RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 F8W1H4 67 aa1.54□□□□□ -2.16
SKP1-204ENST00000517691 CCKP06307 115 aa1.54□□□□□ -2.16
SKP1-204ENST00000517691 ATP5EP56381 51 aaPredicted RBP1.54□□□□□ -2.16
SKP1-204ENST00000517691 LCE1FQ5T754 118 aa1.54□□□□□ -2.16
SKP1-204ENST00000517691 H3BUT2 72 aa1.54□□□□□ -2.16
SKP1-204ENST00000517691 MIR22HGQ0VDD5 57 aa1.54□□□□□ -2.16
SKP1-204ENST00000517691 SPTSSBQ8NFR3 76 aa1.54□□□□□ -2.16
SKP1-204ENST00000517691 PPDPFLQ8WWR9 84 aa1.54□□□□□ -2.16
SKP1-204ENST00000517691 ORMDL1Q9P0S3 153 aa1.54□□□□□ -2.16
SKP1-204ENST00000517691 TRBV7-7A0A0K0K1E9 115 aa1.53□□□□□ -2.16
SKP1-204ENST00000517691 ATXN8Q156A1 80 aa1.53□□□□□ -2.16
SKP1-204ENST00000517691 Q6JHZ5 121 aa1.53□□□□□ -2.16
SKP1-204ENST00000517691 LIMD2Q9BT23 127 aa1.53□□□□□ -2.16
SKP1-204ENST00000517691 R4GN34 69 aa1.53□□□□□ -2.16
SKP1-204ENST00000517691 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 BAALC-AS2P0C853 105 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 DSCR10P59022 87 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 RPS29P62273 56 aaKnown RBP1.52□□□□□ -2.17
SKP1-204ENST00000517691 IGFL1Q6UW32 110 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 SPCS1Q9Y6A9 102 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 HMCN2Q8NDA2 5059 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 ATOX1O00244 68 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 Q1T7F1 81 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 TMEM254Q8TBM7 123 aa1.52□□□□□ -2.17
SKP1-204ENST00000517691 A0A087WSZ3 146 aa1.51□□□□□ -2.17
SKP1-204ENST00000517691 A0A1W2PPM0 123 aa1.51□□□□□ -2.17
SKP1-204ENST00000517691 HCG22E2RYF7 251 aa1.5□□□□□ -2.17
SKP1-204ENST00000517691 ETDBQ3ZM63 59 aa1.5□□□□□ -2.17
SKP1-204ENST00000517691 C9orf92A6NGG3 77 aa1.5□□□□□ -2.17
SKP1-204ENST00000517691 A8MU10 97 aa1.5□□□□□ -2.17
SKP1-204ENST00000517691 TPRXLQ17RH7 258 aa1.5□□□□□ -2.17
SKP1-204ENST00000517691 SERP2Q8N6R1 65 aa1.5□□□□□ -2.17
SKP1-204ENST00000517691 RNF213Q63HN8 5207 aa1.5□□□□□ -2.17
SKP1-204ENST00000517691 TRBV7-4A0A0J9YYF1 115 aa1.49□□□□□ -2.17
SKP1-204ENST00000517691 A0A1W2PNM2 257 aa1.49□□□□□ -2.17
SKP1-204ENST00000517691 JMJD7-PLA2G4BH0Y9G9 81 aa1.49□□□□□ -2.17
SKP1-204ENST00000517691 KRTAP13-3Q3SY46 172 aa1.49□□□□□ -2.17
SKP1-204ENST00000517691 HRES1P13985 223 aa1.49□□□□□ -2.17
SKP1-204ENST00000517691 CSAG1Q6PB30 78 aa1.49□□□□□ -2.17
SKP1-204ENST00000517691 IGKV4-1P06312 121 aa1.48□□□□□ -2.17
SKP1-204ENST00000517691 PDE6GP18545 87 aa1.48□□□□□ -2.17
SKP1-204ENST00000517691 SPINT4Q6UDR6 99 aa1.48□□□□□ -2.17
SKP1-204ENST00000517691 OBSCN-AS1Q96MR7 158 aa1.48□□□□□ -2.17
SKP1-204ENST00000517691 CDC42SE1Q9NRR8 79 aa1.48□□□□□ -2.17
SKP1-204ENST00000517691 LRP2P98164 4655 aa1.48□□□□□ -2.17
SKP1-204ENST00000517691 LPAP08519 4548 aa1.48□□□□□ -2.17
SKP1-204ENST00000517691 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
SKP1-204ENST00000517691 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
SKP1-204ENST00000517691 PRO2289Q9P1D8 64 aa1.47□□□□□ -2.17
SKP1-204ENST00000517691 LOC110117498A0A087WWA1 95 aa1.47□□□□□ -2.17
SKP1-204ENST00000517691 H7BZZ5 65 aa1.47□□□□□ -2.17
SKP1-204ENST00000517691 NREPQ16612 68 aa1.47□□□□□ -2.17
SKP1-204ENST00000517691 Q96NJ1 140 aa1.47□□□□□ -2.17
SKP1-204ENST00000517691 PRO0461Q9UI25 63 aa1.47□□□□□ -2.17
SKP1-204ENST00000517691 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
SKP1-204ENST00000517691 MUC2Q02817 5179 aa1.46□□□□□ -2.18
SKP1-204ENST00000517691 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
SKP1-204ENST00000517691 NDUFB1O75438 58 aa1.45□□□□□ -2.18
SKP1-204ENST00000517691 Q5VV11 94 aa1.45□□□□□ -2.18
SKP1-204ENST00000517691 CYP4F30PQ9H0H9 118 aa1.45□□□□□ -2.18
SKP1-204ENST00000517691 LINC00472Q9H8W2 130 aa1.45□□□□□ -2.18
SKP1-204ENST00000517691 TRAV22A0A0B4J277 110 aa1.45□□□□□ -2.18
SKP1-204ENST00000517691 LCE3CQ5T5A8 94 aa1.45□□□□□ -2.18
SKP1-204ENST00000517691 NDUFC1O43677 76 aa1.44□□□□□ -2.18
SKP1-204ENST00000517691 RPL37P61927 97 aaKnown RBP1.44□□□□□ -2.18
SKP1-204ENST00000517691 CHKB-CPT1BH3BT56 60 aa1.44□□□□□ -2.18
SKP1-204ENST00000517691 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
SKP1-204ENST00000517691 UBL5Q9BZL1 73 aa1.44□□□□□ -2.18
SKP1-204ENST00000517691 IGKV3D-7A0A0C4DH55 119 aa1.43□□□□□ -2.18
SKP1-204ENST00000517691 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
SKP1-204ENST00000517691 LINC00846Q9NV44 126 aa1.43□□□□□ -2.18
SKP1-204ENST00000517691 K7EQZ3 153 aa1.42□□□□□ -2.18
SKP1-204ENST00000517691 Q8N9L7 120 aa1.42□□□□□ -2.18
SKP1-204ENST00000517691 KLKP1Q107X0 134 aa1.42□□□□□ -2.18
SKP1-204ENST00000517691 COX6B2Q6YFQ2 88 aa1.41□□□□□ -2.18
SKP1-204ENST00000517691 C20orf197Q8N268 126 aa1.41□□□□□ -2.18
SKP1-204ENST00000517691 DMAC1Q96GE9 116 aa1.41□□□□□ -2.18
SKP1-204ENST00000517691 MMP24-AS1A0A0U1RRL7 71 aa1.4□□□□□ -2.18
SKP1-204ENST00000517691 ACYP1P07311 99 aa1.4□□□□□ -2.18
SKP1-204ENST00000517691 WFDC13Q8IUB5 93 aa1.4□□□□□ -2.18
SKP1-204ENST00000517691 ZCCHC13Q8WW36 166 aaKnown RBP1.4□□□□□ -2.18
SKP1-204ENST00000517691 MRPL34Q9BQ48 92 aaKnown RBP1.4□□□□□ -2.18
SKP1-204ENST00000517691 MUC17Q685J3 4493 aa1.4□□□□□ -2.19
SKP1-204ENST00000517691 LINC00643Q86TS7 51 aa1.4□□□□□ -2.19
SKP1-204ENST00000517691 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
SKP1-204ENST00000517691 M0R2T5 61 aa1.39□□□□□ -2.19
SKP1-204ENST00000517691 LOC101927531A0A1B0GV80 90 aa1.39□□□□□ -2.19
SKP1-204ENST00000517691 SPINK7P58062 85 aa1.39□□□□□ -2.19
SKP1-204ENST00000517691 ATP5EP2Q5VTU8 51 aa1.37□□□□□ -2.19
SKP1-204ENST00000517691 FAT4Q6V0I7 4981 aa1.37□□□□□ -2.19
SKP1-204ENST00000517691 KRTAP19-2Q3LHN2 52 aa1.37□□□□□ -2.19
SKP1-204ENST00000517691 TP53AIP1Q9HCN2 124 aa1.37□□□□□ -2.19
SKP1-204ENST00000517691 A0A087WVE0 104 aa1.36□□□□□ -2.19
SKP1-204ENST00000517691 MT1HP80294 61 aa1.36□□□□□ -2.19
SKP1-204ENST00000517691 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
SKP1-204ENST00000517691 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.19
SKP1-204ENST00000517691 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.19
SKP1-204ENST00000517691 H0Y9P7 68 aa1.33□□□□□ -2.2
SKP1-204ENST00000517691 H1FX-AS1Q4G0G2 97 aa1.33□□□□□ -2.2
SKP1-204ENST00000517691 LINC00208Q96KT6 92 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms