RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 M0QY20 66 aa0.83□□□□□ -2.28
CPNE3-204ENST00000517862 GNGT2O14610 69 aa0.83□□□□□ -2.28
CPNE3-204ENST00000517862 SPINK7P58062 85 aa0.83□□□□□ -2.28
CPNE3-204ENST00000517862 PPP1R1CQ8WVI7 109 aa0.83□□□□□ -2.28
CPNE3-204ENST00000517862 C14orf144Q96I85 54 aa0.83□□□□□ -2.28
CPNE3-204ENST00000517862 SIX6O95475 246 aa0.82□□□□□ -2.28
CPNE3-204ENST00000517862 SVBPQ8N300 66 aa0.82□□□□□ -2.28
CPNE3-204ENST00000517862 PIGBOS1A0A0B4J2F0 54 aa0.81□□□□□ -2.28
CPNE3-204ENST00000517862 IAPPP10997 89 aa0.81□□□□□ -2.28
CPNE3-204ENST00000517862 KRTAP19-5Q3LI72 72 aa0.81□□□□□ -2.28
CPNE3-204ENST00000517862 GTF2H5Q6ZYL4 71 aa0.81□□□□□ -2.28
CPNE3-204ENST00000517862 C8orf59Q8N0T1 100 aaPredicted RBP0.81□□□□□ -2.28
CPNE3-204ENST00000517862 SPANXDQ9BXN6 97 aa0.81□□□□□ -2.28
CPNE3-204ENST00000517862 AP4S1Q9Y587 144 aa0.81□□□□□ -2.28
CPNE3-204ENST00000517862 ETDCA0A1B0GVM5 59 aa0.8□□□□□ -2.28
CPNE3-204ENST00000517862 MGPP08493 103 aa0.8□□□□□ -2.28
CPNE3-204ENST00000517862 SPINK8P0C7L1 97 aa0.8□□□□□ -2.28
CPNE3-204ENST00000517862 IFITM1P13164 125 aa0.8□□□□□ -2.28
CPNE3-204ENST00000517862 PPP1R17O96001 155 aa0.79□□□□□ -2.28
CPNE3-204ENST00000517862 ACYP2P14621 99 aa0.79□□□□□ -2.28
CPNE3-204ENST00000517862 HSD52Q0P140 79 aa0.79□□□□□ -2.28
CPNE3-204ENST00000517862 TCEAL7Q9BRU2 100 aa0.79□□□□□ -2.28
CPNE3-204ENST00000517862 PRO1933Q9H354 126 aa0.79□□□□□ -2.28
CPNE3-204ENST00000517862 A0A0D9SG42 100 aa0.78□□□□□ -2.28
CPNE3-204ENST00000517862 GNG11P61952 73 aa0.78□□□□□ -2.28
CPNE3-204ENST00000517862 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
CPNE3-204ENST00000517862 TRAV1-2A0A0B4J238 106 aa0.77□□□□□ -2.29
CPNE3-204ENST00000517862 F2Z2F3 143 aa0.77□□□□□ -2.29
CPNE3-204ENST00000517862 ALKAL2Q6UX46 152 aa0.77□□□□□ -2.29
CPNE3-204ENST00000517862 TOMM7Q9P0U1 55 aa0.77□□□□□ -2.29
CPNE3-204ENST00000517862 UBE2L5PA0A1B0GUS4 154 aa0.76□□□□□ -2.29
CPNE3-204ENST00000517862 SSSCA1O60232 199 aa0.76□□□□□ -2.29
CPNE3-204ENST00000517862 UBE2L3P68036 154 aaKnown RBP0.76□□□□□ -2.29
CPNE3-204ENST00000517862 MGST2Q99735 147 aa0.76□□□□□ -2.29
CPNE3-204ENST00000517862 TMEM218A2RU14 115 aa0.75□□□□□ -2.29
CPNE3-204ENST00000517862 F8VRH5 84 aa0.75□□□□□ -2.29
CPNE3-204ENST00000517862 FAM213BQ8TBF2 198 aa0.75□□□□□ -2.29
CPNE3-204ENST00000517862 CYP4F30PQ9H0H9 118 aa0.75□□□□□ -2.29
CPNE3-204ENST00000517862 SPRR1AP35321 89 aa0.74□□□□□ -2.29
CPNE3-204ENST00000517862 Q6ZRX8 168 aa0.74□□□□□ -2.29
CPNE3-204ENST00000517862 SMIM11BQ8TCY0 68 aa0.74□□□□□ -2.29
CPNE3-204ENST00000517862 FAM167A-AS1Q96KT0 104 aa0.74□□□□□ -2.29
CPNE3-204ENST00000517862 MT1AP04731 61 aa0.73□□□□□ -2.29
CPNE3-204ENST00000517862 SMIM6P0DI80 62 aa0.73□□□□□ -2.29
CPNE3-204ENST00000517862 SFTA2Q6UW10 78 aa0.73□□□□□ -2.29
CPNE3-204ENST00000517862 BAGE3Q86Y29 109 aa0.73□□□□□ -2.29
CPNE3-204ENST00000517862 SCP2D1Q9UJQ7 156 aa0.73□□□□□ -2.29
CPNE3-204ENST00000517862 V9GYH0 126 aa0.73□□□□□ -2.29
CPNE3-204ENST00000517862 CTXND1A0A1B0GTU2 59 aa0.72□□□□□ -2.29
CPNE3-204ENST00000517862 CHKB-CPT1BH3BT56 60 aa0.72□□□□□ -2.29
CPNE3-204ENST00000517862 SPRR1BP22528 89 aa0.72□□□□□ -2.29
CPNE3-204ENST00000517862 CRIP1P50238 77 aa0.72□□□□□ -2.29
CPNE3-204ENST00000517862 C7orf77A4D0Y5 90 aa0.71□□□□□ -2.3
CPNE3-204ENST00000517862 F8WEM9 126 aa0.71□□□□□ -2.3
CPNE3-204ENST00000517862 I3L3M4 83 aa0.71□□□□□ -2.3
CPNE3-204ENST00000517862 MPC2O95563 127 aa0.71□□□□□ -2.3
CPNE3-204ENST00000517862 GCHFRP30047 84 aa0.71□□□□□ -2.3
CPNE3-204ENST00000517862 ATP5EP56381 51 aaPredicted RBP0.71□□□□□ -2.3
CPNE3-204ENST00000517862 Q8IZM0 81 aa0.71□□□□□ -2.3
CPNE3-204ENST00000517862 PRR15LQ9BU68 103 aa0.71□□□□□ -2.3
CPNE3-204ENST00000517862 MANBALQ9NQG1 85 aa0.71□□□□□ -2.3
CPNE3-204ENST00000517862 hADV29S1A0JD25 119 aa0.7□□□□□ -2.3
CPNE3-204ENST00000517862 KCNQ1DNQ9H478 68 aa0.7□□□□□ -2.3
CPNE3-204ENST00000517862 M0R143 59 aa0.69□□□□□ -2.3
CPNE3-204ENST00000517862 RPL39LQ96EH5 51 aaKnown RBP0.69□□□□□ -2.3
CPNE3-204ENST00000517862 PSENENQ9NZ42 101 aa0.69□□□□□ -2.3
CPNE3-204ENST00000517862 TRAV22A0A0B4J277 110 aa0.68□□□□□ -2.3
CPNE3-204ENST00000517862 D6R8Y8 96 aa0.68□□□□□ -2.3
CPNE3-204ENST00000517862 MT-ATP8P03928 68 aa0.68□□□□□ -2.3
CPNE3-204ENST00000517862 TMEM170BQ5T4T1 132 aa0.68□□□□□ -2.3
CPNE3-204ENST00000517862 NAP1L6A6NFF2 107 aa0.67□□□□□ -2.3
CPNE3-204ENST00000517862 PDCD5O14737 125 aa0.67□□□□□ -2.3
CPNE3-204ENST00000517862 BAGE2Q86Y30 109 aa0.67□□□□□ -2.3
CPNE3-204ENST00000517862 UQCR10Q9UDW1 63 aa0.67□□□□□ -2.3
CPNE3-204ENST00000517862 SEC11AP67812 179 aa0.66□□□□□ -2.3
CPNE3-204ENST00000517862 AMELXQ99217 191 aa0.66□□□□□ -2.3
CPNE3-204ENST00000517862 LINC01558Q9Y6Z2 57 aa0.66□□□□□ -2.3
CPNE3-204ENST00000517862 S4R3F8 94 aa0.66□□□□□ -2.3
CPNE3-204ENST00000517862 UQCR11O14957 56 aa0.65□□□□□ -2.31
CPNE3-204ENST00000517862 SFT2D2O95562 160 aa0.65□□□□□ -2.31
CPNE3-204ENST00000517862 S100A8P05109 93 aa0.65□□□□□ -2.31
CPNE3-204ENST00000517862 KRTDAPP60985 99 aa0.65□□□□□ -2.31
CPNE3-204ENST00000517862 PRO1854Q9UHT4 67 aa0.65□□□□□ -2.31
CPNE3-204ENST00000517862 FCER1GP30273 86 aa0.64□□□□□ -2.31
CPNE3-204ENST00000517862 SPATA8Q6RVD6 105 aa0.64□□□□□ -2.31
CPNE3-204ENST00000517862 SMIM4Q8WVI0 70 aa0.64□□□□□ -2.31
CPNE3-204ENST00000517862 PMCHL2Q9BQD1 86 aa0.64□□□□□ -2.31
CPNE3-204ENST00000517862 SNHG12Q9BXW3 62 aa0.64□□□□□ -2.31
CPNE3-204ENST00000517862 LINC00472Q9H8W2 130 aa0.64□□□□□ -2.31
CPNE3-204ENST00000517862 NXT2Q9NPJ8 142 aaKnown RBP0.64□□□□□ -2.31
CPNE3-204ENST00000517862 TRBV7-7A0A0K0K1E9 115 aa0.63□□□□□ -2.31
CPNE3-204ENST00000517862 ZNF815PA8K554 130 aa0.63□□□□□ -2.31
CPNE3-204ENST00000517862 APOC3P02656 99 aa0.63□□□□□ -2.31
CPNE3-204ENST00000517862 DEFB105AQ8NG35 78 aa0.63□□□□□ -2.31
CPNE3-204ENST00000517862 COL5A1-AS1Q5SY13 56 aa0.62□□□□□ -2.31
CPNE3-204ENST00000517862 DEFB107AQ8IZN7 70 aa0.62□□□□□ -2.31
CPNE3-204ENST00000517862 ST20Q9HBF5 79 aa0.62□□□□□ -2.31
CPNE3-204ENST00000517862 COX6CP09669 75 aa0.61□□□□□ -2.31
CPNE3-204ENST00000517862 FAUP35544 74 aaKnown RBP0.6□□□□□ -2.31
CPNE3-204ENST00000517862 RPL39P62891 51 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms