RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 CRIPTQ9P021 101 aa1.68□□□□□ -2.14
CTNNA1-202ENST00000517533 TRRAPQ9Y4A5 3859 aa1.67□□□□□ -2.14
CTNNA1-202ENST00000517533 DEFB131BA0A096LNP1 70 aa1.67□□□□□ -2.14
CTNNA1-202ENST00000517533 IGIPA6NJ69 53 aa1.67□□□□□ -2.14
CTNNA1-202ENST00000517533 NREPQ16612 68 aa1.67□□□□□ -2.14
CTNNA1-202ENST00000517533 NBEAL1Q6ZS30 2694 aa1.67□□□□□ -2.14
CTNNA1-202ENST00000517533 MGAM2Q2M2H8 2515 aa1.67□□□□□ -2.14
CTNNA1-202ENST00000517533 NOTCH1P46531 2555 aa1.66□□□□□ -2.14
CTNNA1-202ENST00000517533 A0A096LPF7 62 aa1.66□□□□□ -2.14
CTNNA1-202ENST00000517533 COX6A2Q02221 97 aa1.66□□□□□ -2.14
CTNNA1-202ENST00000517533 LELP1Q5T871 98 aa1.66□□□□□ -2.14
CTNNA1-202ENST00000517533 ANK2Q01484 3957 aa1.64□□□□□ -2.15
CTNNA1-202ENST00000517533 UBL5Q9BZL1 73 aa1.64□□□□□ -2.15
CTNNA1-202ENST00000517533 CDKN2A-AS1Q9UH64 79 aa1.64□□□□□ -2.15
CTNNA1-202ENST00000517533 LCE6AA0A183 80 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 K7EQZ3 153 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 NDUFA1O15239 70 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 LINC01556Q5JQF7 62 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 CLPSL2Q6UWE3 100 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 ENHOQ6UWT2 76 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 WFDC10BQ8IUB3 73 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 TOMM7Q9P0U1 55 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 APLNQ9ULZ1 77 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 CMYA5Q8N3K9 4069 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 MEGF8Q7Z7M0 2845 aa1.62□□□□□ -2.15
CTNNA1-202ENST00000517533 TENM3Q9P273 2699 aa1.61□□□□□ -2.15
CTNNA1-202ENST00000517533 LINC00158P58513 81 aa1.61□□□□□ -2.15
CTNNA1-202ENST00000517533 Q8IZM0 81 aa1.61□□□□□ -2.15
CTNNA1-202ENST00000517533 DNAH3Q8TD57 4116 aa1.61□□□□□ -2.15
CTNNA1-202ENST00000517533 COL7A1Q02388 2944 aa1.6□□□□□ -2.15
CTNNA1-202ENST00000517533 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
CTNNA1-202ENST00000517533 STAB2Q8WWQ8 2551 aa1.6□□□□□ -2.15
CTNNA1-202ENST00000517533 LINC00308Q8TCZ7 52 aa1.59□□□□□ -2.15
CTNNA1-202ENST00000517533 DNHD1Q96M86 4753 aa1.59□□□□□ -2.16
CTNNA1-202ENST00000517533 TENM2Q9NT68 2774 aa1.58□□□□□ -2.16
CTNNA1-202ENST00000517533 HUWE1Q7Z6Z7 4374 aaKnown RBP1.57□□□□□ -2.16
CTNNA1-202ENST00000517533 C6orf48Q9UBA6 75 aa1.57□□□□□ -2.16
CTNNA1-202ENST00000517533 DNAH9Q9NYC9 4486 aa1.57□□□□□ -2.16
CTNNA1-202ENST00000517533 TGP01266 2768 aa1.57□□□□□ -2.16
CTNNA1-202ENST00000517533 FBN3Q75N90 2809 aa1.57□□□□□ -2.16
CTNNA1-202ENST00000517533 CSMD3Q7Z407 3707 aa1.54□□□□□ -2.16
CTNNA1-202ENST00000517533 PLECQ15149 4684 aaKnown RBP1.53□□□□□ -2.16
CTNNA1-202ENST00000517533 ETDCA0A1B0GVM5 59 aa1.53□□□□□ -2.16
CTNNA1-202ENST00000517533 PRKDCP78527 4128 aaKnown RBP1.53□□□□□ -2.16
CTNNA1-202ENST00000517533 DYNC2H1Q8NCM8 4307 aaKnown RBP1.53□□□□□ -2.16
CTNNA1-202ENST00000517533 KCNQ1DNQ9H478 68 aa1.53□□□□□ -2.16
CTNNA1-202ENST00000517533 DNAH7Q8WXX0 4024 aa1.52□□□□□ -2.17
CTNNA1-202ENST00000517533 A0A096LNI7 61 aa1.52□□□□□ -2.17
CTNNA1-202ENST00000517533 STARD9Q9P2P6 4700 aa1.51□□□□□ -2.17
CTNNA1-202ENST00000517533 VPS13DQ5THJ4 4388 aa1.5□□□□□ -2.17
CTNNA1-202ENST00000517533 DNAH1Q9P2D7 4330 aa1.5□□□□□ -2.17
CTNNA1-202ENST00000517533 SPRR1AP35321 89 aa1.5□□□□□ -2.17
CTNNA1-202ENST00000517533 LYSTQ99698 3801 aa1.5□□□□□ -2.17
CTNNA1-202ENST00000517533 MRPL34Q9BQ48 92 aaKnown RBP1.5□□□□□ -2.17
CTNNA1-202ENST00000517533 DEFB105AQ8NG35 78 aa1.49□□□□□ -2.17
CTNNA1-202ENST00000517533 PRLHP81277 87 aa1.48□□□□□ -2.17
CTNNA1-202ENST00000517533 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
CTNNA1-202ENST00000517533 DNAH10Q8IVF4 4471 aa1.48□□□□□ -2.17
CTNNA1-202ENST00000517533 IGLV5-48A0A075B6I7 105 aa1.47□□□□□ -2.17
CTNNA1-202ENST00000517533 DNAH2Q9P225 4427 aa1.47□□□□□ -2.17
CTNNA1-202ENST00000517533 ALMS1Q8TCU4 4167 aa1.46□□□□□ -2.18
CTNNA1-202ENST00000517533 KMT2AQ03164 3969 aa1.46□□□□□ -2.18
CTNNA1-202ENST00000517533 SPRR1BP22528 89 aa1.46□□□□□ -2.18
CTNNA1-202ENST00000517533 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.18
CTNNA1-202ENST00000517533 Q5VSD8 79 aa1.45□□□□□ -2.18
CTNNA1-202ENST00000517533 HECTD4Q9Y4D8 3996 aa1.45□□□□□ -2.18
CTNNA1-202ENST00000517533 HYDINQ4G0P3 5121 aa1.45□□□□□ -2.18
CTNNA1-202ENST00000517533 DNAH6Q9C0G6 4158 aa1.45□□□□□ -2.18
CTNNA1-202ENST00000517533 SRRM2Q9UQ35 2752 aaKnown RBP1.44□□□□□ -2.18
CTNNA1-202ENST00000517533 SPINK6Q6UWN8 80 aa1.44□□□□□ -2.18
CTNNA1-202ENST00000517533 PKD1P98161 4303 aa1.44□□□□□ -2.18
CTNNA1-202ENST00000517533 SACSQ9NZJ4 4579 aa1.44□□□□□ -2.18
CTNNA1-202ENST00000517533 RYR2Q92736 4967 aa1.43□□□□□ -2.18
CTNNA1-202ENST00000517533 DNAH11Q96DT5 4516 aa1.43□□□□□ -2.18
CTNNA1-202ENST00000517533 SMR3BP02814 79 aaPredicted RBP1.43□□□□□ -2.18
CTNNA1-202ENST00000517533 KMT2CQ8NEZ4 4911 aaKnown RBP1.43□□□□□ -2.18
CTNNA1-202ENST00000517533 FRAS1Q86XX4 4008 aa1.43□□□□□ -2.18
CTNNA1-202ENST00000517533 FAT2Q9NYQ8 4349 aa1.42□□□□□ -2.18
CTNNA1-202ENST00000517533 DNAH5Q8TE73 4624 aa1.41□□□□□ -2.18
CTNNA1-202ENST00000517533 SPINK1P00995 79 aa1.41□□□□□ -2.18
CTNNA1-202ENST00000517533 DNAH8Q96JB1 4490 aa1.41□□□□□ -2.18
CTNNA1-202ENST00000517533 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.18
CTNNA1-202ENST00000517533 RYR3Q15413 4870 aa1.4□□□□□ -2.19
CTNNA1-202ENST00000517533 DYNC1H1Q14204 4646 aaKnown RBP1.4□□□□□ -2.19
CTNNA1-202ENST00000517533 KRTAP4-1Q9BYQ7 146 aa1.4□□□□□ -2.19
CTNNA1-202ENST00000517533 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
CTNNA1-202ENST00000517533 WFDC13Q8IUB5 93 aa1.39□□□□□ -2.19
CTNNA1-202ENST00000517533 PKHD1P08F94 4074 aa1.38□□□□□ -2.19
CTNNA1-202ENST00000517533 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
CTNNA1-202ENST00000517533 VPS13BQ7Z7G8 4022 aa1.37□□□□□ -2.19
CTNNA1-202ENST00000517533 APOBP04114 4563 aaKnown RBP1.37□□□□□ -2.19
CTNNA1-202ENST00000517533 RYR1P21817 5038 aa1.36□□□□□ -2.19
CTNNA1-202ENST00000517533 FAT1Q14517 4588 aa1.35□□□□□ -2.19
CTNNA1-202ENST00000517533 MMP24-AS1A0A0U1RRL7 71 aa1.35□□□□□ -2.19
CTNNA1-202ENST00000517533 EPPK1P58107 5090 aaKnown RBP1.35□□□□□ -2.19
CTNNA1-202ENST00000517533 KIAA1109Q2LD37 5005 aa1.35□□□□□ -2.19
CTNNA1-202ENST00000517533 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.19
CTNNA1-202ENST00000517533 HSPG2P98160 4391 aa1.33□□□□□ -2.2
CTNNA1-202ENST00000517533 C9orf92A6NGG3 77 aa1.32□□□□□ -2.2
CTNNA1-202ENST00000517533 MT1HL1P0DM35 61 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms