ENHOQ6UWT2 76 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 PRO1933Q9H354 126 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 NOP10Q9NPE3 64 aaKnown RBP0.09□□□□□ -2.4
SMN1-210ENST00000518504 CACFD1Q9UGQ2 172 aa0.09□□□□□ -2.4
SMN1-210ENST00000518504 TIMM8BQ9Y5J9 83 aaPredicted RBP0.09□□□□□ -2.4
SMN1-210ENST00000518504 TRBV25-1A0A075B6N4 114 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 A0A0G2JND7 137 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 TRBV7-4A0A0J9YYF1 115 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 LINC00959A0A1B0GUT2 108 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 H0YAA0 97 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 SPINK4O60575 86 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 PMCHL2Q9BQD1 86 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 DPY30Q9C005 99 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 AP4S1Q9Y587 144 aa0.08□□□□□ -2.4
SMN1-210ENST00000518504 A0A087WVE0 104 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 C9orf92A6NGG3 77 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 M0R143 59 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 ATOX1O00244 68 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 CFDP00746 253 aaPredicted RBP0.07□□□□□ -2.4
SMN1-210ENST00000518504 MT1AP04731 61 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 S100A8P05109 93 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 LINC00032P0C843 101 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 SPRR1AP35321 89 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 PSMG4Q5JS54 123 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 RPS27LQ71UM5 84 aaKnown RBP0.07□□□□□ -2.4
SMN1-210ENST00000518504 SERP2Q8N6R1 65 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 TRGV9Q99603 122 aa0.07□□□□□ -2.4
SMN1-210ENST00000518504 TRBV7-7A0A0K0K1E9 115 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 C7orf77A4D0Y5 90 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 K7EIM0 57 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 PMCHL1Q16048 86 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 KRTAP19-5Q3LI72 72 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 RPL39P5Q59GN2 51 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 SNHG12Q9BXW3 62 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 TTTY10Q9BZA0 68 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 RABAC1Q9UI14 185 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 UBE2D4Q9Y2X8 147 aa0.06□□□□□ -2.4
SMN1-210ENST00000518504 FXYD6-FXYD2A0A087WZ82 144 aa0.05□□□□□ -2.4
SMN1-210ENST00000518504 SYS1-DBNDD2H3BUS1 97 aa0.05□□□□□ -2.4
SMN1-210ENST00000518504 K7EQZ3 153 aa0.05□□□□□ -2.4
SMN1-210ENST00000518504 SFTA3P0C7M3 94 aa0.05□□□□□ -2.4
SMN1-210ENST00000518504 RPS27P42677 84 aaKnown RBP0.05□□□□□ -2.4
SMN1-210ENST00000518504 PLGLAQ15195 96 aa0.05□□□□□ -2.4
SMN1-210ENST00000518504 TMEM167AQ8TBQ9 72 aa0.05□□□□□ -2.4
SMN1-210ENST00000518504 V9GYS6 101 aa0.05□□□□□ -2.4
SMN1-210ENST00000518504 CYB5AP00167 134 aa0.04□□□□□ -2.4
SMN1-210ENST00000518504 SPRR1BP22528 89 aa0.04□□□□□ -2.4
SMN1-210ENST00000518504 PKIAP61925 76 aa0.04□□□□□ -2.4
SMN1-210ENST00000518504 PRCDQ00LT1 54 aa0.04□□□□□ -2.4
SMN1-210ENST00000518504 WT1-ASQ06250 92 aa0.04□□□□□ -2.4
SMN1-210ENST00000518504 COL5A1-AS1Q5SY13 56 aa0.04□□□□□ -2.4
SMN1-210ENST00000518504 LINC01590Q5TEZ4 76 aa0.04□□□□□ -2.4
SMN1-210ENST00000518504 VAMP8Q9BV40 100 aa0.04□□□□□ -2.4
SMN1-210ENST00000518504 A0A087WWC5 75 aa0.03□□□□□ -2.4
SMN1-210ENST00000518504 A0A1B0GU69 56 aa0.03□□□□□ -2.4
SMN1-210ENST00000518504 H0Y9P7 68 aa0.03□□□□□ -2.4
SMN1-210ENST00000518504 H3BQF6 201 aa0.03□□□□□ -2.4
SMN1-210ENST00000518504 HTN1P15515 57 aa0.03□□□□□ -2.4
SMN1-210ENST00000518504 HMGN3Q15651 99 aa0.03□□□□□ -2.4
SMN1-210ENST00000518504 C6orf201Q7Z4U5 140 aa0.03□□□□□ -2.4
SMN1-210ENST00000518504 DEFB107AQ8IZN7 70 aa0.03□□□□□ -2.4
SMN1-210ENST00000518504 CPSF4LA6NMK7 179 aaKnown RBP0.02□□□□□ -2.41
SMN1-210ENST00000518504 ARMS2P0C7Q2 107 aa0.02□□□□□ -2.41
SMN1-210ENST00000518504 FAUP35544 74 aaKnown RBP0.02□□□□□ -2.41
SMN1-210ENST00000518504 RPL38P63173 70 aaKnown RBP0.02□□□□□ -2.41
SMN1-210ENST00000518504 CLPSL2Q6UWE3 100 aa0.02□□□□□ -2.41
SMN1-210ENST00000518504 PRLHP81277 87 aa0.01□□□□□ -2.41
SMN1-210ENST00000518504 CRIPTQ9P021 101 aa0.01□□□□□ -2.41
SMN1-210ENST00000518504 F8WEM9 126 aa0□□□□□ -2.41
SMN1-210ENST00000518504 PRM1P04553 51 aa0□□□□□ -2.41
SMN1-210ENST00000518504 ETDBQ3ZM63 59 aa0□□□□□ -2.41
SMN1-210ENST00000518504 PSENENQ9NZ42 101 aa0□□□□□ -2.41
SMN1-210ENST00000518504 HIGD1BQ9P298 99 aa0□□□□□ -2.41
SMN1-210ENST00000518504 C6orf48Q9UBA6 75 aa0□□□□□ -2.41
SMN1-210ENST00000518504 COX8AP10176 69 aa-0.01□□□□□ -2.41
SMN1-210ENST00000518504 SNRPGP62308 76 aaKnown RBP-0.01□□□□□ -2.41
SMN1-210ENST00000518504 GNGT1P63211 74 aa-0.01□□□□□ -2.41
SMN1-210ENST00000518504 H1FX-AS1Q4G0G2 97 aa-0.01□□□□□ -2.41
SMN1-210ENST00000518504 ALKAL2Q6UX46 152 aa-0.01□□□□□ -2.41
SMN1-210ENST00000518504 C20orf78Q9BR46 151 aa-0.01□□□□□ -2.41
SMN1-210ENST00000518504 DEFB105AQ8NG35 78 aa-0.02□□□□□ -2.41
SMN1-210ENST00000518504 ARHGAP5-AS1Q96IT6 56 aa-0.02□□□□□ -2.41
SMN1-210ENST00000518504 D6R8Y8 96 aa-0.03□□□□□ -2.41
SMN1-210ENST00000518504 LEPROTL1O95214 131 aa-0.03□□□□□ -2.41
SMN1-210ENST00000518504 IGLC2P0DOY2 106 aa-0.03□□□□□ -2.41
SMN1-210ENST00000518504 CRIP1P50238 77 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms