RNA–Protein interactions for RNA: ENST00000518209.1

CDH12-204, Transcript of cadherin 12, humanhuman

TSL 3

Gene CDH12, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-204ENST00000518209 TNP1P09430 55 aa0.73□□□□□ -2.29
CDH12-204ENST00000518209 APC2O95996 2303 aa0.73□□□□□ -2.29
CDH12-204ENST00000518209 PLECQ15149 4684 aaKnown RBP0.73□□□□□ -2.29
CDH12-204ENST00000518209 USP9YO00507 2555 aaPredicted RBP0.73□□□□□ -2.29
CDH12-204ENST00000518209 DNAH5Q8TE73 4624 aa0.73□□□□□ -2.29
CDH12-204ENST00000518209 NIPBLQ6KC79 2804 aaeCLIP0.72□□□□□ -2.29
CDH12-204ENST00000518209 HIVEP1P15822 2718 aa0.72□□□□□ -2.29
CDH12-204ENST00000518209 DMBT1Q9UGM3 2413 aaPredicted RBP0.72□□□□□ -2.29
CDH12-204ENST00000518209 H0YGG7 62 aa0.72□□□□□ -2.29
CDH12-204ENST00000518209 EPG5Q9HCE0 2579 aa0.72□□□□□ -2.29
CDH12-204ENST00000518209 LPAP08519 4548 aa0.72□□□□□ -2.29
CDH12-204ENST00000518209 CSMD2Q7Z408 3487 aa0.72□□□□□ -2.29
CDH12-204ENST00000518209 USP34Q70CQ2 3546 aa0.71□□□□□ -2.3
CDH12-204ENST00000518209 NBEAL2Q6ZNJ1 2754 aa0.7□□□□□ -2.3
CDH12-204ENST00000518209 DYNC1H1Q14204 4646 aaKnown RBP0.7□□□□□ -2.3
CDH12-204ENST00000518209 COX14Q96I36 57 aa0.7□□□□□ -2.3
CDH12-204ENST00000518209 FAT1Q14517 4588 aa0.7□□□□□ -2.3
CDH12-204ENST00000518209 CREBBPQ92793 2442 aa0.7□□□□□ -2.3
CDH12-204ENST00000518209 VPS13CQ709C8 3753 aa0.7□□□□□ -2.3
CDH12-204ENST00000518209 LAMA3Q16787 3333 aa0.7□□□□□ -2.3
CDH12-204ENST00000518209 GCN1Q92616 2671 aaKnown RBP0.7□□□□□ -2.3
CDH12-204ENST00000518209 CCDC168Q8NDH2 2452 aa0.7□□□□□ -2.3
CDH12-204ENST00000518209 ZANQ9Y493 2812 aa0.7□□□□□ -2.3
CDH12-204ENST00000518209 LAMA2P24043 3122 aaKnown RBP0.69□□□□□ -2.3
CDH12-204ENST00000518209 APELAP0DMC3 54 aa0.69□□□□□ -2.3
CDH12-204ENST00000518209 DEFB1P60022 68 aa0.69□□□□□ -2.3
CDH12-204ENST00000518209 U3KQA8 63 aa0.69□□□□□ -2.3
CDH12-204ENST00000518209 CHD8Q9HCK8 2581 aa0.69□□□□□ -2.3
CDH12-204ENST00000518209 NBASA2RRP1 2371 aa0.68□□□□□ -2.3
CDH12-204ENST00000518209 KRTAP8-1Q8IUC2 63 aa0.68□□□□□ -2.3
CDH12-204ENST00000518209 DEFB124Q8NES8 71 aa0.68□□□□□ -2.3
CDH12-204ENST00000518209 RHPN1-AS1Q9BWJ2 59 aa0.68□□□□□ -2.3
CDH12-204ENST00000518209 SVEP1Q4LDE5 3571 aa0.68□□□□□ -2.3
CDH12-204ENST00000518209 MAP1AP78559 2803 aaPredicted RBP0.68□□□□□ -2.3
CDH12-204ENST00000518209 SETXQ7Z333 2677 aaKnown RBP0.68□□□□□ -2.3
CDH12-204ENST00000518209 UTP20O75691 2785 aaKnown RBP0.68□□□□□ -2.3
CDH12-204ENST00000518209 EP400Q96L91 3159 aa0.67□□□□□ -2.3
CDH12-204ENST00000518209 MXRA5Q9NR99 2828 aa0.67□□□□□ -2.3
CDH12-204ENST00000518209 MAP1BP46821 2468 aaKnown RBP0.67□□□□□ -2.3
CDH12-204ENST00000518209 HRNRQ86YZ3 2850 aaPredicted RBP0.67□□□□□ -2.3
CDH12-204ENST00000518209 STAB1Q9NY15 2570 aa0.67□□□□□ -2.3
CDH12-204ENST00000518209 MUC17Q685J3 4493 aa0.66□□□□□ -2.3
CDH12-204ENST00000518209 ADGRG4Q8IZF6 3080 aa0.66□□□□□ -2.3
CDH12-204ENST00000518209 GPR98Q8WXG9 6306 aa0.66□□□□□ -2.3
CDH12-204ENST00000518209 CEP250Q9BV73 2442 aa0.66□□□□□ -2.3
CDH12-204ENST00000518209 ASPMQ8IZT6 3477 aa0.66□□□□□ -2.3
CDH12-204ENST00000518209 ANKRD11Q6UB99 2663 aaPredicted RBP0.65□□□□□ -2.3
CDH12-204ENST00000518209 ITPR1Q14643 2758 aa0.65□□□□□ -2.3
CDH12-204ENST00000518209 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
CDH12-204ENST00000518209 LAMA1P25391 3075 aa0.65□□□□□ -2.31
CDH12-204ENST00000518209 PRM1P04553 51 aa0.65□□□□□ -2.31
CDH12-204ENST00000518209 PCNTO95613 3336 aa0.65□□□□□ -2.31
CDH12-204ENST00000518209 RIF1Q5UIP0 2472 aaKnown RBP0.64□□□□□ -2.31
CDH12-204ENST00000518209 STATHP02808 62 aa0.64□□□□□ -2.31
CDH12-204ENST00000518209 SPART-AS1P0CW21 52 aa0.64□□□□□ -2.31
CDH12-204ENST00000518209 BRCA2P51587 3418 aa0.64□□□□□ -2.31
CDH12-204ENST00000518209 FAM186AA6NE01 2351 aa0.63□□□□□ -2.31
CDH12-204ENST00000518209 CACNA1AO00555 2505 aa0.63□□□□□ -2.31
CDH12-204ENST00000518209 NCOR2Q9Y618 2525 aa0.63□□□□□ -2.31
CDH12-204ENST00000518209 HIVEP3Q5T1R4 2406 aa0.63□□□□□ -2.31
CDH12-204ENST00000518209 LRP1BQ9NZR2 4599 aa0.63□□□□□ -2.31
CDH12-204ENST00000518209 UNC80Q8N2C7 3258 aa0.63□□□□□ -2.31
CDH12-204ENST00000518209 FLNBO75369 2602 aaKnown RBP0.63□□□□□ -2.31
CDH12-204ENST00000518209 PTPN13Q12923 2485 aa0.62□□□□□ -2.31
CDH12-204ENST00000518209 ITPR2Q14571 2701 aa0.62□□□□□ -2.31
CDH12-204ENST00000518209 MYO15AQ9UKN7 3530 aa0.62□□□□□ -2.31
CDH12-204ENST00000518209 LRRK2Q5S007 2527 aa0.62□□□□□ -2.31
CDH12-204ENST00000518209 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
CDH12-204ENST00000518209 H3BNG1 76 aa0.61□□□□□ -2.31
CDH12-204ENST00000518209 CENPFP49454 3210 aa0.61□□□□□ -2.31
CDH12-204ENST00000518209 WDFY3Q8IZQ1 3526 aa0.61□□□□□ -2.31
CDH12-204ENST00000518209 VCANP13611 3396 aa0.6□□□□□ -2.31
CDH12-204ENST00000518209 HTN1P15515 57 aa0.6□□□□□ -2.31
CDH12-204ENST00000518209 DEFB136Q30KP8 78 aa0.6□□□□□ -2.31
CDH12-204ENST00000518209 HERC1Q15751 4861 aa0.6□□□□□ -2.31
CDH12-204ENST00000518209 ACANP16112 2415 aa0.59□□□□□ -2.31
CDH12-204ENST00000518209 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.31
CDH12-204ENST00000518209 TEX15Q9BXT5 2789 aa0.59□□□□□ -2.31
CDH12-204ENST00000518209 MT1AP04731 61 aa0.59□□□□□ -2.31
CDH12-204ENST00000518209 RPS29P62273 56 aaKnown RBP0.59□□□□□ -2.31
CDH12-204ENST00000518209 TGP01266 2768 aa0.59□□□□□ -2.32
CDH12-204ENST00000518209 EYSQ5T1H1 3165 aa0.59□□□□□ -2.32
CDH12-204ENST00000518209 MTORP42345 2549 aa0.59□□□□□ -2.32
CDH12-204ENST00000518209 A0A096LNI7 61 aa0.58□□□□□ -2.32
CDH12-204ENST00000518209 DEFB110Q30KQ9 67 aa0.58□□□□□ -2.32
CDH12-204ENST00000518209 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
CDH12-204ENST00000518209 Q9Y3F1 56 aa0.58□□□□□ -2.32
CDH12-204ENST00000518209 USP9XQ93008 2570 aaPredicted RBP0.57□□□□□ -2.32
CDH12-204ENST00000518209 SMR3BP02814 79 aaPredicted RBP0.57□□□□□ -2.32
CDH12-204ENST00000518209 SPRR2DP22532 72 aa0.57□□□□□ -2.32
CDH12-204ENST00000518209 KRTAP19-5Q3LI72 72 aa0.57□□□□□ -2.32
CDH12-204ENST00000518209 LINC01556Q5JQF7 62 aa0.57□□□□□ -2.32
CDH12-204ENST00000518209 CFAP46Q8IYW2 2715 aa0.57□□□□□ -2.32
CDH12-204ENST00000518209 ANKHD1Q8IWZ3 2542 aaKnown RBP0.57□□□□□ -2.32
CDH12-204ENST00000518209 TEP1Q99973 2627 aaKnown RBP0.56□□□□□ -2.32
CDH12-204ENST00000518209 SPG11Q96JI7 2443 aa0.56□□□□□ -2.32
CDH12-204ENST00000518209 ACACBO00763 2458 aa0.56□□□□□ -2.32
CDH12-204ENST00000518209 SPRR2BP35325 72 aa0.56□□□□□ -2.32
CDH12-204ENST00000518209 LRP2P98164 4655 aa0.56□□□□□ -2.32
CDH12-204ENST00000518209 STARD9Q9P2P6 4700 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms